RNA–Protein interactions for RNA: ENST00000520513.1

LINC00535-204, long intergenic non-protein coding RNA 535, humanhuman

TSL 3 BASIC

Gene LINC00535, Length 305 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-204ENST00000520513 SMG8Q8ND04 991 aaKnown RBP8.9□□□□□ -0.98
LINC00535-204ENST00000520513 CCDC74AQ96AQ1 378 aa8.9□□□□□ -0.98
LINC00535-204ENST00000520513 PSMG3-AS1Q96PY0 264 aa8.9□□□□□ -0.98
LINC00535-204ENST00000520513 CITED4Q96RK1 184 aa8.9□□□□□ -0.98
LINC00535-204ENST00000520513 FAM83CQ9BQN1 747 aa8.9□□□□□ -0.98
LINC00535-204ENST00000520513 ZNF576Q9H609 170 aa8.9□□□□□ -0.98
LINC00535-204ENST00000520513 SUGCTQ9HAC7 445 aa8.9□□□□□ -0.98
LINC00535-204ENST00000520513 ABCB6Q9NP58 842 aa8.9□□□□□ -0.98
LINC00535-204ENST00000520513 CD97P48960 835 aa8.89□□□□□ -0.99
LINC00535-204ENST00000520513 PDE3BQ13370 1112 aa8.89□□□□□ -0.99
LINC00535-204ENST00000520513 CLEC10AQ8IUN9 316 aa8.89□□□□□ -0.99
LINC00535-204ENST00000520513 GLIS3Q8NEA6 775 aa8.89□□□□□ -0.99
LINC00535-204ENST00000520513 EPS8L3Q8TE67 593 aaKnown RBP8.89□□□□□ -0.99
LINC00535-204ENST00000520513 RBCK1Q9BYM8 510 aa8.89□□□□□ -0.99
LINC00535-204ENST00000520513 EIF4EBP3O60516 100 aaPredicted RBP8.88□□□□□ -0.99
LINC00535-204ENST00000520513 ITPKAP23677 461 aa8.88□□□□□ -0.99
LINC00535-204ENST00000520513 NUTM2GQ5VZR2 741 aa8.88□□□□□ -0.99
LINC00535-204ENST00000520513 PI16Q6UXB8 463 aa8.88□□□□□ -0.99
LINC00535-204ENST00000520513 TMC7Q7Z402 723 aa8.88□□□□□ -0.99
LINC00535-204ENST00000520513 C12orf50Q8NA57 414 aaPredicted RBP8.88□□□□□ -0.99
LINC00535-204ENST00000520513 EHD4Q9H223 541 aa8.88□□□□□ -0.99
LINC00535-204ENST00000520513 KCNF1Q9H3M0 494 aa8.88□□□□□ -0.99
LINC00535-204ENST00000520513 PCMTD2Q9NV79 361 aa8.88□□□□□ -0.99
LINC00535-204ENST00000520513 ADAMTS4O75173 837 aa8.87□□□□□ -0.99
LINC00535-204ENST00000520513 MAOBP27338 520 aa8.87□□□□□ -0.99
LINC00535-204ENST00000520513 EXOSC6Q5RKV6 272 aaKnown RBP8.87□□□□□ -0.99
LINC00535-204ENST00000520513 CDPF1Q6NVV7 123 aa8.87□□□□□ -0.99
LINC00535-204ENST00000520513 C2CD4AQ8NCU7 369 aaPredicted RBP8.87□□□□□ -0.99
LINC00535-204ENST00000520513 ALKBH8Q96BT7 664 aaKnown RBP8.87□□□□□ -0.99
LINC00535-204ENST00000520513 CSRNP1Q96S65 589 aa8.87□□□□□ -0.99
LINC00535-204ENST00000520513 DBNDD2Q9BQY9 259 aa8.87□□□□□ -0.99
LINC00535-204ENST00000520513 B3GALT4O96024 378 aa8.86□□□□□ -0.99
LINC00535-204ENST00000520513 MAP4P27816 1152 aaKnown RBP8.86□□□□□ -0.99
LINC00535-204ENST00000520513 FAAP100Q0VG06 881 aa8.86□□□□□ -0.99
LINC00535-204ENST00000520513 GRM2Q14416 872 aa8.86□□□□□ -0.99
LINC00535-204ENST00000520513 RGS22Q8NE09 1264 aa8.86□□□□□ -0.99
LINC00535-204ENST00000520513 SHKBP1Q8TBC3 707 aa8.86□□□□□ -0.99
LINC00535-204ENST00000520513 TMC1Q8TDI8 760 aa8.86□□□□□ -0.99
LINC00535-204ENST00000520513 DNAJC25Q9H1X3 360 aa8.86□□□□□ -0.99
LINC00535-204ENST00000520513 KIAA1324LA8MWY0 1029 aaPredicted RBP8.85□□□□□ -0.99
LINC00535-204ENST00000520513 COBLO75128 1261 aa8.85□□□□□ -0.99
LINC00535-204ENST00000520513 PRPF40BQ6NWY9 871 aaKnown RBP8.85□□□□□ -0.99
LINC00535-204ENST00000520513 GAS2O43903 313 aaKnown RBP8.84□□□□□ -0.99
LINC00535-204ENST00000520513 NEFLP07196 543 aa8.84□□□□□ -0.99
LINC00535-204ENST00000520513 ERCC3P19447 782 aa8.84□□□□□ -0.99
LINC00535-204ENST00000520513 SOX4Q06945 474 aaPredicted RBP8.84□□□□□ -0.99
LINC00535-204ENST00000520513 DSC3Q14574 896 aa8.84□□□□□ -0.99
LINC00535-204ENST00000520513 FBLIM1Q8WUP2 373 aa8.84□□□□□ -0.99
LINC00535-204ENST00000520513 MFSD14AQ96MC6 490 aa8.84□□□□□ -0.99
LINC00535-204ENST00000520513 CYP4F12Q9HCS2 524 aa8.84□□□□□ -0.99
LINC00535-204ENST00000520513 TMEM238LA0A1B0GVL6 79 aa8.83□□□□□ -1
LINC00535-204ENST00000520513 ADH5P11766 374 aa8.83□□□□□ -1
LINC00535-204ENST00000520513 ZNF157P51786 506 aaPredicted RBP8.83□□□□□ -1
LINC00535-204ENST00000520513 POU4F3Q15319 338 aa8.83□□□□□ -1
LINC00535-204ENST00000520513 DMRTB1Q96MA1 342 aa8.83□□□□□ -1
LINC00535-204ENST00000520513 F13BP05160 661 aa8.82□□□□□ -1
LINC00535-204ENST00000520513 HOXA10P31260 410 aaPredicted RBP8.82□□□□□ -1
LINC00535-204ENST00000520513 GRIK1P39086 918 aa8.82□□□□□ -1
LINC00535-204ENST00000520513 INTS5Q6P9B9 1019 aaKnown RBP8.82□□□□□ -1
LINC00535-204ENST00000520513 BIN2Q9UBW5 565 aaPredicted RBP8.82□□□□□ -1
LINC00535-204ENST00000520513 ACTL7BQ9Y614 415 aa8.82□□□□□ -1
LINC00535-204ENST00000520513 WDR64B1ANS9 1081 aa8.81□□□□□ -1
LINC00535-204ENST00000520513 GADD45BO75293 160 aaPredicted RBP8.81□□□□□ -1
LINC00535-204ENST00000520513 SPINK2P20155 84 aa8.81□□□□□ -1
LINC00535-204ENST00000520513 ADMP35318 185 aa8.81□□□□□ -1
LINC00535-204ENST00000520513 DCTN4Q9UJW0 460 aa8.81□□□□□ -1
LINC00535-204ENST00000520513 CYP11A1P05108 521 aa8.8□□□□□ -1
LINC00535-204ENST00000520513 RXRBP28702 533 aa8.8□□□□□ -1
LINC00535-204ENST00000520513 PTPN12Q05209 780 aaKnown RBP8.8□□□□□ -1
LINC00535-204ENST00000520513 GATA6Q92908 595 aa8.8□□□□□ -1
LINC00535-204ENST00000520513 WDR89Q96FK6 387 aaPredicted RBP8.8□□□□□ -1
LINC00535-204ENST00000520513 SETDB2Q96T68 719 aa8.8□□□□□ -1
LINC00535-204ENST00000520513 AKAP4Q5JQC9 854 aa8.79□□□□□ -1
LINC00535-204ENST00000520513 FBXL6Q8N531 539 aa8.79□□□□□ -1
LINC00535-204ENST00000520513 EZH1Q92800 747 aaPredicted RBP8.79□□□□□ -1
LINC00535-204ENST00000520513 FAM105AQ9NUU6 356 aa8.79□□□□□ -1
LINC00535-204ENST00000520513 FAM95CA0A1B0GW59 222 aa8.78□□□□□ -1
LINC00535-204ENST00000520513 TREHO43280 583 aa8.78□□□□□ -1
LINC00535-204ENST00000520513 HP1BP3Q5SSJ5 553 aaPredicted RBP8.78□□□□□ -1
LINC00535-204ENST00000520513 NPM2Q86SE8 214 aaKnown RBP8.78□□□□□ -1
LINC00535-204ENST00000520513 WDR18Q9BV38 432 aa8.78□□□□□ -1
LINC00535-204ENST00000520513 KRTAP9-2Q9BYQ4 174 aa8.78□□□□□ -1
LINC00535-204ENST00000520513 GSX1Q9H4S2 264 aaPredicted RBP8.78□□□□□ -1
LINC00535-204ENST00000520513 PPP1R9AQ9ULJ8 1098 aa8.78□□□□□ -1
LINC00535-204ENST00000520513 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.77□□□□□ -1.01
LINC00535-204ENST00000520513 DYNC1LI2O43237 492 aaPredicted RBP8.77□□□□□ -1.01
LINC00535-204ENST00000520513 MAPK1P28482 360 aa8.77□□□□□ -1.01
LINC00535-204ENST00000520513 USP11P51784 963 aa8.77□□□□□ -1.01
LINC00535-204ENST00000520513 FCGRTP55899 365 aa8.77□□□□□ -1.01
LINC00535-204ENST00000520513 NFKBIBQ15653 356 aa8.77□□□□□ -1.01
LINC00535-204ENST00000520513 GIMAP7Q8NHV1 300 aa8.77□□□□□ -1.01
LINC00535-204ENST00000520513 STK35Q8TDR2 534 aa8.77□□□□□ -1.01
LINC00535-204ENST00000520513 BCO2Q9BYV7 579 aa8.77□□□□□ -1.01
LINC00535-204ENST00000520513 ZC3H12CQ9C0D7 883 aaKnown RBP8.77□□□□□ -1.01
LINC00535-204ENST00000520513 CCDC86Q9H6F5 360 aaKnown RBP8.77□□□□□ -1.01
LINC00535-204ENST00000520513 PRKAG2Q9UGJ0 569 aa8.77□□□□□ -1.01
LINC00535-204ENST00000520513 PNMA6FA0A0J9YX94 578 aa8.76□□□□□ -1.01
LINC00535-204ENST00000520513 AOC2O75106 756 aa8.76□□□□□ -1.01
LINC00535-204ENST00000520513 NFICP08651 508 aa8.76□□□□□ -1.01
LINC00535-204ENST00000520513 LIG1P18858 919 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms