RNA–Protein interactions for RNA: ENST00000520539.5

UBR5-207, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBR5, Length 10,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-207ENST00000520539 CDR2Q01850 454 aa17.29■□□□□ 0.36
UBR5-207ENST00000520539 FAM160A1Q05DH4 1040 aa17.28■□□□□ 0.36
UBR5-207ENST00000520539 IMPACTQ9P2X3 320 aa17.28■□□□□ 0.36
UBR5-207ENST00000520539 GOLGA8KD6RF30 607 aa17.28■□□□□ 0.36
UBR5-207ENST00000520539 TTC4O95801 387 aa17.28■□□□□ 0.36
UBR5-207ENST00000520539 KRT8P05787 483 aa17.28■□□□□ 0.36
UBR5-207ENST00000520539 EVI5LQ96CN4 794 aa17.28■□□□□ 0.36
UBR5-207ENST00000520539 SMIM23A6NLE4 172 aa17.28■□□□□ 0.36
UBR5-207ENST00000520539 TMX1Q9H3N1 280 aa17.28■□□□□ 0.36
UBR5-207ENST00000520539 APBA1Q02410 837 aa17.28■□□□□ 0.36
UBR5-207ENST00000520539 UBXN1Q04323 297 aa17.28■□□□□ 0.36
UBR5-207ENST00000520539 PSME1Q06323 249 aa17.28■□□□□ 0.36
UBR5-207ENST00000520539 MRPS27Q92552 414 aaKnown RBP17.28■□□□□ 0.36
UBR5-207ENST00000520539 ZNF830Q96NB3 372 aaPredicted RBP17.28■□□□□ 0.36
UBR5-207ENST00000520539 GDAP1L1Q96MZ0 367 aa17.27■□□□□ 0.36
UBR5-207ENST00000520539 SKOR1P84550 965 aa17.27■□□□□ 0.36
UBR5-207ENST00000520539 ST13P4Q8IZP2 240 aaPredicted RBP17.27■□□□□ 0.36
UBR5-207ENST00000520539 SIL1Q9H173 461 aa17.27■□□□□ 0.36
UBR5-207ENST00000520539 FAM8A1Q9UBU6 413 aa17.27■□□□□ 0.36
UBR5-207ENST00000520539 CCDC122Q5T0U0 273 aa17.27■□□□□ 0.36
UBR5-207ENST00000520539 CYP26C1Q6V0L0 522 aa17.27■□□□□ 0.36
UBR5-207ENST00000520539 PLEKHO1Q53GL0 409 aaPredicted RBP17.27■□□□□ 0.35
UBR5-207ENST00000520539 NUTM2DQ5VT03 806 aaPredicted RBP17.27■□□□□ 0.35
UBR5-207ENST00000520539 MCM10Q7L590 875 aa17.27■□□□□ 0.35
UBR5-207ENST00000520539 NUTM2AQ8IVF1 878 aaPredicted RBP17.27■□□□□ 0.35
UBR5-207ENST00000520539 MYOM3Q5VTT5 1437 aa17.27■□□□□ 0.35
UBR5-207ENST00000520539 SERPINB10P48595 397 aa17.26■□□□□ 0.35
UBR5-207ENST00000520539 HOXA7P31268 230 aaPredicted RBP17.26■□□□□ 0.35
UBR5-207ENST00000520539 CFAP221Q4G0U5 840 aa17.26■□□□□ 0.35
UBR5-207ENST00000520539 FERMT3Q86UX7 667 aa17.26■□□□□ 0.35
UBR5-207ENST00000520539 TSC22D3Q99576 134 aa17.26■□□□□ 0.35
UBR5-207ENST00000520539 CEP126Q9P2H0 1117 aa17.26■□□□□ 0.35
UBR5-207ENST00000520539 GPRASP1Q5JY77 1395 aa17.26■□□□□ 0.35
UBR5-207ENST00000520539 CCHCR1Q8TD31 782 aa17.26■□□□□ 0.35
UBR5-207ENST00000520539 ZNF354CQ86Y25 554 aa17.26■□□□□ 0.35
UBR5-207ENST00000520539 MYH9P35579 1960 aaKnown RBP17.26■□□□□ 0.35
UBR5-207ENST00000520539 PPP1R12AO14974 1030 aaPredicted RBP17.26■□□□□ 0.35
UBR5-207ENST00000520539 MLECQ14165 292 aa17.26■□□□□ 0.35
UBR5-207ENST00000520539 ABCC11Q96J66 1382 aa17.26■□□□□ 0.35
UBR5-207ENST00000520539 CCDC125Q86Z20 511 aa17.26■□□□□ 0.35
UBR5-207ENST00000520539 HDGFL1Q5TGJ6 251 aa17.26■□□□□ 0.35
UBR5-207ENST00000520539 BAG1Q99933 345 aaPredicted RBP17.26■□□□□ 0.35
UBR5-207ENST00000520539 TRAK1Q9UPV9 953 aa17.26■□□□□ 0.35
UBR5-207ENST00000520539 SLC8A3P57103 927 aa17.25■□□□□ 0.35
UBR5-207ENST00000520539 RPL13P26373 211 aaKnown RBP17.25■□□□□ 0.35
UBR5-207ENST00000520539 ANGPTL2Q9UKU9 493 aa17.25■□□□□ 0.35
UBR5-207ENST00000520539 ABTB1Q969K4 478 aaPredicted RBP17.25■□□□□ 0.35
UBR5-207ENST00000520539 KIFC2Q96AC6 838 aa17.25■□□□□ 0.35
UBR5-207ENST00000520539 PDE4BQ07343 736 aa17.25■□□□□ 0.35
UBR5-207ENST00000520539 TSC1Q92574 1164 aa17.25■□□□□ 0.35
UBR5-207ENST00000520539 FAM204AQ9H8W3 233 aa17.25■□□□□ 0.35
UBR5-207ENST00000520539 IGHMBP2P38935 993 aaKnown RBP17.25■□□□□ 0.35
UBR5-207ENST00000520539 NCBP1Q09161 790 aaKnown RBP17.25■□□□□ 0.35
UBR5-207ENST00000520539 NBPF9Q3BBW0 867 aa17.25■□□□□ 0.35
UBR5-207ENST00000520539 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.25■□□□□ 0.35
UBR5-207ENST00000520539 SERPINB6P35237 376 aa17.25■□□□□ 0.35
UBR5-207ENST00000520539 PPANQ9NQ55 473 aaKnown RBP17.25■□□□□ 0.35
UBR5-207ENST00000520539 MAP3K12Q12852 859 aa17.25■□□□□ 0.35
UBR5-207ENST00000520539 VGLL3A8MV65 326 aa17.24■□□□□ 0.35
UBR5-207ENST00000520539 MIS12Q9H081 205 aa17.24■□□□□ 0.35
UBR5-207ENST00000520539 TUBB6Q9BUF5 446 aa17.24■□□□□ 0.35
UBR5-207ENST00000520539 HNRNPCL2B2RXH8 293 aa17.24■□□□□ 0.35
UBR5-207ENST00000520539 HNRNPCL1O60812 293 aaKnown RBP17.24■□□□□ 0.35
UBR5-207ENST00000520539 LIN9Q5TKA1 542 aa17.24■□□□□ 0.35
UBR5-207ENST00000520539 TRIM42Q8IWZ5 723 aa17.24■□□□□ 0.35
UBR5-207ENST00000520539 MAIP1Q8WWC4 291 aa17.24■□□□□ 0.35
UBR5-207ENST00000520539 MRFAP1Q9Y605 127 aa17.24■□□□□ 0.35
UBR5-207ENST00000520539 TLDC2A0PJX2 215 aa17.24■□□□□ 0.35
UBR5-207ENST00000520539 CEP19Q96LK0 163 aa17.24■□□□□ 0.35
UBR5-207ENST00000520539 AKR1B15C9JRZ8 316 aaPredicted RBP17.24■□□□□ 0.35
UBR5-207ENST00000520539 UTP14CQ5TAP6 766 aaKnown RBP17.24■□□□□ 0.35
UBR5-207ENST00000520539 SH2D4AQ9H788 454 aa17.24■□□□□ 0.35
UBR5-207ENST00000520539 RRAGBQ5VZM2 374 aa17.24■□□□□ 0.35
UBR5-207ENST00000520539 CFAP65Q6ZU64 1925 aaKnown RBP17.24■□□□□ 0.35
UBR5-207ENST00000520539 RPS6KA2Q15349 733 aa17.24■□□□□ 0.35
UBR5-207ENST00000520539 MCF2L2Q86YR7 1114 aa17.24■□□□□ 0.35
UBR5-207ENST00000520539 RILPQ96NA2 401 aa17.23■□□□□ 0.35
UBR5-207ENST00000520539 BIN1O00499 593 aa17.23■□□□□ 0.35
UBR5-207ENST00000520539 EFCAB14O75071 495 aa17.23■□□□□ 0.35
UBR5-207ENST00000520539 ZSCAN22P10073 491 aaPredicted RBP17.23■□□□□ 0.35
UBR5-207ENST00000520539 ZNF569Q5MCW4 686 aa17.23■□□□□ 0.35
UBR5-207ENST00000520539 LRGUKQ96M69 825 aa17.23■□□□□ 0.35
UBR5-207ENST00000520539 RBSNQ9H1K0 784 aa17.23■□□□□ 0.35
UBR5-207ENST00000520539 RGS16O15492 202 aaPredicted RBP17.23■□□□□ 0.35
UBR5-207ENST00000520539 BMP2KLQ5H9B9 411 aa17.23■□□□□ 0.35
UBR5-207ENST00000520539 GJB2P29033 226 aa17.23■□□□□ 0.35
UBR5-207ENST00000520539 STX2P32856 288 aa17.23■□□□□ 0.35
UBR5-207ENST00000520539 KIF11P52732 1056 aa17.23■□□□□ 0.35
UBR5-207ENST00000520539 RBM5P52756 815 aaKnown RBP eCLIP17.23■□□□□ 0.35
UBR5-207ENST00000520539 NUDCD3Q8IVD9 361 aa17.23■□□□□ 0.35
UBR5-207ENST00000520539 PLCB4Q15147 1175 aa17.23■□□□□ 0.35
UBR5-207ENST00000520539 PPP2R5AQ15172 486 aa17.23■□□□□ 0.35
UBR5-207ENST00000520539 AGTPBP1Q9UPW5 1226 aa17.23■□□□□ 0.35
UBR5-207ENST00000520539 ZRANB2O95218 330 aaKnown RBP eCLIP17.22■□□□□ 0.359e-7■□□□□ 9.3
UBR5-207ENST00000520539 UAP1Q16222 522 aaPredicted RBP17.22■□□□□ 0.35
UBR5-207ENST00000520539 TMTC2Q8N394 836 aa17.22■□□□□ 0.35
UBR5-207ENST00000520539 SUN1O94901 812 aa17.22■□□□□ 0.35
UBR5-207ENST00000520539 FRMD4BQ9Y2L6 1034 aa17.22■□□□□ 0.35
UBR5-207ENST00000520539 CCDC141Q6ZP82 1450 aa17.22■□□□□ 0.35
UBR5-207ENST00000520539 RSBN1LQ6PCB5 846 aaPredicted RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms