RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 BRAPQ7Z569 592 aa14.98□□□□□ -0.01
TCOF1-214ENST00000515035 CACNA2D3Q8IZS8 1091 aa14.98□□□□□ -0.01
TCOF1-214ENST00000515035 STX8Q9UNK0 236 aa14.98□□□□□ -0.01
TCOF1-214ENST00000515035 A0A1B0GVL5 298 aa14.98□□□□□ -0.01
TCOF1-214ENST00000515035 TMEM110-MUSTN1A8MSY1 372 aa14.98□□□□□ -0.01
TCOF1-214ENST00000515035 TNNQ9UQP3 1299 aa14.98□□□□□ -0.01
TCOF1-214ENST00000515035 GJC1P36383 396 aa14.97□□□□□ -0.01
TCOF1-214ENST00000515035 PSMC4P43686 418 aa14.97□□□□□ -0.01
TCOF1-214ENST00000515035 DCTPP1Q9H773 170 aa14.97□□□□□ -0.01
TCOF1-214ENST00000515035 BCL2L12Q9HB09 334 aa14.97□□□□□ -0.01
TCOF1-214ENST00000515035 MRVI1Q9Y6F6 885 aa14.97□□□□□ -0.01
TCOF1-214ENST00000515035 RLBP1P12271 317 aa14.97□□□□□ -0.01
TCOF1-214ENST00000515035 ZNF75DP51815 510 aa14.97□□□□□ -0.01
TCOF1-214ENST00000515035 C8orf74Q6P047 294 aa14.97□□□□□ -0.01
TCOF1-214ENST00000515035 CCDC110Q8TBZ0 833 aa14.97□□□□□ -0.01
TCOF1-214ENST00000515035 CNNM2Q9H8M5 875 aa14.97□□□□□ -0.01
TCOF1-214ENST00000515035 UHRF1BP1Q6BDS2 1440 aa14.97□□□□□ -0.01
TCOF1-214ENST00000515035 C6orf229H3BNL8 230 aa14.97□□□□□ -0.01
TCOF1-214ENST00000515035 MAP2K2P36507 400 aa14.97□□□□□ -0.01
TCOF1-214ENST00000515035 CCDC50Q8IVM0 306 aa14.97□□□□□ -0.01
TCOF1-214ENST00000515035 ESR2Q92731 530 aa14.97□□□□□ -0.01
TCOF1-214ENST00000515035 TSGA10Q9BZW7 698 aa14.97□□□□□ -0.01
TCOF1-214ENST00000515035 SAMM50Q9Y512 469 aa14.97□□□□□ -0.01
TCOF1-214ENST00000515035 TRPM2O94759 1503 aa14.97□□□□□ -0.01
TCOF1-214ENST00000515035 ANXA1P04083 346 aa14.97□□□□□ -0.01
TCOF1-214ENST00000515035 MAP7D1Q3KQU3 841 aa14.97□□□□□ -0.01
TCOF1-214ENST00000515035 PNMA8AQ86V59 439 aaPredicted RBP14.97□□□□□ -0.01
TCOF1-214ENST00000515035 CABS1Q96KC9 395 aa14.97□□□□□ -0.01
TCOF1-214ENST00000515035 SYNCQ9H7C4 482 aa14.97□□□□□ -0.01
TCOF1-214ENST00000515035 GIGYF1O75420 1035 aaPredicted RBP14.96□□□□□ -0.01
TCOF1-214ENST00000515035 ZSCAN26Q16670 478 aa14.96□□□□□ -0.01
TCOF1-214ENST00000515035 CREB3L3Q68CJ9 461 aa14.96□□□□□ -0.01
TCOF1-214ENST00000515035 USP37Q86T82 979 aa14.96□□□□□ -0.01
TCOF1-214ENST00000515035 IGSF22Q8N9C0 903 aa14.96□□□□□ -0.01
TCOF1-214ENST00000515035 RAB3IL1Q8TBN0 382 aa14.96□□□□□ -0.01
TCOF1-214ENST00000515035 MKRN1Q9UHC7 482 aaKnown RBP14.96□□□□□ -0.01
TCOF1-214ENST00000515035 TTF2Q9UNY4 1162 aaKnown RBP14.96□□□□□ -0.01
TCOF1-214ENST00000515035 ATP6V0A2Q9Y487 856 aa14.96□□□□□ -0.01
TCOF1-214ENST00000515035 PPP1R7Q15435 360 aa14.96□□□□□ -0.01
TCOF1-214ENST00000515035 IFIT1BQ5T764 474 aaKnown RBP14.96□□□□□ -0.01
TCOF1-214ENST00000515035 LMTK3Q96Q04 1460 aa14.96□□□□□ -0.01
TCOF1-214ENST00000515035 EEF2P13639 858 aaKnown RBP14.96□□□□□ -0.01
TCOF1-214ENST00000515035 ST5P78524 1137 aa14.96□□□□□ -0.01
TCOF1-214ENST00000515035 APOBRQ0VD83 1088 aa14.96□□□□□ -0.01
TCOF1-214ENST00000515035 PLEKHM2Q8IWE5 1019 aa14.96□□□□□ -0.01
TCOF1-214ENST00000515035 PRAG1Q86YV5 1406 aa14.96□□□□□ -0.01
TCOF1-214ENST00000515035 NEDD9Q14511 834 aa14.96□□□□□ -0.02
TCOF1-214ENST00000515035 AKAP4Q5JQC9 854 aa14.96□□□□□ -0.02
TCOF1-214ENST00000515035 MRPL50Q8N5N7 158 aaKnown RBP14.96□□□□□ -0.02
TCOF1-214ENST00000515035 LDHCP07864 332 aa14.95□□□□□ -0.02
TCOF1-214ENST00000515035 IL2RBP14784 551 aa14.95□□□□□ -0.02
TCOF1-214ENST00000515035 KCNA6P17658 529 aa14.95□□□□□ -0.02
TCOF1-214ENST00000515035 ATL3Q6DD88 541 aa14.95□□□□□ -0.02
TCOF1-214ENST00000515035 CCDC26Q8TAB7 109 aa14.95□□□□□ -0.02
TCOF1-214ENST00000515035 SWAP70Q9UH65 585 aa14.95□□□□□ -0.02
TCOF1-214ENST00000515035 GOLGA6BA6NDN3 693 aa14.95□□□□□ -0.02
TCOF1-214ENST00000515035 RUFY3Q7L099 469 aa14.95□□□□□ -0.02
TCOF1-214ENST00000515035 TSC1Q92574 1164 aa14.95□□□□□ -0.02
TCOF1-214ENST00000515035 FLT4P35916 1363 aa14.95□□□□□ -0.02
TCOF1-214ENST00000515035 CCT6AP40227 531 aaKnown RBP14.95□□□□□ -0.02
TCOF1-214ENST00000515035 JARID2Q92833 1246 aaPredicted RBP14.95□□□□□ -0.02
TCOF1-214ENST00000515035 MTUS1Q9ULD2 1270 aa14.95□□□□□ -0.02
TCOF1-214ENST00000515035 CIB2O75838 187 aa14.95□□□□□ -0.02
TCOF1-214ENST00000515035 UQCRFS1P1P0C7P4 283 aa14.95□□□□□ -0.02
TCOF1-214ENST00000515035 BICD1Q96G01 975 aa14.95□□□□□ -0.02
TCOF1-214ENST00000515035 CBX8Q9HC52 389 aa14.95□□□□□ -0.02
TCOF1-214ENST00000515035 ELP1O95163 1332 aa14.95□□□□□ -0.02
TCOF1-214ENST00000515035 CHMLP26374 656 aa14.94□□□□□ -0.02
TCOF1-214ENST00000515035 IQUBQ8NA54 791 aa14.94□□□□□ -0.02
TCOF1-214ENST00000515035 NBPF6Q5VWK0 638 aa14.94□□□□□ -0.02
TCOF1-214ENST00000515035 NBPF5PQ86XG9 351 aaPredicted RBP14.94□□□□□ -0.02
TCOF1-214ENST00000515035 NBPF4Q96M43 638 aa14.94□□□□□ -0.02
TCOF1-214ENST00000515035 TSNAXIP1Q2TAA8 658 aa14.94□□□□□ -0.02
TCOF1-214ENST00000515035 ANKRD13DQ6ZTN6 518 aa14.94□□□□□ -0.02
TCOF1-214ENST00000515035 CHST3Q7LGC8 479 aa14.94□□□□□ -0.02
TCOF1-214ENST00000515035 ASXL1Q8IXJ9 1541 aa14.94□□□□□ -0.02
TCOF1-214ENST00000515035 TPD52P55327 224 aaPredicted RBP14.94□□□□□ -0.02
TCOF1-214ENST00000515035 SLC4A8Q2Y0W8 1093 aa14.94□□□□□ -0.02
TCOF1-214ENST00000515035 HEATR3Q7Z4Q2 680 aa14.94□□□□□ -0.02
TCOF1-214ENST00000515035 ARL1P40616 181 aaPredicted RBP14.93□□□□□ -0.02
TCOF1-214ENST00000515035 FANCCQ00597 558 aa14.93□□□□□ -0.02
TCOF1-214ENST00000515035 UTP14CQ5TAP6 766 aaKnown RBP14.93□□□□□ -0.02
TCOF1-214ENST00000515035 TTC41PQ6P2S7 1318 aa14.93□□□□□ -0.02
TCOF1-214ENST00000515035 CLSTN2Q9H4D0 955 aa14.93□□□□□ -0.02
TCOF1-214ENST00000515035 BAG3O95817 575 aa14.93□□□□□ -0.02
TCOF1-214ENST00000515035 ATP5DP30049 168 aa14.93□□□□□ -0.02
TCOF1-214ENST00000515035 DHX32Q7L7V1 743 aaKnown RBP14.93□□□□□ -0.02
TCOF1-214ENST00000515035 JAKMIP2Q96AA8 810 aa14.93□□□□□ -0.02
TCOF1-214ENST00000515035 ZBTB40Q9NUA8 1239 aa14.93□□□□□ -0.02
TCOF1-214ENST00000515035 RNF123Q5XPI4 1314 aa14.93□□□□□ -0.02
TCOF1-214ENST00000515035 KIF3CO14782 793 aa14.93□□□□□ -0.02
TCOF1-214ENST00000515035 ATP2A2P16615 1042 aaKnown RBP14.93□□□□□ -0.02
TCOF1-214ENST00000515035 GNAQP50148 359 aa14.93□□□□□ -0.02
TCOF1-214ENST00000515035 RPUSD2Q8IZ73 545 aaKnown RBP14.93□□□□□ -0.02
TCOF1-214ENST00000515035 NPATQ14207 1427 aa14.93□□□□□ -0.02
TCOF1-214ENST00000515035 ARHGAP6O43182 974 aa14.92□□□□□ -0.02
TCOF1-214ENST00000515035 ATP6V1AP38606 617 aa14.92□□□□□ -0.02
TCOF1-214ENST00000515035 PPFIA1Q13136 1202 aa14.92□□□□□ -0.02
TCOF1-214ENST00000515035 CEP85LQ5SZL2 805 aa14.92□□□□□ -0.02
TCOF1-214ENST00000515035 CEP85Q6P2H3 762 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms