RNA–Protein interactions for RNA: ENST00000516816.1

RNU1-40P-201, Transcript of RNA, U1 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU1-40P, Length 164 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-40P-201ENST00000516816 POLR3DP05423 398 aaPredicted RBP2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 CCDC175P0C221 793 aa2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 PCP11498 1178 aaKnown RBP2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 ERCC5P28715 1186 aaPredicted RBP2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 PDIA3P30101 505 aaKnown RBP2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 MNX1P50219 401 aaPredicted RBP2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 METAP2P50579 478 aaKnown RBP eCLIP2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 ETF1P62495 437 aaKnown RBP2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 CCT2P78371 535 aaKnown RBP2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 EXOSC10Q01780 885 aaKnown RBP2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 MYL5Q02045 173 aa2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 TFCP2Q12800 502 aa2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 TRIM14Q14142 442 aa2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 SLC39A14Q15043 492 aa2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 BRD3Q15059 726 aa2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 NKX1-1Q15270 411 aaPredicted RBP2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 CWF19L2Q2TBE0 894 aaKnown RBP2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 KIF4BQ2VIQ3 1234 aa2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 ADCK5Q3MIX3 580 aa2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 ARHGAP29Q52LW3 1261 aa2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 TNNI3KQ59H18 835 aa2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 ANO1Q5XXA6 986 aa2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 TSHZ3Q63HK5 1081 aa2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 LMBR1LQ6UX01 489 aa2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 RBM43Q6ZSC3 357 aaKnown RBP2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 UBE3BQ7Z3V4 1068 aa2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 TMC6Q7Z403 805 aa2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 TTC6Q86TZ1 520 aa2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 IQCA1Q86XH1 822 aa2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 TMTC1Q8IUR5 882 aa2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 GPIHBP1Q8IV16 184 aa2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 UNC5CLQ8IV45 518 aa2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 CNGA4Q8IV77 575 aa2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 FAM114A1Q8IWE2 563 aa2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 RASEFQ8IZ41 740 aa2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 FBXL16Q8N461 479 aa2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 MPNDQ8N594 471 aa2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 EHBP1Q8NDI1 1231 aa2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 FBXO18Q8NFZ0 1043 aa2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 RASSF8Q8NHQ8 419 aa2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 CTCFLQ8NI51 663 aaPredicted RBP2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 XAGE3Q8WTP9 111 aa2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 ANKRD7Q92527 254 aa2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 GOLGA1Q92805 767 aa2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 AIDAQ96BJ3 306 aa2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 EAF2Q96CJ1 260 aaPredicted RBP2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 CCDC51Q96ER9 411 aa2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 L3MBTL3Q96JM7 780 aaPredicted RBP2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 RPGRIP1Q96KN7 1286 aa2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 BAG1Q99933 345 aaPredicted RBP2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 LARP6Q9BRS8 491 aaKnown RBP2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 UTP14AQ9BVJ6 771 aaKnown RBP2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 NUP58Q9BVL2 599 aa2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 OSBPL5Q9H0X9 879 aaPredicted RBP2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 SLC52A2Q9HAB3 445 aa2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 ZNF287Q9HBT7 754 aa2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 EIF4ENIF1Q9NRA8 985 aaKnown RBP2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 CNNM1Q9NRU3 951 aa2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 TOMM22Q9NS69 142 aa2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 TRMT1Q9NXH9 659 aaKnown RBP2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 EIF2AK3Q9NZJ5 1116 aaKnown RBP2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 IFNKQ9P0W0 207 aa2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 MYO1AQ9UBC5 1043 aa2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 ORC3Q9UBD5 711 aaPredicted RBP2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 MKRN1Q9UHC7 482 aaKnown RBP2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 DNAI1Q9UI46 699 aa2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 DDX41Q9UJV9 622 aaKnown RBP2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 MYO6Q9UM54 1294 aa2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 PCDHA7Q9UN72 937 aa2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 NSFL1CQ9UNZ2 370 aaKnown RBP2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 SLC12A7Q9Y666 1083 aa2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 FPGT-TNNI3KV9GXZ4 949 aa2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 C3P01024 1663 aa2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 PHLPP2Q6ZVD8 1323 aa2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 SALL3Q9BXA9 1300 aa2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 RPAP1Q9BWH6 1393 aaPredicted RBP2.36□□□□□ -2.03
RNU1-40P-201ENST00000516816 KLF18A0A0U1RQI7 1052 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 A0A1B0GVL5 298 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 BICDL2A1A5D9 508 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 CTAGE9A4FU28 777 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 HMGB1P1B2RPK0 211 aaPredicted RBP2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 AKR1B15C9JRZ8 316 aaPredicted RBP2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 H7C1D1 291 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 H7C1W4 665 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 EYA2O00167 538 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 IFIT3O14879 490 aaKnown RBP2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 NPHP1O15259 732 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 POLR3GO15318 223 aaPredicted RBP2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 PRC1O43663 620 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 KRT86O43790 486 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 OPA1O60313 960 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 MARCH6O60337 910 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 SASH1O94885 1247 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 ERLIN2O94905 339 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 DEXIO95424 95 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 MYL1P05976 194 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 HSPD1P10809 573 aaKnown RBP2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 SLC5A1P13866 664 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 CPA1P15085 419 aa2.35□□□□□ -2.03
RNU1-40P-201ENST00000516816 LIG1P18858 919 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms