RNA–Protein interactions for RNA: ENST00000514027.5

SDHA-216, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,209 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-216ENST00000514027 CCDC73Q6ZRK6 1079 aa14.64□□□□□ -0.07
SDHA-216ENST00000514027 NCOA7Q8NI08 942 aa14.64□□□□□ -0.07
SDHA-216ENST00000514027 SLC4A9Q96Q91 983 aa14.64□□□□□ -0.07
SDHA-216ENST00000514027 GOLPH3LQ9H4A5 285 aa14.64□□□□□ -0.07
SDHA-216ENST00000514027 CPLX1O14810 134 aa14.64□□□□□ -0.07
SDHA-216ENST00000514027 CYP19A1P11511 503 aaPredicted RBP14.64□□□□□ -0.07
SDHA-216ENST00000514027 MB21D2Q8IYB1 491 aaPredicted RBP14.64□□□□□ -0.07
SDHA-216ENST00000514027 TRIM5Q9C035 493 aa14.64□□□□□ -0.07
SDHA-216ENST00000514027 KCNF1Q9H3M0 494 aa14.64□□□□□ -0.07
SDHA-216ENST00000514027 LRP6O75581 1613 aa14.63□□□□□ -0.07
SDHA-216ENST00000514027 FDPSP14324 419 aaKnown RBP14.63□□□□□ -0.07
SDHA-216ENST00000514027 ILDR1Q86SU0 546 aaPredicted RBP14.63□□□□□ -0.07
SDHA-216ENST00000514027 RCOR1Q9UKL0 485 aa14.63□□□□□ -0.07
SDHA-216ENST00000514027 MYH3P11055 1940 aa14.63□□□□□ -0.07
SDHA-216ENST00000514027 NHSL1Q5SYE7 1610 aa14.63□□□□□ -0.07
SDHA-216ENST00000514027 CAPN2P17655 700 aa14.62□□□□□ -0.07
SDHA-216ENST00000514027 PTGS1P23219 599 aa14.62□□□□□ -0.07
SDHA-216ENST00000514027 ANTXR2P58335 489 aa14.62□□□□□ -0.07
SDHA-216ENST00000514027 DZIP3Q86Y13 1208 aaKnown RBP14.62□□□□□ -0.07
SDHA-216ENST00000514027 CERS3Q8IU89 383 aa14.62□□□□□ -0.07
SDHA-216ENST00000514027 HELBQ8NG08 1087 aaPredicted RBP14.62□□□□□ -0.07
SDHA-216ENST00000514027 CHMP4CQ96CF2 233 aa14.62□□□□□ -0.07
SDHA-216ENST00000514027 C8orf76Q96K31 380 aa14.62□□□□□ -0.07
SDHA-216ENST00000514027 SPTLC3Q9NUV7 552 aa14.62□□□□□ -0.07
SDHA-216ENST00000514027 PYCARDQ9ULZ3 195 aa14.62□□□□□ -0.07
SDHA-216ENST00000514027 ABCC12Q96J65 1359 aa14.62□□□□□ -0.07
SDHA-216ENST00000514027 KINO60870 393 aaKnown RBP14.62□□□□□ -0.07
SDHA-216ENST00000514027 POLR3DP05423 398 aaPredicted RBP14.62□□□□□ -0.07
SDHA-216ENST00000514027 PHKA1P46020 1223 aa14.62□□□□□ -0.07
SDHA-216ENST00000514027 TRDNQ13061 729 aa14.62□□□□□ -0.07
SDHA-216ENST00000514027 ZSCAN25Q6NSZ9 544 aa14.62□□□□□ -0.07
SDHA-216ENST00000514027 FSIP1Q8NA03 581 aa14.62□□□□□ -0.07
SDHA-216ENST00000514027 PIH1D3Q9NQM4 214 aaKnown RBP14.62□□□□□ -0.07
SDHA-216ENST00000514027 ORC3Q9UBD5 711 aaPredicted RBP14.62□□□□□ -0.07
SDHA-216ENST00000514027 BCL9O00512 1426 aa14.62□□□□□ -0.07
SDHA-216ENST00000514027 ANKRD36CQ5JPF3 1778 aa14.62□□□□□ -0.07
SDHA-216ENST00000514027 DHX16O60231 1041 aaKnown RBP14.61□□□□□ -0.07
SDHA-216ENST00000514027 TPM3P06753 285 aa14.61□□□□□ -0.07
SDHA-216ENST00000514027 ADD2P35612 726 aa14.61□□□□□ -0.07
SDHA-216ENST00000514027 FBXW7Q969H0 707 aa14.61□□□□□ -0.07
SDHA-216ENST00000514027 GJB4Q9NTQ9 266 aa14.61□□□□□ -0.07
SDHA-216ENST00000514027 DENND2AQ9ULE3 1009 aa14.61□□□□□ -0.07
SDHA-216ENST00000514027 A0A087WWV3 80 aa14.61□□□□□ -0.07
SDHA-216ENST00000514027 PDE8AO60658 829 aa14.61□□□□□ -0.07
SDHA-216ENST00000514027 PDE8BO95263 885 aa14.61□□□□□ -0.07
SDHA-216ENST00000514027 TTF1Q15361 905 aaPredicted RBP14.61□□□□□ -0.07
SDHA-216ENST00000514027 CCDC102BQ68D86 513 aa14.61□□□□□ -0.07
SDHA-216ENST00000514027 C11orf57Q6ZUT1 292 aaPredicted RBP14.61□□□□□ -0.07
SDHA-216ENST00000514027 VGLL2Q8N8G2 317 aa14.61□□□□□ -0.07
SDHA-216ENST00000514027 TDRD7Q8NHU6 1098 aaKnown RBP14.61□□□□□ -0.07
SDHA-216ENST00000514027 HPS5Q9UPZ3 1129 aa14.61□□□□□ -0.07
SDHA-216ENST00000514027 AKAP11Q9UKA4 1901 aa14.6□□□□□ -0.07
SDHA-216ENST00000514027 MYO5AQ9Y4I1 1855 aaKnown RBP14.6□□□□□ -0.07
SDHA-216ENST00000514027 UBN2Q6ZU65 1347 aa14.6□□□□□ -0.07
SDHA-216ENST00000514027 ZNF532Q9HCE3 1301 aa14.6□□□□□ -0.07
SDHA-216ENST00000514027 GOLGA6L19H0YKK7 550 aa14.6□□□□□ -0.07
SDHA-216ENST00000514027 CTIFO43310 598 aaKnown RBP14.6□□□□□ -0.07
SDHA-216ENST00000514027 EVCP57679 992 aa14.6□□□□□ -0.07
SDHA-216ENST00000514027 SF3A1Q15459 793 aaKnown RBP14.6□□□□□ -0.07
SDHA-216ENST00000514027 ATL3Q6DD88 541 aa14.6□□□□□ -0.07
SDHA-216ENST00000514027 FBXL16Q8N461 479 aa14.6□□□□□ -0.07
SDHA-216ENST00000514027 ERCC4Q92889 916 aaPredicted RBP14.6□□□□□ -0.07
SDHA-216ENST00000514027 TRIM34Q9BYJ4 488 aa14.6□□□□□ -0.07
SDHA-216ENST00000514027 RNF216Q9NWF9 866 aaPredicted RBP14.6□□□□□ -0.07
SDHA-216ENST00000514027 NUP98P52948 1817 aa14.6□□□□□ -0.07
SDHA-216ENST00000514027 EXOC5O00471 708 aa14.6□□□□□ -0.07
SDHA-216ENST00000514027 FAM160A1Q05DH4 1040 aa14.6□□□□□ -0.07
SDHA-216ENST00000514027 SNW1Q13573 536 aaKnown RBP14.6□□□□□ -0.07
SDHA-216ENST00000514027 STK38Q15208 465 aa14.6□□□□□ -0.07
SDHA-216ENST00000514027 STX1AQ16623 288 aa14.6□□□□□ -0.07
SDHA-216ENST00000514027 CCDC186Q7Z3E2 898 aa14.6□□□□□ -0.07
SDHA-216ENST00000514027 TBC1D10CQ8IV04 446 aa14.6□□□□□ -0.07
SDHA-216ENST00000514027 TSPYL1Q9H0U9 437 aa14.6□□□□□ -0.07
SDHA-216ENST00000514027 WWC3Q9ULE0 1092 aa14.6□□□□□ -0.07
SDHA-216ENST00000514027 CTAGE5O15320 804 aa14.59□□□□□ -0.07
SDHA-216ENST00000514027 RXRAP19793 462 aa14.59□□□□□ -0.07
SDHA-216ENST00000514027 ZNF75DP51815 510 aa14.59□□□□□ -0.07
SDHA-216ENST00000514027 NBPF3Q9H094 633 aa14.59□□□□□ -0.07
SDHA-216ENST00000514027 NRBP1Q9UHY1 535 aa14.59□□□□□ -0.07
SDHA-216ENST00000514027 PCDHA7Q9UN72 937 aa14.59□□□□□ -0.07
SDHA-216ENST00000514027 CLIC4Q9Y696 253 aa14.59□□□□□ -0.07
SDHA-216ENST00000514027 A0A1B0GVL5 298 aa14.58□□□□□ -0.07
SDHA-216ENST00000514027 PDE6AP16499 860 aa14.58□□□□□ -0.07
SDHA-216ENST00000514027 PUM3Q15397 648 aaKnown RBP14.58□□□□□ -0.07
SDHA-216ENST00000514027 KIAA1524Q8TCG1 905 aa14.58□□□□□ -0.07
SDHA-216ENST00000514027 MRPS27Q92552 414 aaKnown RBP14.58□□□□□ -0.07
SDHA-216ENST00000514027 AIDAQ96BJ3 306 aa14.58□□□□□ -0.07
SDHA-216ENST00000514027 CALCOCO1Q9P1Z2 691 aa14.58□□□□□ -0.07
SDHA-216ENST00000514027 DISP2A7MBM2 1401 aa14.58□□□□□ -0.08
SDHA-216ENST00000514027 B4E1Z4 1266 aa14.58□□□□□ -0.08
SDHA-216ENST00000514027 SNAP23O00161 211 aa14.58□□□□□ -0.08
SDHA-216ENST00000514027 RIOK3O14730 519 aaKnown RBP14.58□□□□□ -0.08
SDHA-216ENST00000514027 TERF2Q15554 542 aa14.58□□□□□ -0.08
SDHA-216ENST00000514027 CYB5R4Q7L1T6 521 aa14.58□□□□□ -0.08
SDHA-216ENST00000514027 PLA2G4DQ86XP0 818 aa14.58□□□□□ -0.08
SDHA-216ENST00000514027 CCDC144CPQ8IYA2 1237 aa14.58□□□□□ -0.08
SDHA-216ENST00000514027 CLIP2Q9UDT6 1046 aa14.58□□□□□ -0.08
SDHA-216ENST00000514027 BECN2A8MW95 431 aa14.57□□□□□ -0.08
SDHA-216ENST00000514027 METAP2P50579 478 aaKnown RBP eCLIP14.57□□□□□ -0.083e-6■■■■□ 25.7
SDHA-216ENST00000514027 LRMPQ12912 555 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 148.2 ms