RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 ALDH1L2Q3SY69 923 aa15.33■□□□□ 0.04
SNHG4-208ENST00000514110 CAVIN4Q5BKX8 364 aa15.33■□□□□ 0.04
SNHG4-208ENST00000514110 IFNL1Q8IU54 200 aa15.33■□□□□ 0.04
SNHG4-208ENST00000514110 HPS5Q9UPZ3 1129 aa15.33■□□□□ 0.04
SNHG4-208ENST00000514110 LAMB1P07942 1786 aa15.33■□□□□ 0.04
SNHG4-208ENST00000514110 UNCXA6NJT0 531 aa15.32■□□□□ 0.04
SNHG4-208ENST00000514110 TCP10L2B9ZVM9 353 aa15.32■□□□□ 0.04
SNHG4-208ENST00000514110 IGF2BP3O00425 579 aaKnown RBP eCLIP15.32■□□□□ 0.04
SNHG4-208ENST00000514110 FKTNO75072 461 aa15.32■□□□□ 0.04
SNHG4-208ENST00000514110 INHBEP58166 350 aa15.32■□□□□ 0.04
SNHG4-208ENST00000514110 TNFAIP1Q13829 316 aa15.32■□□□□ 0.04
SNHG4-208ENST00000514110 PKN2Q16513 984 aaKnown RBP15.32■□□□□ 0.04
SNHG4-208ENST00000514110 TRMT2AQ8IZ69 625 aaKnown RBP15.32■□□□□ 0.04
SNHG4-208ENST00000514110 TEPSINQ96N21 525 aa15.32■□□□□ 0.04
SNHG4-208ENST00000514110 SMC4Q9NTJ3 1288 aa15.32■□□□□ 0.04
SNHG4-208ENST00000514110 OTOFQ9HC10 1997 aa15.32■□□□□ 0.04
SNHG4-208ENST00000514110 FRAT2O75474 233 aaPredicted RBP15.31■□□□□ 0.04
SNHG4-208ENST00000514110 ALDH1A1P00352 501 aa15.31■□□□□ 0.04
SNHG4-208ENST00000514110 FGFR2P21802 821 aa15.31■□□□□ 0.04
SNHG4-208ENST00000514110 ANKRD13AQ8IZ07 590 aa15.31■□□□□ 0.04
SNHG4-208ENST00000514110 TBC1D22AQ8WUA7 517 aa15.31■□□□□ 0.04
SNHG4-208ENST00000514110 TMEM39BQ9GZU3 492 aa15.31■□□□□ 0.04
SNHG4-208ENST00000514110 EYA2O00167 538 aa15.3■□□□□ 0.04
SNHG4-208ENST00000514110 HDLBPQ00341 1268 aaKnown RBP15.3■□□□□ 0.04
SNHG4-208ENST00000514110 PUM3Q15397 648 aaKnown RBP15.3■□□□□ 0.04
SNHG4-208ENST00000514110 ELP3Q9H9T3 547 aa15.3■□□□□ 0.04
SNHG4-208ENST00000514110 KIF16BQ96L93 1317 aa15.29■□□□□ 0.04
SNHG4-208ENST00000514110 IFIT1P09914 478 aaKnown RBP15.29■□□□□ 0.04
SNHG4-208ENST00000514110 CACNB3P54284 484 aa15.29■□□□□ 0.04
SNHG4-208ENST00000514110 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.29■□□□□ 0.04
SNHG4-208ENST00000514110 ATG9AQ7Z3C6 839 aa15.29■□□□□ 0.04
SNHG4-208ENST00000514110 TEKT1Q969V4 418 aa15.29■□□□□ 0.04
SNHG4-208ENST00000514110 TNNI2P48788 182 aa15.28■□□□□ 0.04
SNHG4-208ENST00000514110 FBXO46Q6PJ61 603 aaPredicted RBP15.28■□□□□ 0.04
SNHG4-208ENST00000514110 CNKSR2Q8WXI2 1034 aa15.28■□□□□ 0.04
SNHG4-208ENST00000514110 OPTNQ96CV9 577 aa15.28■□□□□ 0.04
SNHG4-208ENST00000514110 PTPN18Q99952 460 aa15.28■□□□□ 0.04
SNHG4-208ENST00000514110 NOB1Q9ULX3 412 aaKnown RBP15.28■□□□□ 0.04
SNHG4-208ENST00000514110 TESPA1A2RU30 521 aaPredicted RBP15.27■□□□□ 0.04
SNHG4-208ENST00000514110 UBTFL1P0CB47 393 aaPredicted RBP15.27■□□□□ 0.04
SNHG4-208ENST00000514110 SLC5A1P13866 664 aa15.27■□□□□ 0.04
SNHG4-208ENST00000514110 CRHR2Q13324 411 aa15.27■□□□□ 0.04
SNHG4-208ENST00000514110 APOBEC3HQ6NTF7 200 aaKnown RBP15.27■□□□□ 0.04
SNHG4-208ENST00000514110 LPIN2Q92539 896 aa15.27■□□□□ 0.04
SNHG4-208ENST00000514110 MS4A4AQ96JQ5 239 aa15.27■□□□□ 0.04
SNHG4-208ENST00000514110 ZDHHC15Q96MV8 337 aa15.27■□□□□ 0.04
SNHG4-208ENST00000514110 MRIQ9BWK5 157 aa15.27■□□□□ 0.04
SNHG4-208ENST00000514110 SIL1Q9H173 461 aa15.27■□□□□ 0.04
SNHG4-208ENST00000514110 CT47B1P0C2W7 299 aaPredicted RBP15.26■□□□□ 0.03
SNHG4-208ENST00000514110 MAP3K9P80192 1104 aa15.26■□□□□ 0.03
SNHG4-208ENST00000514110 VGLL4Q14135 290 aa15.26■□□□□ 0.03
SNHG4-208ENST00000514110 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.26■□□□□ 0.03
SNHG4-208ENST00000514110 SUGT1Q9Y2Z0 365 aa15.26■□□□□ 0.03
SNHG4-208ENST00000514110 HTTP42858 3142 aa15.26■□□□□ 0.03
SNHG4-208ENST00000514110 MAST3O60307 1309 aa15.25■□□□□ 0.03
SNHG4-208ENST00000514110 OTUD7BQ6GQQ9 843 aa15.25■□□□□ 0.03
SNHG4-208ENST00000514110 HHIPL2Q6UWX4 724 aa15.25■□□□□ 0.03
SNHG4-208ENST00000514110 TRIM17Q9Y577 477 aa15.25■□□□□ 0.03
SNHG4-208ENST00000514110 LRRFIP2Q9Y608 721 aaKnown RBP15.25■□□□□ 0.03
SNHG4-208ENST00000514110 MYH13Q9UKX3 1938 aa15.25■□□□□ 0.03
SNHG4-208ENST00000514110 OTOP1Q7RTM1 612 aa15.24■□□□□ 0.03
SNHG4-208ENST00000514110 FAM83AQ86UY5 434 aa15.24■□□□□ 0.03
SNHG4-208ENST00000514110 WDR66Q8TBY9 1149 aa15.24■□□□□ 0.03
SNHG4-208ENST00000514110 BRI3BPQ8WY22 251 aa15.24■□□□□ 0.03
SNHG4-208ENST00000514110 API5Q9BZZ5 524 aaKnown RBP15.24■□□□□ 0.03
SNHG4-208ENST00000514110 TMOD2Q9NZR1 351 aa15.24■□□□□ 0.03
SNHG4-208ENST00000514110 PA2G4Q9UQ80 394 aaKnown RBP15.24■□□□□ 0.03
SNHG4-208ENST00000514110 CSADQ9Y600 493 aa15.24■□□□□ 0.03
SNHG4-208ENST00000514110 CIAO1O76071 339 aa15.23■□□□□ 0.03
SNHG4-208ENST00000514110 RARSP54136 660 aaKnown RBP15.23■□□□□ 0.03
SNHG4-208ENST00000514110 CAP1Q01518 475 aa15.23■□□□□ 0.03
SNHG4-208ENST00000514110 ATP2B3Q16720 1220 aa15.23■□□□□ 0.03
SNHG4-208ENST00000514110 FKBP1CQ5VVH2 108 aa15.23■□□□□ 0.03
SNHG4-208ENST00000514110 CD99L2Q8TCZ2 262 aa15.23■□□□□ 0.03
SNHG4-208ENST00000514110 OTUD5Q96G74 571 aa15.23■□□□□ 0.03
SNHG4-208ENST00000514110 MEIS3Q99687 375 aa15.23■□□□□ 0.03
SNHG4-208ENST00000514110 CEP126Q9P2H0 1117 aa15.23■□□□□ 0.03
SNHG4-208ENST00000514110 FBXO3Q9UK99 471 aa15.23■□□□□ 0.03
SNHG4-208ENST00000514110 CCL15-CCL14A0A0B4J2E2 113 aa15.22■□□□□ 0.03
SNHG4-208ENST00000514110 PRDX5P30044 214 aa15.22■□□□□ 0.03
SNHG4-208ENST00000514110 GTF2A2P52657 109 aa15.22■□□□□ 0.03
SNHG4-208ENST00000514110 DIXDC1Q155Q3 683 aa15.22■□□□□ 0.03
SNHG4-208ENST00000514110 CCL15Q16663 113 aa15.22■□□□□ 0.03
SNHG4-208ENST00000514110 ZKSCAN4Q969J2 545 aaPredicted RBP15.22■□□□□ 0.03
SNHG4-208ENST00000514110 ERO1AQ96HE7 468 aa15.22■□□□□ 0.03
SNHG4-208ENST00000514110 WRNIP1Q96S55 665 aa15.22■□□□□ 0.03
SNHG4-208ENST00000514110 DAGLAQ9Y4D2 1042 aa15.22■□□□□ 0.03
SNHG4-208ENST00000514110 SNCAIPQ9Y6H5 919 aa15.22■□□□□ 0.03
SNHG4-208ENST00000514110 SPDYE5A6NIY4 337 aa15.21■□□□□ 0.03
SNHG4-208ENST00000514110 CCER2I3L3R5 266 aa15.21■□□□□ 0.03
SNHG4-208ENST00000514110 IL15P40933 162 aaPredicted RBP15.21■□□□□ 0.03
SNHG4-208ENST00000514110 PHKA1P46020 1223 aa15.21■□□□□ 0.03
SNHG4-208ENST00000514110 SP3Q02447 781 aa15.21■□□□□ 0.03
SNHG4-208ENST00000514110 FAM43AQ8N2R8 423 aa15.21■□□□□ 0.03
SNHG4-208ENST00000514110 RPAP1Q9BWH6 1393 aaPredicted RBP15.21■□□□□ 0.02
SNHG4-208ENST00000514110 ADORA1P30542 326 aa15.2■□□□□ 0.02
SNHG4-208ENST00000514110 CDC42EP5Q6NZY7 148 aa15.2■□□□□ 0.02
SNHG4-208ENST00000514110 MIGA2Q7L4E1 593 aa15.2■□□□□ 0.02
SNHG4-208ENST00000514110 ERO1BQ86YB8 467 aa15.2■□□□□ 0.02
SNHG4-208ENST00000514110 COPRSQ9NQ92 184 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms