RNA–Protein interactions for RNA: ENST00000514755.5

UBE2D3-232, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-232ENST00000514755 ZNF454Q8N9F8 522 aa13.77□□□□□ -0.21
UBE2D3-232ENST00000514755 PANK1Q8TE04 598 aa13.77□□□□□ -0.21
UBE2D3-232ENST00000514755 YTHDC1Q96MU7 727 aaKnown RBP13.77□□□□□ -0.21
UBE2D3-232ENST00000514755 CD209Q9NNX6 404 aa13.77□□□□□ -0.21
UBE2D3-232ENST00000514755 MROH5Q6ZUA9 1318 aa13.76□□□□□ -0.21
UBE2D3-232ENST00000514755 PASKQ96RG2 1323 aa13.76□□□□□ -0.21
UBE2D3-232ENST00000514755 USP17L3A6NCW0 530 aa13.76□□□□□ -0.21
UBE2D3-232ENST00000514755 USP17L4A6NCW7 530 aa13.76□□□□□ -0.21
UBE2D3-232ENST00000514755 EYA2O00167 538 aa13.76□□□□□ -0.21
UBE2D3-232ENST00000514755 GNAI3P08754 354 aa13.76□□□□□ -0.21
UBE2D3-232ENST00000514755 METTL24Q5JXM2 366 aa13.76□□□□□ -0.21
UBE2D3-232ENST00000514755 DACT2Q5SW24 774 aa13.76□□□□□ -0.21
UBE2D3-232ENST00000514755 USP50Q70EL3 339 aaPredicted RBP13.76□□□□□ -0.21
UBE2D3-232ENST00000514755 USP17L1Q7RTZ2 530 aa13.76□□□□□ -0.21
UBE2D3-232ENST00000514755 ATG9AQ7Z3C6 839 aa13.76□□□□□ -0.21
UBE2D3-232ENST00000514755 FTSJ3Q8IY81 847 aaKnown RBP13.76□□□□□ -0.21
UBE2D3-232ENST00000514755 DPF2Q92785 391 aa13.76□□□□□ -0.21
UBE2D3-232ENST00000514755 GMLQ99445 158 aa13.76□□□□□ -0.21
UBE2D3-232ENST00000514755 SIL1Q9H173 461 aa13.76□□□□□ -0.21
UBE2D3-232ENST00000514755 C1orf115Q9H7X2 142 aa13.76□□□□□ -0.21
UBE2D3-232ENST00000514755 RCAN3Q9UKA8 241 aa13.76□□□□□ -0.21
UBE2D3-232ENST00000514755 PDE8BO95263 885 aa13.75□□□□□ -0.21
UBE2D3-232ENST00000514755 GYG1P46976 350 aa13.75□□□□□ -0.21
UBE2D3-232ENST00000514755 GTF2IP78347 998 aa13.75□□□□□ -0.21
UBE2D3-232ENST00000514755 UBE4AQ14139 1066 aa13.75□□□□□ -0.21
UBE2D3-232ENST00000514755 TBC1D10BQ4KMP7 808 aaPredicted RBP13.75□□□□□ -0.21
UBE2D3-232ENST00000514755 ITPRIPQ8IWB1 547 aa13.75□□□□□ -0.21
UBE2D3-232ENST00000514755 CNTROBQ8N137 903 aa13.75□□□□□ -0.21
UBE2D3-232ENST00000514755 JAG2Q9Y219 1238 aa13.75□□□□□ -0.21
UBE2D3-232ENST00000514755 PNMA6EA0A0J9YXQ4 647 aa13.74□□□□□ -0.21
UBE2D3-232ENST00000514755 H7C1D1 291 aa13.74□□□□□ -0.21
UBE2D3-232ENST00000514755 ZBTB7BO15156 539 aaPredicted RBP13.74□□□□□ -0.21
UBE2D3-232ENST00000514755 SRGAP3O43295 1099 aa13.74□□□□□ -0.21
UBE2D3-232ENST00000514755 GNAI2P04899 355 aa13.74□□□□□ -0.21
UBE2D3-232ENST00000514755 IL1R1P14778 569 aa13.74□□□□□ -0.21
UBE2D3-232ENST00000514755 RPS12P25398 132 aaKnown RBP13.74□□□□□ -0.21
UBE2D3-232ENST00000514755 APLP1P51693 650 aa13.74□□□□□ -0.21
UBE2D3-232ENST00000514755 MTX1Q13505 466 aa13.74□□□□□ -0.21
UBE2D3-232ENST00000514755 LCE2DQ5TA82 110 aaPredicted RBP13.74□□□□□ -0.21
UBE2D3-232ENST00000514755 STRIP1Q5VSL9 837 aa13.74□□□□□ -0.21
UBE2D3-232ENST00000514755 TTLL5Q6EMB2 1281 aa13.74□□□□□ -0.21
UBE2D3-232ENST00000514755 GPIHBP1Q8IV16 184 aa13.74□□□□□ -0.21
UBE2D3-232ENST00000514755 AGBL3Q8NEM8 1001 aa13.74□□□□□ -0.21
UBE2D3-232ENST00000514755 ZDHHC16Q969W1 377 aa13.74□□□□□ -0.21
UBE2D3-232ENST00000514755 FAM84BQ96KN1 310 aaPredicted RBP13.74□□□□□ -0.21
UBE2D3-232ENST00000514755 ZNF609O15014 1411 aa13.73□□□□□ -0.21
UBE2D3-232ENST00000514755 ASTN2O75129 1339 aaPredicted RBP13.73□□□□□ -0.21
UBE2D3-232ENST00000514755 FGFR2P21802 821 aa13.73□□□□□ -0.21
UBE2D3-232ENST00000514755 PPP4R3BQ5MIZ7 849 aa13.73□□□□□ -0.21
UBE2D3-232ENST00000514755 DLK2Q6UY11 383 aa13.73□□□□□ -0.21
UBE2D3-232ENST00000514755 CERS5Q8N5B7 392 aa13.73□□□□□ -0.21
UBE2D3-232ENST00000514755 ZC3H15Q8WU90 426 aaKnown RBP13.73□□□□□ -0.21
UBE2D3-232ENST00000514755 COPRSQ9NQ92 184 aa13.73□□□□□ -0.21
UBE2D3-232ENST00000514755 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.73□□□□□ -0.21
UBE2D3-232ENST00000514755 TRAF5O00463 557 aa13.72□□□□□ -0.21
UBE2D3-232ENST00000514755 GPR37O15354 613 aa13.72□□□□□ -0.21
UBE2D3-232ENST00000514755 ZNF280AP59817 542 aaPredicted RBP13.72□□□□□ -0.21
UBE2D3-232ENST00000514755 KIF4BQ2VIQ3 1234 aa13.72□□□□□ -0.21
UBE2D3-232ENST00000514755 ZNF804AQ7Z570 1209 aa13.72□□□□□ -0.21
UBE2D3-232ENST00000514755 FAM163AQ96GL9 167 aaPredicted RBP13.72□□□□□ -0.21
UBE2D3-232ENST00000514755 PGAP2Q9UHJ9 254 aa13.72□□□□□ -0.21
UBE2D3-232ENST00000514755 HDAC5Q9UQL6 1122 aa13.72□□□□□ -0.21
UBE2D3-232ENST00000514755 CIAO1O76071 339 aa13.71□□□□□ -0.21
UBE2D3-232ENST00000514755 USP17L8P0C7I0 530 aa13.71□□□□□ -0.21
UBE2D3-232ENST00000514755 HIBADHP31937 336 aaKnown RBP13.71□□□□□ -0.21
UBE2D3-232ENST00000514755 BCAMP50895 628 aa13.71□□□□□ -0.21
UBE2D3-232ENST00000514755 C20orf194Q5TEA3 1177 aa13.71□□□□□ -0.21
UBE2D3-232ENST00000514755 FBXO33Q7Z6M2 555 aa13.71□□□□□ -0.21
UBE2D3-232ENST00000514755 KIAA0825Q8IV33 1275 aa13.71□□□□□ -0.21
UBE2D3-232ENST00000514755 DNAJC5GQ8N7S2 189 aa13.71□□□□□ -0.21
UBE2D3-232ENST00000514755 TDRD7Q8NHU6 1098 aaKnown RBP13.71□□□□□ -0.21
UBE2D3-232ENST00000514755 GLIS2Q9BZE0 524 aaPredicted RBP13.71□□□□□ -0.21
UBE2D3-232ENST00000514755 IQSEC3Q9UPP2 1182 aaPredicted RBP13.71□□□□□ -0.21
UBE2D3-232ENST00000514755 MAP3K7O43318 606 aa13.7□□□□□ -0.22
UBE2D3-232ENST00000514755 IL15P40933 162 aaPredicted RBP13.7□□□□□ -0.22
UBE2D3-232ENST00000514755 PUM3Q15397 648 aaKnown RBP13.7□□□□□ -0.22
UBE2D3-232ENST00000514755 MYOZ2Q9NPC6 264 aa13.7□□□□□ -0.22
UBE2D3-232ENST00000514755 COG6Q9Y2V7 657 aa13.7□□□□□ -0.22
UBE2D3-232ENST00000514755 POLR2AP24928 1970 aaKnown RBP13.7□□□□□ -0.22
UBE2D3-232ENST00000514755 SASH1O94885 1247 aa13.69□□□□□ -0.22
UBE2D3-232ENST00000514755 PRKCSHP14314 528 aaPredicted RBP13.69□□□□□ -0.22
UBE2D3-232ENST00000514755 EMP3P54852 163 aa13.69□□□□□ -0.22
UBE2D3-232ENST00000514755 ADAM33Q9BZ11 813 aa13.69□□□□□ -0.22
UBE2D3-232ENST00000514755 SCAF8Q9UPN6 1271 aaKnown RBP13.69□□□□□ -0.22
UBE2D3-232ENST00000514755 PCDHAC2Q9Y5I4 1007 aa13.69□□□□□ -0.22
UBE2D3-232ENST00000514755 MYO3BQ8WXR4 1341 aa13.68□□□□□ -0.22
UBE2D3-232ENST00000514755 F8W031 263 aaPredicted RBP13.68□□□□□ -0.22
UBE2D3-232ENST00000514755 ATP8B2P98198 1209 aa13.68□□□□□ -0.22
UBE2D3-232ENST00000514755 TFCP2Q12800 502 aa13.68□□□□□ -0.22
UBE2D3-232ENST00000514755 SCARF1Q14162 830 aa13.68□□□□□ -0.22
UBE2D3-232ENST00000514755 MVPQ14764 893 aaKnown RBP13.68□□□□□ -0.22
UBE2D3-232ENST00000514755 GRIK5Q16478 980 aa13.68□□□□□ -0.22
UBE2D3-232ENST00000514755 ATP2B3Q16720 1220 aa13.68□□□□□ -0.22
UBE2D3-232ENST00000514755 NBPF9Q3BBW0 867 aa13.68□□□□□ -0.22
UBE2D3-232ENST00000514755 USP48Q86UV5 1035 aa13.68□□□□□ -0.22
UBE2D3-232ENST00000514755 LPIN2Q92539 896 aa13.68□□□□□ -0.22
UBE2D3-232ENST00000514755 MARVELD3Q96A59 401 aa13.68□□□□□ -0.22
UBE2D3-232ENST00000514755 GGA3Q9NZ52 723 aa13.68□□□□□ -0.22
UBE2D3-232ENST00000514755 CEP126Q9P2H0 1117 aa13.68□□□□□ -0.22
UBE2D3-232ENST00000514755 CEP350Q5VT06 3117 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms