RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 CHAF1AQ13111 956 aaPredicted RBP21.53■■□□□ 1.04
SDC2-202ENST00000518385 COL4A1P02462 1669 aa21.52■■□□□ 1.04
SDC2-202ENST00000518385 NRXN2Q9P2S2 1712 aa21.52■■□□□ 1.04
SDC2-202ENST00000518385 SYT1P21579 422 aa21.52■■□□□ 1.04
SDC2-202ENST00000518385 ZAP70P43403 619 aa21.52■■□□□ 1.04
SDC2-202ENST00000518385 RBM10P98175 930 aaKnown RBP21.52■■□□□ 1.04
SDC2-202ENST00000518385 DNTTIP2Q5QJE6 756 aaKnown RBP21.52■■□□□ 1.04
SDC2-202ENST00000518385 FOXD4L5Q5VV16 416 aaPredicted RBP21.52■■□□□ 1.04
SDC2-202ENST00000518385 FOXD4L4Q8WXT5 416 aaPredicted RBP21.52■■□□□ 1.04
SDC2-202ENST00000518385 APPBP2Q92624 585 aa21.52■■□□□ 1.04
SDC2-202ENST00000518385 SEC62Q99442 399 aaKnown RBP21.52■■□□□ 1.04
SDC2-202ENST00000518385 CTNNA3Q9UI47 895 aa21.52■■□□□ 1.04
SDC2-202ENST00000518385 TAF1P21675 1872 aa21.51■■□□□ 1.03
SDC2-202ENST00000518385 CCDC102BQ68D86 513 aa21.51■■□□□ 1.03
SDC2-202ENST00000518385 MSL1Q68DK7 614 aa21.51■■□□□ 1.03
SDC2-202ENST00000518385 HELBQ8NG08 1087 aaPredicted RBP21.51■■□□□ 1.03
SDC2-202ENST00000518385 NEK1Q96PY6 1258 aa21.51■■□□□ 1.03
SDC2-202ENST00000518385 BRIP1Q9BX63 1249 aa21.51■■□□□ 1.03
SDC2-202ENST00000518385 MAST3O60307 1309 aa21.51■■□□□ 1.03
SDC2-202ENST00000518385 CAVIN2O95810 425 aa21.5■■□□□ 1.03
SDC2-202ENST00000518385 CCDC192P0DO97 292 aa21.5■■□□□ 1.03
SDC2-202ENST00000518385 MCAMP43121 646 aa21.5■■□□□ 1.03
SDC2-202ENST00000518385 CHRNDQ07001 517 aa21.5■■□□□ 1.03
SDC2-202ENST00000518385 NOL8Q76FK4 1167 aaKnown RBP21.5■■□□□ 1.03
SDC2-202ENST00000518385 AKAP11Q9UKA4 1901 aa21.5■■□□□ 1.03
SDC2-202ENST00000518385 HSPD1P10809 573 aaKnown RBP21.49■■□□□ 1.03
SDC2-202ENST00000518385 GRAPQ13588 217 aa21.49■■□□□ 1.03
SDC2-202ENST00000518385 UTP14CQ5TAP6 766 aaKnown RBP21.49■■□□□ 1.03
SDC2-202ENST00000518385 CCDC129Q6ZRS4 1044 aa21.49■■□□□ 1.03
SDC2-202ENST00000518385 GRAPLQ8TC17 118 aaPredicted RBP21.49■■□□□ 1.03
SDC2-202ENST00000518385 MINPP1Q9UNW1 487 aa21.49■■□□□ 1.03
SDC2-202ENST00000518385 SCARF1Q14162 830 aa21.48■■□□□ 1.03
SDC2-202ENST00000518385 UBE3CQ15386 1083 aa21.48■■□□□ 1.03
SDC2-202ENST00000518385 RPGRQ92834 1020 aaKnown RBP21.48■■□□□ 1.03
SDC2-202ENST00000518385 CNPY2Q9Y2B0 182 aa21.48■■□□□ 1.03
SDC2-202ENST00000518385 KIF3AQ9Y496 699 aa21.48■■□□□ 1.03
SDC2-202ENST00000518385 MYH7P12883 1935 aa21.48■■□□□ 1.03
SDC2-202ENST00000518385 CYP21A2P08686 494 aa21.48■■□□□ 1.03
SDC2-202ENST00000518385 HOXA10P31260 410 aaPredicted RBP21.48■■□□□ 1.03
SDC2-202ENST00000518385 SYCP1Q15431 976 aa21.48■■□□□ 1.03
SDC2-202ENST00000518385 OSBP2Q969R2 916 aa21.48■■□□□ 1.03
SDC2-202ENST00000518385 RBM17Q96I25 401 aaKnown RBP21.48■■□□□ 1.03
SDC2-202ENST00000518385 TCHHQ07283 1943 aa21.47■■□□□ 1.03
SDC2-202ENST00000518385 CPA1P15085 419 aa21.47■■□□□ 1.03
SDC2-202ENST00000518385 SLC16A10Q8TF71 515 aa21.47■■□□□ 1.03
SDC2-202ENST00000518385 UPF1Q92900 1129 aaKnown RBP eCLIP21.47■■□□□ 1.03
SDC2-202ENST00000518385 ADD2P35612 726 aa21.46■■□□□ 1.03
SDC2-202ENST00000518385 WASHC4Q2M389 1173 aa21.46■■□□□ 1.03
SDC2-202ENST00000518385 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.46■■□□□ 1.03
SDC2-202ENST00000518385 CHMP4CQ96CF2 233 aa21.46■■□□□ 1.03
SDC2-202ENST00000518385 PDGFDQ9GZP0 370 aaPredicted RBP21.46■■□□□ 1.03
SDC2-202ENST00000518385 MTMR6Q9Y217 621 aa21.46■■□□□ 1.03
SDC2-202ENST00000518385 M0R2C6 588 aa21.45■■□□□ 1.02
SDC2-202ENST00000518385 PHKA1P46020 1223 aa21.45■■□□□ 1.02
SDC2-202ENST00000518385 CRAMP1Q96RY5 1269 aa21.45■■□□□ 1.02
SDC2-202ENST00000518385 ANKRD2Q9GZV1 360 aa21.45■■□□□ 1.02
SDC2-202ENST00000518385 CHGBP05060 677 aa21.44■■□□□ 1.02
SDC2-202ENST00000518385 PDE6BP35913 854 aa21.44■■□□□ 1.02
SDC2-202ENST00000518385 KRT85P78386 507 aa21.44■■□□□ 1.02
SDC2-202ENST00000518385 UBE4AQ14139 1066 aa21.44■■□□□ 1.02
SDC2-202ENST00000518385 SPATA5Q8NB90 893 aa21.44■■□□□ 1.02
SDC2-202ENST00000518385 KIAA1524Q8TCG1 905 aa21.44■■□□□ 1.02
SDC2-202ENST00000518385 ANKRD31Q8N7Z5 1873 aa21.44■■□□□ 1.02
SDC2-202ENST00000518385 BBOX1O75936 387 aa21.44■■□□□ 1.02
SDC2-202ENST00000518385 ME3Q16798 604 aa21.44■■□□□ 1.02
SDC2-202ENST00000518385 DHX32Q7L7V1 743 aaKnown RBP21.44■■□□□ 1.02
SDC2-202ENST00000518385 FBXL16Q8N461 479 aa21.44■■□□□ 1.02
SDC2-202ENST00000518385 FAM200AQ8TCP9 573 aa21.44■■□□□ 1.02
SDC2-202ENST00000518385 CHAMP1Q96JM3 812 aa21.44■■□□□ 1.02
SDC2-202ENST00000518385 SCAND2PQ9GZW5 306 aaPredicted RBP21.44■■□□□ 1.02
SDC2-202ENST00000518385 SNAP23O00161 211 aa21.43■■□□□ 1.02
SDC2-202ENST00000518385 TOB2Q14106 344 aaPredicted RBP21.43■■□□□ 1.02
SDC2-202ENST00000518385 IMMTQ16891 758 aaKnown RBP21.43■■□□□ 1.02
SDC2-202ENST00000518385 DDX19AQ9NUU7 478 aaKnown RBP21.43■■□□□ 1.02
SDC2-202ENST00000518385 TPCN1Q9ULQ1 816 aa21.43■■□□□ 1.02
SDC2-202ENST00000518385 ZBTB22O15209 634 aa21.42■■□□□ 1.02
SDC2-202ENST00000518385 SRGNP10124 158 aa21.42■■□□□ 1.02
SDC2-202ENST00000518385 GJB2P29033 226 aa21.42■■□□□ 1.02
SDC2-202ENST00000518385 MAP3K12Q12852 859 aa21.42■■□□□ 1.02
SDC2-202ENST00000518385 SLC9C2Q5TAH2 1124 aa21.42■■□□□ 1.02
SDC2-202ENST00000518385 GDPD2Q9HCC8 539 aa21.42■■□□□ 1.02
SDC2-202ENST00000518385 GNL3LQ9NVN8 582 aaKnown RBP21.42■■□□□ 1.02
SDC2-202ENST00000518385 NPR1P16066 1061 aa21.41■■□□□ 1.02
SDC2-202ENST00000518385 CCDC83Q8IWF9 413 aa21.41■■□□□ 1.02
SDC2-202ENST00000518385 TAF6LQ9Y6J9 622 aa21.41■■□□□ 1.02
SDC2-202ENST00000518385 A0A1B0GUL6 1792 aa21.41■■□□□ 1.02
SDC2-202ENST00000518385 GPAA1O43292 621 aa21.4■■□□□ 1.02
SDC2-202ENST00000518385 LARGE1O95461 756 aa21.4■■□□□ 1.02
SDC2-202ENST00000518385 MAP3K11Q16584 847 aa21.4■■□□□ 1.02
SDC2-202ENST00000518385 PI16Q6UXB8 463 aa21.4■■□□□ 1.02
SDC2-202ENST00000518385 AGXT2Q9BYV1 514 aa21.4■■□□□ 1.02
SDC2-202ENST00000518385 GTPBP4Q9BZE4 634 aaKnown RBP21.4■■□□□ 1.02
SDC2-202ENST00000518385 PIH1D3Q9NQM4 214 aaKnown RBP21.4■■□□□ 1.02
SDC2-202ENST00000518385 E7EWF7 191 aa21.4■■□□□ 1.02
SDC2-202ENST00000518385 FIBPO43427 364 aa21.4■■□□□ 1.02
SDC2-202ENST00000518385 PDE6AP16499 860 aa21.4■■□□□ 1.02
SDC2-202ENST00000518385 EXOSC10Q01780 885 aaKnown RBP21.4■■□□□ 1.02
SDC2-202ENST00000518385 PUS7LQ9H0K6 701 aaKnown RBP21.4■■□□□ 1.02
SDC2-202ENST00000518385 NUP62CLQ9H1M0 184 aa21.4■■□□□ 1.02
SDC2-202ENST00000518385 ZNF804BA4D1E1 1349 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms