RNA–Protein interactions for RNA: ENST00000514949.1

SNX2-213, Transcript of sorting nexin 2, humanhuman

TSL 2 BASIC

Gene SNX2, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-213ENST00000514949 LRP5O75197 1615 aa20.41■□□□□ 0.86
SNX2-213ENST00000514949 SYNE4Q8N205 404 aa20.41■□□□□ 0.86
SNX2-213ENST00000514949 ZMYM6O95789 1325 aa20.4■□□□□ 0.86
SNX2-213ENST00000514949 CHAF1AQ13111 956 aaPredicted RBP20.4■□□□□ 0.86
SNX2-213ENST00000514949 ALX1Q15699 326 aa20.4■□□□□ 0.86
SNX2-213ENST00000514949 AK7Q96M32 723 aa20.4■□□□□ 0.86
SNX2-213ENST00000514949 BPIFA3Q9BQP9 254 aa20.4■□□□□ 0.86
SNX2-213ENST00000514949 NAT10Q9H0A0 1025 aaKnown RBP20.4■□□□□ 0.86
SNX2-213ENST00000514949 ANGEL1Q9UNK9 670 aaKnown RBP20.4■□□□□ 0.86
SNX2-213ENST00000514949 IRS4O14654 1257 aaPredicted RBP20.39■□□□□ 0.86
SNX2-213ENST00000514949 CPLX1O14810 134 aa20.39■□□□□ 0.86
SNX2-213ENST00000514949 PDE8AO60658 829 aa20.39■□□□□ 0.86
SNX2-213ENST00000514949 UQCRFS1P1P0C7P4 283 aa20.39■□□□□ 0.86
SNX2-213ENST00000514949 LRMPQ12912 555 aa20.39■□□□□ 0.86
SNX2-213ENST00000514949 TRDNQ13061 729 aa20.39■□□□□ 0.86
SNX2-213ENST00000514949 SLC9C2Q5TAH2 1124 aa20.39■□□□□ 0.86
SNX2-213ENST00000514949 CEP57L1Q8IYX8 460 aa20.39■□□□□ 0.86
SNX2-213ENST00000514949 SLC4A9Q96Q91 983 aa20.39■□□□□ 0.86
SNX2-213ENST00000514949 CNNM1Q9NRU3 951 aa20.39■□□□□ 0.86
SNX2-213ENST00000514949 CLIC4Q9Y696 253 aa20.39■□□□□ 0.86
SNX2-213ENST00000514949 NEDD4P46934 1319 aa20.39■□□□□ 0.86
SNX2-213ENST00000514949 NUP98P52948 1817 aa20.39■□□□□ 0.85
SNX2-213ENST00000514949 SPTLC2O15270 562 aa20.39■□□□□ 0.85
SNX2-213ENST00000514949 KIF23Q02241 960 aaPredicted RBP20.39■□□□□ 0.85
SNX2-213ENST00000514949 STK38Q15208 465 aa20.39■□□□□ 0.85
SNX2-213ENST00000514949 CACTINQ8WUQ7 758 aaKnown RBP20.39■□□□□ 0.85
SNX2-213ENST00000514949 STRCQ7RTU9 1775 aa20.39■□□□□ 0.85
SNX2-213ENST00000514949 ARAP2Q8WZ64 1704 aa20.38■□□□□ 0.85
SNX2-213ENST00000514949 TCRBV5S4A2TA0A5A2 114 aa20.38■□□□□ 0.85
SNX2-213ENST00000514949 PPFIA3O75145 1194 aa20.38■□□□□ 0.85
SNX2-213ENST00000514949 CCDC144BQ3MJ40 725 aa20.38■□□□□ 0.85
SNX2-213ENST00000514949 CCDC144CPQ8IYA2 1237 aa20.38■□□□□ 0.85
SNX2-213ENST00000514949 PIH1D3Q9NQM4 214 aaKnown RBP20.38■□□□□ 0.85
SNX2-213ENST00000514949 BECN2A8MW95 431 aa20.38■□□□□ 0.85
SNX2-213ENST00000514949 SH2B2O14492 632 aaPredicted RBP20.38■□□□□ 0.85
SNX2-213ENST00000514949 FGFR2P21802 821 aa20.38■□□□□ 0.85
SNX2-213ENST00000514949 GPTP24298 496 aa20.38■□□□□ 0.85
SNX2-213ENST00000514949 NDUFA8P51970 172 aa20.38■□□□□ 0.85
SNX2-213ENST00000514949 RBM6P78332 1123 aaKnown RBP20.38■□□□□ 0.85
SNX2-213ENST00000514949 OTUD7BQ6GQQ9 843 aa20.38■□□□□ 0.85
SNX2-213ENST00000514949 TMEM87BQ96K49 555 aa20.38■□□□□ 0.85
SNX2-213ENST00000514949 KIAA1468Q9P260 1216 aa20.38■□□□□ 0.85
SNX2-213ENST00000514949 CTIFO43310 598 aaKnown RBP20.37■□□□□ 0.85
SNX2-213ENST00000514949 CDKL5O76039 1030 aa20.37■□□□□ 0.85
SNX2-213ENST00000514949 CMA1P23946 247 aa20.37■□□□□ 0.85
SNX2-213ENST00000514949 AXDND1Q5T1B0 1012 aaPredicted RBP20.37■□□□□ 0.85
SNX2-213ENST00000514949 ANO1Q5XXA6 986 aa20.37■□□□□ 0.85
SNX2-213ENST00000514949 CCDC102BQ68D86 513 aa20.37■□□□□ 0.85
SNX2-213ENST00000514949 TBC1D10CQ8IV04 446 aa20.37■□□□□ 0.85
SNX2-213ENST00000514949 LRRC8AQ8IWT6 810 aa20.37■□□□□ 0.85
SNX2-213ENST00000514949 IL6STP40189 918 aaPredicted RBP20.36■□□□□ 0.85
SNX2-213ENST00000514949 SF3A1Q15459 793 aaKnown RBP20.36■□□□□ 0.85
SNX2-213ENST00000514949 ZNF34Q8IZ26 560 aa20.36■□□□□ 0.85
SNX2-213ENST00000514949 ZNF710Q8N1W2 664 aa20.36■□□□□ 0.85
SNX2-213ENST00000514949 LPIN2Q92539 896 aa20.36■□□□□ 0.85
SNX2-213ENST00000514949 SDF4Q9BRK5 362 aa20.36■□□□□ 0.85
SNX2-213ENST00000514949 TRMT112Q9UI30 125 aaKnown RBP20.36■□□□□ 0.85
SNX2-213ENST00000514949 MROH5Q6ZUA9 1318 aa20.36■□□□□ 0.85
SNX2-213ENST00000514949 A0A1B0GVL5 298 aa20.36■□□□□ 0.85
SNX2-213ENST00000514949 POLR3DP05423 398 aaPredicted RBP20.36■□□□□ 0.85
SNX2-213ENST00000514949 PDE6AP16499 860 aa20.36■□□□□ 0.85
SNX2-213ENST00000514949 PUM3Q15397 648 aaKnown RBP20.36■□□□□ 0.85
SNX2-213ENST00000514949 SYNE3Q6ZMZ3 975 aa20.36■□□□□ 0.85
SNX2-213ENST00000514949 SGMS1Q86VZ5 419 aa20.36■□□□□ 0.85
SNX2-213ENST00000514949 TBC1D2BQ9UPU7 963 aa20.36■□□□□ 0.85
SNX2-213ENST00000514949 MYO5AQ9Y4I1 1855 aaKnown RBP20.36■□□□□ 0.85
SNX2-213ENST00000514949 KIF28PB7ZC32 967 aa20.35■□□□□ 0.85
SNX2-213ENST00000514949 SLC39A14Q15043 492 aa20.35■□□□□ 0.85
SNX2-213ENST00000514949 CYB5R4Q7L1T6 521 aa20.35■□□□□ 0.85
SNX2-213ENST00000514949 TIGD1Q96MW7 591 aa20.35■□□□□ 0.85
SNX2-213ENST00000514949 STRBPQ96SI9 672 aaKnown RBP20.35■□□□□ 0.85
SNX2-213ENST00000514949 ZNF532Q9HCE3 1301 aa20.35■□□□□ 0.85
SNX2-213ENST00000514949 RIOK3O14730 519 aaKnown RBP20.35■□□□□ 0.85
SNX2-213ENST00000514949 PHKA1P46020 1223 aa20.35■□□□□ 0.85
SNX2-213ENST00000514949 KCND1Q9NSA2 647 aa20.35■□□□□ 0.85
SNX2-213ENST00000514949 ZBTB1Q9Y2K1 713 aa20.35■□□□□ 0.85
SNX2-213ENST00000514949 APOA5Q6Q788 366 aa20.34■□□□□ 0.85
SNX2-213ENST00000514949 IGDCC4Q8TDY8 1250 aa20.34■□□□□ 0.85
SNX2-213ENST00000514949 DOCK2Q92608 1830 aa20.34■□□□□ 0.85
SNX2-213ENST00000514949 PLCH1Q4KWH8 1693 aa20.34■□□□□ 0.85
SNX2-213ENST00000514949 FAM237AA0A1B0GTK4 181 aa20.33■□□□□ 0.85
SNX2-213ENST00000514949 LIFRP42702 1097 aa20.33■□□□□ 0.85
SNX2-213ENST00000514949 METAP2P50579 478 aaKnown RBP eCLIP20.33■□□□□ 0.85
SNX2-213ENST00000514949 BTG4Q9NY30 223 aa20.33■□□□□ 0.85
SNX2-213ENST00000514949 PPP6R2O75170 966 aa20.33■□□□□ 0.84
SNX2-213ENST00000514949 IDH1O75874 414 aaKnown RBP20.33■□□□□ 0.84
SNX2-213ENST00000514949 ZNF202O95125 648 aa20.33■□□□□ 0.84
SNX2-213ENST00000514949 NTRK3Q16288 839 aa20.33■□□□□ 0.84
SNX2-213ENST00000514949 CPLX2Q6PUV4 134 aaKnown RBP20.33■□□□□ 0.84
SNX2-213ENST00000514949 NID2Q14112 1375 aa20.32■□□□□ 0.84
SNX2-213ENST00000514949 UBN2Q6ZU65 1347 aa20.32■□□□□ 0.84
SNX2-213ENST00000514949 PATL2C9JE40 543 aaKnown RBP20.32■□□□□ 0.84
SNX2-213ENST00000514949 NKX2-3Q8TAU0 364 aa20.32■□□□□ 0.84
SNX2-213ENST00000514949 OSBPL5Q9H0X9 879 aaPredicted RBP20.32■□□□□ 0.84
SNX2-213ENST00000514949 GJB4Q9NTQ9 266 aa20.32■□□□□ 0.84
SNX2-213ENST00000514949 WWC3Q9ULE0 1092 aa20.32■□□□□ 0.84
SNX2-213ENST00000514949 DENND2AQ9ULE3 1009 aa20.32■□□□□ 0.84
SNX2-213ENST00000514949 PAXBP1Q9Y5B6 917 aa20.32■□□□□ 0.84
SNX2-213ENST00000514949 COL14A1Q05707 1796 aaKnown RBP20.32■□□□□ 0.84
SNX2-213ENST00000514949 AOPEPQ8N6M6 819 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms