RNA–Protein interactions for RNA: ENST00000523200.5

TNIP1-217, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene TNIP1, Length 1,743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-217ENST00000523200 HAND2P61296 217 aa18.74■□□□□ 0.59
TNIP1-217ENST00000523200 CHAF1AQ13111 956 aaPredicted RBP18.74■□□□□ 0.59
TNIP1-217ENST00000523200 COL9A3Q14050 684 aaPredicted RBP18.74■□□□□ 0.59
TNIP1-217ENST00000523200 ME3Q16798 604 aa18.74■□□□□ 0.59
TNIP1-217ENST00000523200 NAA16Q6N069 864 aaPredicted RBP18.74■□□□□ 0.59
TNIP1-217ENST00000523200 Q6ZUG5 572 aa18.74■□□□□ 0.59
TNIP1-217ENST00000523200 WDR66Q8TBY9 1149 aa18.74■□□□□ 0.59
TNIP1-217ENST00000523200 MASTLQ96GX5 879 aa18.74■□□□□ 0.59
TNIP1-217ENST00000523200 A0A0G2JLW4 131 aa18.73■□□□□ 0.59
TNIP1-217ENST00000523200 MCM4P33991 863 aa18.73■□□□□ 0.59
TNIP1-217ENST00000523200 IFNL3Q8IZI9 196 aa18.73■□□□□ 0.59
TNIP1-217ENST00000523200 TDRD7Q8NHU6 1098 aaKnown RBP18.73■□□□□ 0.59
TNIP1-217ENST00000523200 NAPBQ9H115 298 aa18.73■□□□□ 0.59
TNIP1-217ENST00000523200 TMX4Q9H1E5 349 aaPredicted RBP18.73■□□□□ 0.59
TNIP1-217ENST00000523200 ATP6V0A2Q9Y487 856 aa18.73■□□□□ 0.59
TNIP1-217ENST00000523200 ANKRD31Q8N7Z5 1873 aa18.73■□□□□ 0.59
TNIP1-217ENST00000523200 MAGEB6P1A0A0J9YX57 407 aa18.72■□□□□ 0.59
TNIP1-217ENST00000523200 LARGE1O95461 756 aa18.72■□□□□ 0.59
TNIP1-217ENST00000523200 EXOSC10Q01780 885 aaKnown RBP18.72■□□□□ 0.59
TNIP1-217ENST00000523200 TRDNQ13061 729 aa18.72■□□□□ 0.59
TNIP1-217ENST00000523200 LCORLQ8N3X6 602 aa18.72■□□□□ 0.59
TNIP1-217ENST00000523200 MIGA1Q8NAN2 632 aa18.72■□□□□ 0.59
TNIP1-217ENST00000523200 NCOA7Q8NI08 942 aa18.72■□□□□ 0.59
TNIP1-217ENST00000523200 SMC3Q9UQE7 1217 aa18.72■□□□□ 0.59
TNIP1-217ENST00000523200 SLC4A4Q9Y6R1 1079 aa18.72■□□□□ 0.59
TNIP1-217ENST00000523200 SALL1Q9NSC2 1324 aa18.72■□□□□ 0.59
TNIP1-217ENST00000523200 MYH13Q9UKX3 1938 aa18.72■□□□□ 0.59
TNIP1-217ENST00000523200 RALYLQ86SE5 291 aaKnown RBP18.71■□□□□ 0.59
TNIP1-217ENST00000523200 CCDC83Q8IWF9 413 aa18.71■□□□□ 0.59
TNIP1-217ENST00000523200 TBC1D16Q8TBP0 767 aa18.71■□□□□ 0.59
TNIP1-217ENST00000523200 DDX11L8A8MPP1 907 aa18.71■□□□□ 0.59
TNIP1-217ENST00000523200 CLEC17AQ6ZS10 378 aa18.71■□□□□ 0.59
TNIP1-217ENST00000523200 SLC51AQ86UW1 340 aa18.71■□□□□ 0.59
TNIP1-217ENST00000523200 NSUN4Q96CB9 384 aaKnown RBP18.71■□□□□ 0.59
TNIP1-217ENST00000523200 QSER1Q2KHR3 1735 aa18.71■□□□□ 0.59
TNIP1-217ENST00000523200 GSG1L2A8MUP6 293 aa18.7■□□□□ 0.58
TNIP1-217ENST00000523200 C6orf229H3BNL8 230 aa18.7■□□□□ 0.58
TNIP1-217ENST00000523200 MCM5P33992 734 aa18.7■□□□□ 0.58
TNIP1-217ENST00000523200 ADGRA1Q86SQ6 560 aa18.7■□□□□ 0.58
TNIP1-217ENST00000523200 FBXL16Q8N461 479 aa18.7■□□□□ 0.58
TNIP1-217ENST00000523200 AGXT2Q9BYV1 514 aa18.7■□□□□ 0.58
TNIP1-217ENST00000523200 CD209Q9NNX6 404 aa18.7■□□□□ 0.58
TNIP1-217ENST00000523200 POLLQ9UGP5 575 aa18.7■□□□□ 0.58
TNIP1-217ENST00000523200 H0YIN7 160 aa18.69■□□□□ 0.58
TNIP1-217ENST00000523200 IL1R1P14778 569 aa18.69■□□□□ 0.58
TNIP1-217ENST00000523200 TDO2P48775 406 aa18.69■□□□□ 0.58
TNIP1-217ENST00000523200 MECOMQ03112 1051 aa18.69■□□□□ 0.58
TNIP1-217ENST00000523200 PKP1Q13835 747 aa18.69■□□□□ 0.58
TNIP1-217ENST00000523200 DEFB132Q7Z7B7 95 aa18.69■□□□□ 0.58
TNIP1-217ENST00000523200 BRF1Q92994 677 aa18.69■□□□□ 0.58
TNIP1-217ENST00000523200 EPB41L4AQ9HCS5 686 aaPredicted RBP18.69■□□□□ 0.58
TNIP1-217ENST00000523200 DZIP1Q86YF9 867 aaKnown RBP18.69■□□□□ 0.58
TNIP1-217ENST00000523200 NECAB1Q8N987 351 aa18.69■□□□□ 0.58
TNIP1-217ENST00000523200 GPR101Q96P66 508 aaPredicted RBP18.69■□□□□ 0.58
TNIP1-217ENST00000523200 RIOK1Q9BRS2 568 aaKnown RBP18.69■□□□□ 0.58
TNIP1-217ENST00000523200 WDR19Q8NEZ3 1342 aa18.68■□□□□ 0.58
TNIP1-217ENST00000523200 LRRC37AA6NMS7 1700 aa18.68■□□□□ 0.58
TNIP1-217ENST00000523200 CACNA1SQ13698 1873 aa18.68■□□□□ 0.58
TNIP1-217ENST00000523200 GOLGA6L22H0YM25 854 aa18.68■□□□□ 0.58
TNIP1-217ENST00000523200 PRKAB2O43741 272 aa18.68■□□□□ 0.58
TNIP1-217ENST00000523200 LDHBP07195 334 aaKnown RBP18.68■□□□□ 0.58
TNIP1-217ENST00000523200 PDIA4P13667 645 aaKnown RBP18.68■□□□□ 0.58
TNIP1-217ENST00000523200 PTMSP20962 102 aa18.68■□□□□ 0.58
TNIP1-217ENST00000523200 PRDX5P30044 214 aa18.68■□□□□ 0.58
TNIP1-217ENST00000523200 STYK1Q6J9G0 422 aa18.68■□□□□ 0.58
TNIP1-217ENST00000523200 C2CD5Q86YS7 1000 aa18.68■□□□□ 0.58
TNIP1-217ENST00000523200 MB21D2Q8IYB1 491 aaPredicted RBP18.68■□□□□ 0.58
TNIP1-217ENST00000523200 MPNDQ8N594 471 aa18.68■□□□□ 0.58
TNIP1-217ENST00000523200 ZNF622Q969S3 477 aaKnown RBP eCLIP18.68■□□□□ 0.583e-7■■■□□ 14.7
TNIP1-217ENST00000523200 CHMP4CQ96CF2 233 aa18.68■□□□□ 0.58
TNIP1-217ENST00000523200 LRRC2Q9BYS8 371 aa18.68■□□□□ 0.58
TNIP1-217ENST00000523200 LAMA4Q16363 1823 aa18.68■□□□□ 0.58
TNIP1-217ENST00000523200 BRD1O95696 1058 aa18.67■□□□□ 0.58
TNIP1-217ENST00000523200 ZNF384Q8TF68 577 aa18.67■□□□□ 0.58
TNIP1-217ENST00000523200 GJB2P29033 226 aa18.66■□□□□ 0.58
TNIP1-217ENST00000523200 GSTO1P78417 241 aa18.66■□□□□ 0.58
TNIP1-217ENST00000523200 ST3GAL1Q11201 340 aa18.66■□□□□ 0.58
TNIP1-217ENST00000523200 CCDC125Q86Z20 511 aa18.66■□□□□ 0.58
TNIP1-217ENST00000523200 NBPF3Q9H094 633 aa18.66■□□□□ 0.58
TNIP1-217ENST00000523200 CNNM2Q9H8M5 875 aa18.66■□□□□ 0.58
TNIP1-217ENST00000523200 JAG2Q9Y219 1238 aa18.66■□□□□ 0.58
TNIP1-217ENST00000523200 ZDHHC9Q9Y397 364 aa18.66■□□□□ 0.58
TNIP1-217ENST00000523200 WDR33Q9C0J8 1336 aaKnown RBP18.66■□□□□ 0.58
TNIP1-217ENST00000523200 PRC1O43663 620 aa18.66■□□□□ 0.58
TNIP1-217ENST00000523200 STK3Q13188 491 aa18.66■□□□□ 0.58
TNIP1-217ENST00000523200 GIMAP6Q6P9H5 292 aa18.66■□□□□ 0.58
TNIP1-217ENST00000523200 DPP8Q6V1X1 898 aaPredicted RBP18.66■□□□□ 0.58
TNIP1-217ENST00000523200 TBC1D10CQ8IV04 446 aa18.66■□□□□ 0.58
TNIP1-217ENST00000523200 GTF3C6Q969F1 213 aa18.66■□□□□ 0.58
TNIP1-217ENST00000523200 ZC3H12CQ9C0D7 883 aaKnown RBP18.66■□□□□ 0.58
TNIP1-217ENST00000523200 BAG4O95429 457 aaKnown RBP18.65■□□□□ 0.58
TNIP1-217ENST00000523200 CHST3Q7LGC8 479 aa18.65■□□□□ 0.58
TNIP1-217ENST00000523200 TBC1D22AQ8WUA7 517 aa18.65■□□□□ 0.58
TNIP1-217ENST00000523200 ZNF274Q96GC6 653 aaPredicted RBP18.65■□□□□ 0.58
TNIP1-217ENST00000523200 COA1Q9GZY4 146 aa18.65■□□□□ 0.58
TNIP1-217ENST00000523200 CCDC88AQ3V6T2 1871 aa18.64■□□□□ 0.57
TNIP1-217ENST00000523200 PFKFB2O60825 505 aa18.64■□□□□ 0.57
TNIP1-217ENST00000523200 LDHCP07864 332 aa18.64■□□□□ 0.57
TNIP1-217ENST00000523200 DYNLL1P63167 89 aaKnown RBP18.64■□□□□ 0.57
TNIP1-217ENST00000523200 APOBRQ0VD83 1088 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms