RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 LOC100289279A0A1B0GTE1 492 aa7.86□□□□□ -1.15
HMGB1P1-201ENST00000522557 TMEM238LA0A1B0GVL6 79 aa7.86□□□□□ -1.15
HMGB1P1-201ENST00000522557 FAM46AQ96IP4 442 aaKnown RBP7.86□□□□□ -1.15
HMGB1P1-201ENST00000522557 CEP41Q9BYV8 373 aa7.86□□□□□ -1.15
HMGB1P1-201ENST00000522557 RNF208Q9H0X6 261 aa7.86□□□□□ -1.15
HMGB1P1-201ENST00000522557 ZNF576Q9H609 170 aa7.86□□□□□ -1.15
HMGB1P1-201ENST00000522557 MEGF11A6BM72 1044 aa7.85□□□□□ -1.15
HMGB1P1-201ENST00000522557 MAPK8P45983 427 aa7.85□□□□□ -1.15
HMGB1P1-201ENST00000522557 ENOX2Q16206 610 aaKnown RBP7.85□□□□□ -1.15
HMGB1P1-201ENST00000522557 LDLRAD1Q5T700 205 aa7.85□□□□□ -1.15
HMGB1P1-201ENST00000522557 SETDB2Q96T68 719 aa7.85□□□□□ -1.15
HMGB1P1-201ENST00000522557 NRSN2Q9GZP1 204 aa7.85□□□□□ -1.15
HMGB1P1-201ENST00000522557 NLRP2Q9NX02 1062 aa7.85□□□□□ -1.15
HMGB1P1-201ENST00000522557 CTSBP07858 339 aa7.84□□□□□ -1.15
HMGB1P1-201ENST00000522557 PREPP48147 710 aa7.84□□□□□ -1.15
HMGB1P1-201ENST00000522557 ZNF157P51786 506 aaPredicted RBP7.84□□□□□ -1.15
HMGB1P1-201ENST00000522557 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.84□□□□□ -1.15
HMGB1P1-201ENST00000522557 ZMYM1Q5SVZ6 1142 aa7.84□□□□□ -1.15
HMGB1P1-201ENST00000522557 PRPF40BQ6NWY9 871 aaKnown RBP7.84□□□□□ -1.15
HMGB1P1-201ENST00000522557 TMPRSS13Q9BYE2 586 aa7.84□□□□□ -1.15
HMGB1P1-201ENST00000522557 BCO2Q9BYV7 579 aa7.84□□□□□ -1.15
HMGB1P1-201ENST00000522557 WWC3Q9ULE0 1092 aa7.84□□□□□ -1.15
HMGB1P1-201ENST00000522557 RAXQ9Y2V3 346 aa7.84□□□□□ -1.15
HMGB1P1-201ENST00000522557 SART1O43290 800 aaKnown RBP7.83□□□□□ -1.16
HMGB1P1-201ENST00000522557 B3GALT4O96024 378 aa7.83□□□□□ -1.16
HMGB1P1-201ENST00000522557 MAOBP27338 520 aa7.83□□□□□ -1.16
HMGB1P1-201ENST00000522557 EXOSC6Q5RKV6 272 aaKnown RBP7.83□□□□□ -1.16
HMGB1P1-201ENST00000522557 NUTM2GQ5VZR2 741 aa7.83□□□□□ -1.16
HMGB1P1-201ENST00000522557 ANKRD34AQ69YU3 496 aa7.83□□□□□ -1.16
HMGB1P1-201ENST00000522557 C12orf50Q8NA57 414 aaPredicted RBP7.83□□□□□ -1.16
HMGB1P1-201ENST00000522557 UTP4Q969X6 686 aaKnown RBP7.83□□□□□ -1.16
HMGB1P1-201ENST00000522557 TRIM56Q9BRZ2 755 aaKnown RBP7.83□□□□□ -1.16
HMGB1P1-201ENST00000522557 TRAK1Q9UPV9 953 aa7.83□□□□□ -1.16
HMGB1P1-201ENST00000522557 DHX15O43143 795 aaKnown RBP7.82□□□□□ -1.16
HMGB1P1-201ENST00000522557 ECEL1O95672 775 aa7.82□□□□□ -1.16
HMGB1P1-201ENST00000522557 DRD2P14416 443 aa7.82□□□□□ -1.16
HMGB1P1-201ENST00000522557 FCGRTP55899 365 aa7.82□□□□□ -1.16
HMGB1P1-201ENST00000522557 PTPN12Q05209 780 aaKnown RBP7.82□□□□□ -1.16
HMGB1P1-201ENST00000522557 FAAP100Q0VG06 881 aa7.82□□□□□ -1.16
HMGB1P1-201ENST00000522557 FDX2Q6P4F2 183 aa7.82□□□□□ -1.16
HMGB1P1-201ENST00000522557 NXPE4Q6UWF7 544 aa7.82□□□□□ -1.16
HMGB1P1-201ENST00000522557 MYRFLQ96LU7 910 aa7.82□□□□□ -1.16
HMGB1P1-201ENST00000522557 STOML1Q9UBI4 398 aa7.82□□□□□ -1.16
HMGB1P1-201ENST00000522557 BMP3P12645 472 aa7.81□□□□□ -1.16
HMGB1P1-201ENST00000522557 POU4F3Q15319 338 aa7.81□□□□□ -1.16
HMGB1P1-201ENST00000522557 EAPPQ56P03 285 aaPredicted RBP7.81□□□□□ -1.16
HMGB1P1-201ENST00000522557 ZNF326Q5BKZ1 582 aaKnown RBP7.81□□□□□ -1.16
HMGB1P1-201ENST00000522557 SMG8Q8ND04 991 aaKnown RBP7.81□□□□□ -1.16
HMGB1P1-201ENST00000522557 CYP11A1P05108 521 aa7.8□□□□□ -1.16
HMGB1P1-201ENST00000522557 FSTP19883 344 aa7.8□□□□□ -1.16
HMGB1P1-201ENST00000522557 UVSSAQ2YD98 709 aa7.8□□□□□ -1.16
HMGB1P1-201ENST00000522557 DTHD1Q6ZMT9 781 aa7.8□□□□□ -1.16
HMGB1P1-201ENST00000522557 FAM20CQ8IXL6 584 aa7.8□□□□□ -1.16
HMGB1P1-201ENST00000522557 CYP4F12Q9HCS2 524 aa7.8□□□□□ -1.16
HMGB1P1-201ENST00000522557 PPP4R2Q9NY27 417 aa7.8□□□□□ -1.16
HMGB1P1-201ENST00000522557 HMX2A2RU54 273 aa7.79□□□□□ -1.16
HMGB1P1-201ENST00000522557 TIAF1O95411 115 aa7.79□□□□□ -1.16
HMGB1P1-201ENST00000522557 RPS26P11Q5JNZ5 115 aaPredicted RBP7.79□□□□□ -1.16
HMGB1P1-201ENST00000522557 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.79□□□□□ -1.16
HMGB1P1-201ENST00000522557 TRIM42Q8IWZ5 723 aa7.79□□□□□ -1.16
HMGB1P1-201ENST00000522557 Q8N3U1 123 aa7.79□□□□□ -1.16
HMGB1P1-201ENST00000522557 SUGCTQ9HAC7 445 aa7.79□□□□□ -1.16
HMGB1P1-201ENST00000522557 EIF4EBP3O60516 100 aaPredicted RBP7.78□□□□□ -1.16
HMGB1P1-201ENST00000522557 PRPF40AO75400 957 aaKnown RBP7.78□□□□□ -1.16
HMGB1P1-201ENST00000522557 DDX54Q8TDD1 881 aaKnown RBP7.78□□□□□ -1.16
HMGB1P1-201ENST00000522557 CORO1BQ9BR76 489 aa7.78□□□□□ -1.16
HMGB1P1-201ENST00000522557 OSBPL7Q9BZF2 842 aa7.78□□□□□ -1.16
HMGB1P1-201ENST00000522557 KCNF1Q9H3M0 494 aa7.78□□□□□ -1.16
HMGB1P1-201ENST00000522557 C7orf69Q9H7B7 122 aa7.78□□□□□ -1.16
HMGB1P1-201ENST00000522557 AKAP2Q9Y2D5 859 aa7.78□□□□□ -1.16
HMGB1P1-201ENST00000522557 GAS2O43903 313 aaKnown RBP7.77□□□□□ -1.17
HMGB1P1-201ENST00000522557 TCF3P15923 654 aa7.77□□□□□ -1.17
HMGB1P1-201ENST00000522557 SOX4Q06945 474 aaPredicted RBP7.77□□□□□ -1.17
HMGB1P1-201ENST00000522557 SGO2Q562F6 1265 aa7.77□□□□□ -1.17
HMGB1P1-201ENST00000522557 BEND4Q6ZU67 534 aa7.77□□□□□ -1.17
HMGB1P1-201ENST00000522557 CLEC10AQ8IUN9 316 aa7.77□□□□□ -1.17
HMGB1P1-201ENST00000522557 FAM83CQ9BQN1 747 aa7.77□□□□□ -1.17
HMGB1P1-201ENST00000522557 ZC3H12CQ9C0D7 883 aaKnown RBP7.77□□□□□ -1.17
HMGB1P1-201ENST00000522557 RNF19AQ9NV58 838 aa7.77□□□□□ -1.17
HMGB1P1-201ENST00000522557 IGSF3O75054 1194 aa7.76□□□□□ -1.17
HMGB1P1-201ENST00000522557 IGLV1-40P01703 118 aa7.76□□□□□ -1.17
HMGB1P1-201ENST00000522557 ALG1LQ6GMV1 187 aa7.76□□□□□ -1.17
HMGB1P1-201ENST00000522557 CDPF1Q6NVV7 123 aa7.76□□□□□ -1.17
HMGB1P1-201ENST00000522557 TMC4Q7Z404 712 aa7.76□□□□□ -1.17
HMGB1P1-201ENST00000522557 C2CD4AQ8NCU7 369 aaPredicted RBP7.76□□□□□ -1.17
HMGB1P1-201ENST00000522557 FBF1Q8TES7 1133 aa7.76□□□□□ -1.17
HMGB1P1-201ENST00000522557 GPN3Q9UHW5 284 aaPredicted RBP7.76□□□□□ -1.17
HMGB1P1-201ENST00000522557 SCO2A0A1W2PP80 73 aa7.75□□□□□ -1.17
HMGB1P1-201ENST00000522557 LDHBP07195 334 aaKnown RBP7.75□□□□□ -1.17
HMGB1P1-201ENST00000522557 XRCC5P13010 732 aaKnown RBP7.75□□□□□ -1.17
HMGB1P1-201ENST00000522557 MAP4P27816 1152 aaKnown RBP7.75□□□□□ -1.17
HMGB1P1-201ENST00000522557 DAB2P98082 770 aa7.75□□□□□ -1.17
HMGB1P1-201ENST00000522557 AP3B2Q13367 1082 aa7.75□□□□□ -1.17
HMGB1P1-201ENST00000522557 AKAP4Q5JQC9 854 aa7.75□□□□□ -1.17
HMGB1P1-201ENST00000522557 RNF43Q68DV7 783 aa7.75□□□□□ -1.17
HMGB1P1-201ENST00000522557 C3orf58Q8NDZ4 430 aa7.75□□□□□ -1.17
HMGB1P1-201ENST00000522557 RAD18Q9NS91 495 aa7.75□□□□□ -1.17
HMGB1P1-201ENST00000522557 ADH5P11766 374 aa7.74□□□□□ -1.17
HMGB1P1-201ENST00000522557 LIG1P18858 919 aa7.74□□□□□ -1.17
HMGB1P1-201ENST00000522557 RXRBP28702 533 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms