RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 ZNF354CQ86Y25 554 aa18.4■□□□□ 0.54
PCDHA3-201ENST00000522353 PTPDC1A2A3K4 754 aa18.4■□□□□ 0.54
PCDHA3-201ENST00000522353 LRSAM1Q6UWE0 723 aa18.4■□□□□ 0.54
PCDHA3-201ENST00000522353 IQUBQ8NA54 791 aa18.4■□□□□ 0.54
PCDHA3-201ENST00000522353 ZBTB21Q9ULJ3 1066 aa18.4■□□□□ 0.54
PCDHA3-201ENST00000522353 CEP83Q9Y592 693 aa18.4■□□□□ 0.54
PCDHA3-201ENST00000522353 MROH5Q6ZUA9 1318 aa18.4■□□□□ 0.54
PCDHA3-201ENST00000522353 CHL1O00533 1208 aa18.4■□□□□ 0.54
PCDHA3-201ENST00000522353 MCM7P33993 719 aa18.4■□□□□ 0.54
PCDHA3-201ENST00000522353 HOMER2Q9NSB8 354 aa18.4■□□□□ 0.54
PCDHA3-201ENST00000522353 ECM2O94769 699 aaPredicted RBP18.39■□□□□ 0.54
PCDHA3-201ENST00000522353 LGR6Q9HBX8 967 aa18.39■□□□□ 0.54
PCDHA3-201ENST00000522353 RPL13P26373 211 aaKnown RBP18.39■□□□□ 0.53
PCDHA3-201ENST00000522353 FAM212AQ96EL1 285 aa18.39■□□□□ 0.53
PCDHA3-201ENST00000522353 IKBKGQ9Y6K9 419 aa18.39■□□□□ 0.53
PCDHA3-201ENST00000522353 H7C1D1 291 aa18.39■□□□□ 0.53
PCDHA3-201ENST00000522353 CHMLP26374 656 aa18.39■□□□□ 0.53
PCDHA3-201ENST00000522353 DLGAP5Q15398 846 aa18.38■□□□□ 0.53
PCDHA3-201ENST00000522353 GIGYF2Q6Y7W6 1299 aaKnown RBP18.38■□□□□ 0.53
PCDHA3-201ENST00000522353 ZNF496Q96IT1 587 aaPredicted RBP18.38■□□□□ 0.53
PCDHA3-201ENST00000522353 GPCPD1Q9NPB8 672 aa18.38■□□□□ 0.53
PCDHA3-201ENST00000522353 NPC1L1Q9UHC9 1359 aa18.38■□□□□ 0.53
PCDHA3-201ENST00000522353 RUFY3Q7L099 469 aa18.38■□□□□ 0.53
PCDHA3-201ENST00000522353 FMNL3Q8IVF7 1028 aa18.38■□□□□ 0.53
PCDHA3-201ENST00000522353 SMC5Q8IY18 1101 aa18.38■□□□□ 0.53
PCDHA3-201ENST00000522353 BBXQ8WY36 941 aaPredicted RBP18.38■□□□□ 0.53
PCDHA3-201ENST00000522353 G2E3Q7L622 706 aa18.38■□□□□ 0.53
PCDHA3-201ENST00000522353 TCIRG1Q13488 830 aa18.37■□□□□ 0.53
PCDHA3-201ENST00000522353 DBNDD2Q9BQY9 259 aa18.37■□□□□ 0.53
PCDHA3-201ENST00000522353 TNFAIP1Q13829 316 aa18.37■□□□□ 0.53
PCDHA3-201ENST00000522353 SNX21Q969T3 373 aa18.37■□□□□ 0.53
PCDHA3-201ENST00000522353 GIMAP6Q6P9H5 292 aa18.37■□□□□ 0.53
PCDHA3-201ENST00000522353 PPIP5K2O43314 1243 aa18.37■□□□□ 0.53
PCDHA3-201ENST00000522353 AK2P54819 239 aa18.37■□□□□ 0.53
PCDHA3-201ENST00000522353 CCDC65Q8IXS2 484 aa18.37■□□□□ 0.53
PCDHA3-201ENST00000522353 RTL1A6NKG5 1358 aa18.37■□□□□ 0.53
PCDHA3-201ENST00000522353 RPS8P62241 208 aaKnown RBP18.36■□□□□ 0.53
PCDHA3-201ENST00000522353 PLEKHM2Q8IWE5 1019 aa18.36■□□□□ 0.53
PCDHA3-201ENST00000522353 ARMT1Q9H993 441 aa18.36■□□□□ 0.53
PCDHA3-201ENST00000522353 DACT1Q9NYF0 836 aa18.36■□□□□ 0.53
PCDHA3-201ENST00000522353 CNPY2Q9Y2B0 182 aa18.36■□□□□ 0.53
PCDHA3-201ENST00000522353 ZBED4O75132 1171 aa18.36■□□□□ 0.53
PCDHA3-201ENST00000522353 GCKRQ14397 625 aa18.36■□□□□ 0.53
PCDHA3-201ENST00000522353 ATL3Q6DD88 541 aa18.36■□□□□ 0.53
PCDHA3-201ENST00000522353 USP48Q86UV5 1035 aa18.36■□□□□ 0.53
PCDHA3-201ENST00000522353 PPP1R2P41236 205 aa18.36■□□□□ 0.53
PCDHA3-201ENST00000522353 ZSCAN23Q3MJ62 389 aa18.36■□□□□ 0.53
PCDHA3-201ENST00000522353 FCHSD1Q86WN1 690 aa18.36■□□□□ 0.53
PCDHA3-201ENST00000522353 LMBR1Q8WVP7 490 aa18.36■□□□□ 0.53
PCDHA3-201ENST00000522353 ZKSCAN3Q9BRR0 538 aa18.36■□□□□ 0.53
PCDHA3-201ENST00000522353 DEXIO95424 95 aa18.36■□□□□ 0.53
PCDHA3-201ENST00000522353 SLC1A4P43007 532 aa18.36■□□□□ 0.53
PCDHA3-201ENST00000522353 PKNOX2Q96KN3 472 aa18.36■□□□□ 0.53
PCDHA3-201ENST00000522353 TRPC5Q9UL62 973 aaPredicted RBP18.36■□□□□ 0.53
PCDHA3-201ENST00000522353 LETM2Q2VYF4 491 aa18.36■□□□□ 0.53
PCDHA3-201ENST00000522353 HAUS3Q68CZ6 603 aa18.36■□□□□ 0.53
PCDHA3-201ENST00000522353 FAM200AQ8TCP9 573 aa18.36■□□□□ 0.53
PCDHA3-201ENST00000522353 DDX17Q92841 729 aaKnown RBP18.36■□□□□ 0.53
PCDHA3-201ENST00000522353 GNG11P61952 73 aa18.35■□□□□ 0.53
PCDHA3-201ENST00000522353 RILPL1Q5EBL4 403 aa18.35■□□□□ 0.53
PCDHA3-201ENST00000522353 CCDC117Q8IWD4 279 aaPredicted RBP18.35■□□□□ 0.53
PCDHA3-201ENST00000522353 SELENOOQ9BVL4 669 aa18.35■□□□□ 0.53
PCDHA3-201ENST00000522353 MAST1Q9Y2H9 1570 aa18.35■□□□□ 0.53
PCDHA3-201ENST00000522353 PLCD1P51178 756 aa18.35■□□□□ 0.53
PCDHA3-201ENST00000522353 SMTNP53814 917 aa18.35■□□□□ 0.53
PCDHA3-201ENST00000522353 DPY19L2Q6NUT2 758 aa18.35■□□□□ 0.53
PCDHA3-201ENST00000522353 B4E1Z4 1266 aa18.35■□□□□ 0.53
PCDHA3-201ENST00000522353 GRIPAP1Q4V328 841 aa18.35■□□□□ 0.53
PCDHA3-201ENST00000522353 CKAP4Q07065 602 aaKnown RBP18.35■□□□□ 0.53
PCDHA3-201ENST00000522353 PPP2R5BQ15173 497 aa18.35■□□□□ 0.53
PCDHA3-201ENST00000522353 GPR162Q16538 588 aa18.35■□□□□ 0.53
PCDHA3-201ENST00000522353 NOP56O00567 594 aaKnown RBP18.34■□□□□ 0.53
PCDHA3-201ENST00000522353 GPAA1O43292 621 aa18.34■□□□□ 0.53
PCDHA3-201ENST00000522353 RXRAP19793 462 aa18.34■□□□□ 0.53
PCDHA3-201ENST00000522353 DNM1Q05193 864 aaKnown RBP18.34■□□□□ 0.53
PCDHA3-201ENST00000522353 TTC16Q8NEE8 873 aa18.34■□□□□ 0.53
PCDHA3-201ENST00000522353 BCCIPQ9P287 314 aaKnown RBP eCLIP18.34■□□□□ 0.53
PCDHA3-201ENST00000522353 TAF5LO75529 589 aa18.34■□□□□ 0.53
PCDHA3-201ENST00000522353 MICALCLQ6ZW33 695 aa18.34■□□□□ 0.53
PCDHA3-201ENST00000522353 SV2BQ7L1I2 683 aa18.34■□□□□ 0.53
PCDHA3-201ENST00000522353 PAXBP1Q9Y5B6 917 aa18.34■□□□□ 0.53
PCDHA3-201ENST00000522353 STK24Q9Y6E0 443 aa18.34■□□□□ 0.53
PCDHA3-201ENST00000522353 RLBP1P12271 317 aa18.34■□□□□ 0.53
PCDHA3-201ENST00000522353 INTS4Q96HW7 963 aaKnown RBP18.34■□□□□ 0.53
PCDHA3-201ENST00000522353 ZNF594Q96JF6 807 aaPredicted RBP18.34■□□□□ 0.53
PCDHA3-201ENST00000522353 AATFQ9NY61 560 aaKnown RBP eCLIP18.34■□□□□ 0.53
PCDHA3-201ENST00000522353 IBTKQ9P2D0 1353 aaPredicted RBP18.33■□□□□ 0.53
PCDHA3-201ENST00000522353 ERICH4A6NGS2 130 aa18.33■□□□□ 0.53
PCDHA3-201ENST00000522353 ZFYVE16Q7Z3T8 1539 aa18.33■□□□□ 0.53
PCDHA3-201ENST00000522353 ANGEL1Q9UNK9 670 aaKnown RBP18.33■□□□□ 0.53
PCDHA3-201ENST00000522353 BCS1LQ9Y276 419 aa18.33■□□□□ 0.53
PCDHA3-201ENST00000522353 ZBTB7BO15156 539 aaPredicted RBP18.33■□□□□ 0.52
PCDHA3-201ENST00000522353 IRX3P78415 501 aaPredicted RBP18.33■□□□□ 0.52
PCDHA3-201ENST00000522353 DPH6Q7L8W6 267 aa18.33■□□□□ 0.52
PCDHA3-201ENST00000522353 NEK11Q8NG66 645 aa18.33■□□□□ 0.52
PCDHA3-201ENST00000522353 LZTS2Q9BRK4 669 aa18.33■□□□□ 0.52
PCDHA3-201ENST00000522353 AOX1Q06278 1338 aa18.33■□□□□ 0.52
PCDHA3-201ENST00000522353 UBE4AQ14139 1066 aa18.33■□□□□ 0.52
PCDHA3-201ENST00000522353 ANO6Q4KMQ2 910 aa18.33■□□□□ 0.52
PCDHA3-201ENST00000522353 KBTBD3Q8NAB2 608 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms