RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 GYG1P46976 350 aa9.93□□□□□ -0.82
RNF4-220ENST00000513578 ZNF827Q17R98 1081 aa9.93□□□□□ -0.82
RNF4-220ENST00000513578 MAGEB6Q8N7X4 407 aa9.93□□□□□ -0.82
RNF4-220ENST00000513578 RPGRQ92834 1020 aaKnown RBP9.93□□□□□ -0.82
RNF4-220ENST00000513578 BRIP1Q9BX63 1249 aa9.93□□□□□ -0.82
RNF4-220ENST00000513578 PODXL2Q9NZ53 605 aa9.93□□□□□ -0.82
RNF4-220ENST00000513578 TPCN1Q9ULQ1 816 aa9.93□□□□□ -0.82
RNF4-220ENST00000513578 TCHHQ07283 1943 aa9.93□□□□□ -0.82
RNF4-220ENST00000513578 ZNF213O14771 459 aa9.92□□□□□ -0.82
RNF4-220ENST00000513578 ATP2B4P23634 1241 aa9.92□□□□□ -0.82
RNF4-220ENST00000513578 ST3GAL1Q11201 340 aa9.92□□□□□ -0.82
RNF4-220ENST00000513578 Q6ZUG5 572 aa9.92□□□□□ -0.82
RNF4-220ENST00000513578 COL23A1Q86Y22 540 aaPredicted RBP9.92□□□□□ -0.82
RNF4-220ENST00000513578 MB21D2Q8IYB1 491 aaPredicted RBP9.92□□□□□ -0.82
RNF4-220ENST00000513578 NCOA7Q8NI08 942 aa9.92□□□□□ -0.82
RNF4-220ENST00000513578 AIDAQ96BJ3 306 aa9.92□□□□□ -0.82
RNF4-220ENST00000513578 ZNF274Q96GC6 653 aaPredicted RBP9.92□□□□□ -0.82
RNF4-220ENST00000513578 LLPHQ9BRT6 129 aaKnown RBP9.92□□□□□ -0.82
RNF4-220ENST00000513578 TFCP2L1Q9NZI6 479 aa9.92□□□□□ -0.82
RNF4-220ENST00000513578 SMC3Q9UQE7 1217 aa9.92□□□□□ -0.82
RNF4-220ENST00000513578 LAMB1P07942 1786 aa9.91□□□□□ -0.82
RNF4-220ENST00000513578 PFKFB2O60825 505 aa9.91□□□□□ -0.82
RNF4-220ENST00000513578 MCM5P33992 734 aa9.91□□□□□ -0.82
RNF4-220ENST00000513578 PKP1Q13835 747 aa9.91□□□□□ -0.82
RNF4-220ENST00000513578 COL9A3Q14050 684 aaPredicted RBP9.91□□□□□ -0.82
RNF4-220ENST00000513578 TTLL5Q6EMB2 1281 aa9.91□□□□□ -0.82
RNF4-220ENST00000513578 GIMAP6Q6P9H5 292 aa9.91□□□□□ -0.82
RNF4-220ENST00000513578 NOL8Q76FK4 1167 aaKnown RBP9.91□□□□□ -0.82
RNF4-220ENST00000513578 VPS37DQ86XT2 251 aa9.91□□□□□ -0.82
RNF4-220ENST00000513578 IFNL3Q8IZI9 196 aa9.91□□□□□ -0.82
RNF4-220ENST00000513578 RGS22Q8NE09 1264 aa9.91□□□□□ -0.82
RNF4-220ENST00000513578 TDRD7Q8NHU6 1098 aaKnown RBP9.91□□□□□ -0.82
RNF4-220ENST00000513578 GTF3C6Q969F1 213 aa9.91□□□□□ -0.82
RNF4-220ENST00000513578 MTA3Q9BTC8 594 aa9.91□□□□□ -0.82
RNF4-220ENST00000513578 LRP2BPQ9P2M1 347 aa9.91□□□□□ -0.82
RNF4-220ENST00000513578 COL11A2P13942 1736 aaPredicted RBP9.9□□□□□ -0.82
RNF4-220ENST00000513578 MYH15Q9Y2K3 1946 aa9.9□□□□□ -0.82
RNF4-220ENST00000513578 GSG1L2A8MUP6 293 aa9.9□□□□□ -0.82
RNF4-220ENST00000513578 TRAK2O60296 914 aa9.9□□□□□ -0.82
RNF4-220ENST00000513578 MBD4O95243 580 aa9.9□□□□□ -0.82
RNF4-220ENST00000513578 PDCP20941 246 aa9.9□□□□□ -0.82
RNF4-220ENST00000513578 GSE1Q14687 1217 aa9.9□□□□□ -0.82
RNF4-220ENST00000513578 SPTY2D1Q68D10 685 aaPredicted RBP9.9□□□□□ -0.82
RNF4-220ENST00000513578 CCDC83Q8IWF9 413 aa9.9□□□□□ -0.82
RNF4-220ENST00000513578 SP8Q8IXZ3 490 aa9.9□□□□□ -0.82
RNF4-220ENST00000513578 CCDC24Q8N4L8 307 aa9.9□□□□□ -0.82
RNF4-220ENST00000513578 SMARCC2Q8TAQ2 1214 aa9.9□□□□□ -0.82
RNF4-220ENST00000513578 WDR66Q8TBY9 1149 aa9.9□□□□□ -0.82
RNF4-220ENST00000513578 NACAP1Q9BZK3 213 aa9.9□□□□□ -0.82
RNF4-220ENST00000513578 ANAPC4Q9UJX5 808 aa9.9□□□□□ -0.82
RNF4-220ENST00000513578 DLEC1Q9Y238 1755 aa9.9□□□□□ -0.82
RNF4-220ENST00000513578 EP400Q96L91 3159 aa9.89□□□□□ -0.83
RNF4-220ENST00000513578 A0A0G2JLW4 131 aa9.89□□□□□ -0.83
RNF4-220ENST00000513578 WTIPA6NIX2 430 aaPredicted RBP9.89□□□□□ -0.83
RNF4-220ENST00000513578 STX6O43752 255 aa9.89□□□□□ -0.83
RNF4-220ENST00000513578 ZSCAN22P10073 491 aaPredicted RBP9.89□□□□□ -0.83
RNF4-220ENST00000513578 SYT1P21579 422 aa9.89□□□□□ -0.83
RNF4-220ENST00000513578 CYP7A1P22680 504 aa9.89□□□□□ -0.83
RNF4-220ENST00000513578 GJB2P29033 226 aa9.89□□□□□ -0.83
RNF4-220ENST00000513578 PDE6BP35913 854 aa9.89□□□□□ -0.83
RNF4-220ENST00000513578 NT5C2P49902 561 aa9.89□□□□□ -0.83
RNF4-220ENST00000513578 ZNF804AQ7Z570 1209 aa9.89□□□□□ -0.83
RNF4-220ENST00000513578 NSUN4Q96CB9 384 aaKnown RBP9.89□□□□□ -0.83
RNF4-220ENST00000513578 CAMKK2Q96RR4 588 aa9.89□□□□□ -0.83
RNF4-220ENST00000513578 RIOK1Q9BRS2 568 aaKnown RBP9.89□□□□□ -0.83
RNF4-220ENST00000513578 NBPF3Q9H094 633 aa9.89□□□□□ -0.83
RNF4-220ENST00000513578 CNNM2Q9H8M5 875 aa9.89□□□□□ -0.83
RNF4-220ENST00000513578 ARMT1Q9H993 441 aa9.89□□□□□ -0.83
RNF4-220ENST00000513578 EPB41L4AQ9HCS5 686 aaPredicted RBP9.89□□□□□ -0.83
RNF4-220ENST00000513578 RAI14Q9P0K7 980 aa9.89□□□□□ -0.83
RNF4-220ENST00000513578 BAZ2AQ9UIF9 1905 aaKnown RBP9.89□□□□□ -0.83
RNF4-220ENST00000513578 MYH2Q9UKX2 1941 aa9.89□□□□□ -0.83
RNF4-220ENST00000513578 CDK5RAP2Q96SN8 1893 aa9.89□□□□□ -0.83
RNF4-220ENST00000513578 MAGEB6P1A0A0J9YX57 407 aa9.88□□□□□ -0.83
RNF4-220ENST00000513578 SRGNP10124 158 aa9.88□□□□□ -0.83
RNF4-220ENST00000513578 PCP11498 1178 aaKnown RBP9.88□□□□□ -0.83
RNF4-220ENST00000513578 IL1R1P14778 569 aa9.88□□□□□ -0.83
RNF4-220ENST00000513578 NPR1P16066 1061 aa9.88□□□□□ -0.83
RNF4-220ENST00000513578 KLRK1P26718 216 aa9.88□□□□□ -0.83
RNF4-220ENST00000513578 ALDH1B1P30837 517 aa9.88□□□□□ -0.83
RNF4-220ENST00000513578 GPSM2P81274 684 aa9.88□□□□□ -0.83
RNF4-220ENST00000513578 TRDNQ13061 729 aa9.88□□□□□ -0.83
RNF4-220ENST00000513578 NAA16Q6N069 864 aaPredicted RBP9.88□□□□□ -0.83
RNF4-220ENST00000513578 RALYLQ86SE5 291 aaKnown RBP9.88□□□□□ -0.83
RNF4-220ENST00000513578 LCORLQ8N3X6 602 aa9.88□□□□□ -0.83
RNF4-220ENST00000513578 NECAB1Q8N987 351 aa9.88□□□□□ -0.83
RNF4-220ENST00000513578 TMEM87AQ8NBN3 555 aa9.88□□□□□ -0.83
RNF4-220ENST00000513578 BRF1Q92994 677 aa9.88□□□□□ -0.83
RNF4-220ENST00000513578 TMEM87BQ96K49 555 aa9.88□□□□□ -0.83
RNF4-220ENST00000513578 TCEANC2Q96MN5 208 aa9.88□□□□□ -0.83
RNF4-220ENST00000513578 NAPBQ9H115 298 aa9.88□□□□□ -0.83
RNF4-220ENST00000513578 LMBRD1Q9NUN5 540 aa9.88□□□□□ -0.83
RNF4-220ENST00000513578 ANKIB1Q9P2G1 1089 aa9.88□□□□□ -0.83
RNF4-220ENST00000513578 ABCF2Q9UG63 623 aa9.88□□□□□ -0.83
RNF4-220ENST00000513578 MTMR6Q9Y217 621 aa9.88□□□□□ -0.83
RNF4-220ENST00000513578 ATP6V0A2Q9Y487 856 aa9.88□□□□□ -0.83
RNF4-220ENST00000513578 ATP6V1DQ9Y5K8 247 aa9.88□□□□□ -0.83
RNF4-220ENST00000513578 PARP3Q9Y6F1 533 aa9.88□□□□□ -0.83
RNF4-220ENST00000513578 FOCADQ5VW36 1801 aa9.88□□□□□ -0.83
RNF4-220ENST00000513578 CEP350Q5VT06 3117 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms