RNA–Protein interactions for RNA: ENST00000522230.1

CKS1BP7-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 7, humanhuman

BASIC

Gene CKS1BP7, Length 235 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP7-201ENST00000522230 BTBD6Q96KE9 485 aa4.12□□□□□ -1.75
CKS1BP7-201ENST00000522230 C8orf37Q96NL8 207 aa4.12□□□□□ -1.75
CKS1BP7-201ENST00000522230 ZC3H12CQ9C0D7 883 aaKnown RBP4.12□□□□□ -1.75
CKS1BP7-201ENST00000522230 FRRS1LQ9P0K9 344 aa4.12□□□□□ -1.75
CKS1BP7-201ENST00000522230 PPM1HQ9ULR3 514 aa4.12□□□□□ -1.75
CKS1BP7-201ENST00000522230 TLR3O15455 904 aaKnown RBP4.11□□□□□ -1.75
CKS1BP7-201ENST00000522230 OIP5O43482 229 aa4.11□□□□□ -1.75
CKS1BP7-201ENST00000522230 WFS1O76024 890 aa4.11□□□□□ -1.75
CKS1BP7-201ENST00000522230 B3GALT4O96024 378 aa4.11□□□□□ -1.75
CKS1BP7-201ENST00000522230 CTSBP07858 339 aa4.11□□□□□ -1.75
CKS1BP7-201ENST00000522230 SLURP2P0DP57 97 aa4.11□□□□□ -1.75
CKS1BP7-201ENST00000522230 BCRP11274 1271 aa4.11□□□□□ -1.75
CKS1BP7-201ENST00000522230 SEPT6Q14141 434 aa4.11□□□□□ -1.75
CKS1BP7-201ENST00000522230 IKBKEQ14164 716 aa4.11□□□□□ -1.75
CKS1BP7-201ENST00000522230 LCE2AQ5TA79 106 aaPredicted RBP4.11□□□□□ -1.75
CKS1BP7-201ENST00000522230 SV2BQ7L1I2 683 aa4.11□□□□□ -1.75
CKS1BP7-201ENST00000522230 RELL1Q8IUW5 271 aa4.11□□□□□ -1.75
CKS1BP7-201ENST00000522230 DMRTC2Q8IXT2 367 aaPredicted RBP4.11□□□□□ -1.75
CKS1BP7-201ENST00000522230 FBXO27Q8NI29 283 aa4.11□□□□□ -1.75
CKS1BP7-201ENST00000522230 RHOVQ96L33 236 aa4.11□□□□□ -1.75
CKS1BP7-201ENST00000522230 TMEM74Q96NL1 305 aa4.11□□□□□ -1.75
CKS1BP7-201ENST00000522230 RSRP1Q9BUV0 290 aa4.11□□□□□ -1.75
CKS1BP7-201ENST00000522230 NOC4LQ9BVI4 516 aaKnown RBP4.11□□□□□ -1.75
CKS1BP7-201ENST00000522230 CBX8Q9HC52 389 aa4.11□□□□□ -1.75
CKS1BP7-201ENST00000522230 TMEM39AQ9NV64 488 aa4.11□□□□□ -1.75
CKS1BP7-201ENST00000522230 INPP5FQ9Y2H2 1132 aa4.11□□□□□ -1.75
CKS1BP7-201ENST00000522230 H3BRJ5 948 aa4.1□□□□□ -1.75
CKS1BP7-201ENST00000522230 DDX3YO15523 660 aaKnown RBP4.1□□□□□ -1.75
CKS1BP7-201ENST00000522230 LILRB5O75023 590 aa4.1□□□□□ -1.75
CKS1BP7-201ENST00000522230 BMP6P22004 513 aa4.1□□□□□ -1.75
CKS1BP7-201ENST00000522230 GARTP22102 1010 aa4.1□□□□□ -1.75
CKS1BP7-201ENST00000522230 DNAJA1P31689 397 aaKnown RBP4.1□□□□□ -1.75
CKS1BP7-201ENST00000522230 CDK8P49336 464 aa4.1□□□□□ -1.75
CKS1BP7-201ENST00000522230 GSTM4Q03013 218 aa4.1□□□□□ -1.75
CKS1BP7-201ENST00000522230 PTPN11Q06124 597 aaPredicted RBP4.1□□□□□ -1.75
CKS1BP7-201ENST00000522230 COL9A3Q14050 684 aaPredicted RBP4.1□□□□□ -1.75
CKS1BP7-201ENST00000522230 RPS26P11Q5JNZ5 115 aaPredicted RBP4.1□□□□□ -1.75
CKS1BP7-201ENST00000522230 FBXL19Q6PCT2 694 aa4.1□□□□□ -1.75
CKS1BP7-201ENST00000522230 BNC2Q6ZN30 1099 aaPredicted RBP4.1□□□□□ -1.75
CKS1BP7-201ENST00000522230 WFDC8Q8IUA0 241 aa4.1□□□□□ -1.75
CKS1BP7-201ENST00000522230 SULF2Q8IWU5 870 aa4.1□□□□□ -1.75
CKS1BP7-201ENST00000522230 JARID2Q92833 1246 aaPredicted RBP4.1□□□□□ -1.75
CKS1BP7-201ENST00000522230 EAF1Q96JC9 268 aaPredicted RBP4.1□□□□□ -1.75
CKS1BP7-201ENST00000522230 SPON2Q9BUD6 331 aa4.1□□□□□ -1.75
CKS1BP7-201ENST00000522230 CEP44Q9C0F1 390 aa4.1□□□□□ -1.75
CKS1BP7-201ENST00000522230 PPME1Q9Y570 386 aa4.1□□□□□ -1.75
CKS1BP7-201ENST00000522230 CUX1P39880 1505 aa4.1□□□□□ -1.75
CKS1BP7-201ENST00000522230 NID1P14543 1247 aa4.09□□□□□ -1.75
CKS1BP7-201ENST00000522230 HOXB4P17483 251 aaPredicted RBP4.09□□□□□ -1.75
CKS1BP7-201ENST00000522230 EIF4A3P38919 411 aaKnown RBP4.09□□□□□ -1.75
CKS1BP7-201ENST00000522230 CRKP46108 304 aa4.09□□□□□ -1.75
CKS1BP7-201ENST00000522230 CABP4P57796 275 aa4.09□□□□□ -1.75
CKS1BP7-201ENST00000522230 NLRP12P59046 1061 aa4.09□□□□□ -1.75
CKS1BP7-201ENST00000522230 CAMK2GQ13555 558 aaPredicted RBP4.09□□□□□ -1.75
CKS1BP7-201ENST00000522230 SNAP47Q5SQN1 464 aa4.09□□□□□ -1.75
CKS1BP7-201ENST00000522230 ZNF385CQ66K41 422 aaPredicted RBP4.09□□□□□ -1.75
CKS1BP7-201ENST00000522230 MSL1Q68DK7 614 aa4.09□□□□□ -1.75
CKS1BP7-201ENST00000522230 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.09□□□□□ -1.75
CKS1BP7-201ENST00000522230 AGMOQ6ZNB7 445 aa4.09□□□□□ -1.75
CKS1BP7-201ENST00000522230 KIAA0825Q8IV33 1275 aa4.09□□□□□ -1.75
CKS1BP7-201ENST00000522230 GOLM1Q8NBJ4 401 aa4.09□□□□□ -1.75
CKS1BP7-201ENST00000522230 GALNT11Q8NCW6 608 aa4.09□□□□□ -1.75
CKS1BP7-201ENST00000522230 ANKRD24Q8TF21 1146 aa4.09□□□□□ -1.75
CKS1BP7-201ENST00000522230 ZNF296Q8WUU4 475 aaPredicted RBP4.09□□□□□ -1.75
CKS1BP7-201ENST00000522230 SREK1Q8WXA9 508 aaKnown RBP4.09□□□□□ -1.75
CKS1BP7-201ENST00000522230 DHX38Q92620 1227 aaKnown RBP4.09□□□□□ -1.75
CKS1BP7-201ENST00000522230 TTC9Q92623 222 aa4.09□□□□□ -1.75
CKS1BP7-201ENST00000522230 KLHDC7BQ96G42 594 aa4.09□□□□□ -1.75
CKS1BP7-201ENST00000522230 PCGF6Q9BYE7 350 aa4.09□□□□□ -1.75
CKS1BP7-201ENST00000522230 RRAGCQ9HB90 399 aa4.09□□□□□ -1.75
CKS1BP7-201ENST00000522230 KCNK4Q9NYG8 393 aa4.09□□□□□ -1.75
CKS1BP7-201ENST00000522230 UBP1Q9NZI7 540 aa4.09□□□□□ -1.75
CKS1BP7-201ENST00000522230 CADPSQ9ULU8 1353 aa4.09□□□□□ -1.75
CKS1BP7-201ENST00000522230 FAM177BA6PVY3 158 aa4.08□□□□□ -1.76
CKS1BP7-201ENST00000522230 FAM229AH3BQW9 127 aa4.08□□□□□ -1.76
CKS1BP7-201ENST00000522230 TM4SF5O14894 197 aa4.08□□□□□ -1.76
CKS1BP7-201ENST00000522230 FSCN2O14926 492 aa4.08□□□□□ -1.76
CKS1BP7-201ENST00000522230 ADAM11O75078 769 aa4.08□□□□□ -1.76
CKS1BP7-201ENST00000522230 DEAF1O75398 565 aaPredicted RBP4.08□□□□□ -1.76
CKS1BP7-201ENST00000522230 F13A1P00488 732 aa4.08□□□□□ -1.76
CKS1BP7-201ENST00000522230 CFTRP13569 1480 aa4.08□□□□□ -1.76
CKS1BP7-201ENST00000522230 NME2P22392 152 aa4.08□□□□□ -1.76
CKS1BP7-201ENST00000522230 SNRPNP63162 240 aaKnown RBP4.08□□□□□ -1.76
CKS1BP7-201ENST00000522230 PPP2R3AQ06190 1150 aa4.08□□□□□ -1.76
CKS1BP7-201ENST00000522230 MAP1SQ66K74 1059 aaPredicted RBP4.08□□□□□ -1.76
CKS1BP7-201ENST00000522230 KANK3Q6NY19 840 aa4.08□□□□□ -1.76
CKS1BP7-201ENST00000522230 PDZD3Q86UT5 571 aa4.08□□□□□ -1.76
CKS1BP7-201ENST00000522230 SVOPQ8N4V2 548 aa4.08□□□□□ -1.76
CKS1BP7-201ENST00000522230 UBASH3BQ8TF42 649 aa4.08□□□□□ -1.76
CKS1BP7-201ENST00000522230 KCNB2Q92953 911 aa4.08□□□□□ -1.76
CKS1BP7-201ENST00000522230 GAL3ST3Q96A11 431 aa4.08□□□□□ -1.76
CKS1BP7-201ENST00000522230 GPRASP2Q96D09 838 aa4.08□□□□□ -1.76
CKS1BP7-201ENST00000522230 FANCD2Q9BXW9 1451 aa4.08□□□□□ -1.76
CKS1BP7-201ENST00000522230 TANGO6Q9C0B7 1094 aa4.08□□□□□ -1.76
CKS1BP7-201ENST00000522230 ZFYVE1Q9HBF4 777 aa4.08□□□□□ -1.76
CKS1BP7-201ENST00000522230 PRKAG2Q9UGJ0 569 aa4.08□□□□□ -1.76
CKS1BP7-201ENST00000522230 RAD54L2Q9Y4B4 1467 aa4.07□□□□□ -1.76
CKS1BP7-201ENST00000522230 DLGAP3O95886 979 aa4.07□□□□□ -1.76
CKS1BP7-201ENST00000522230 SELPP16109 830 aa4.07□□□□□ -1.76
CKS1BP7-201ENST00000522230 MAOBP27338 520 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms