RNA–Protein interactions for RNA: ENST00000511944.5

NR1I3-230, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-230ENST00000511944 REC8O95072 547 aa11.06□□□□□ -0.64
NR1I3-230ENST00000511944 PDE8BO95263 885 aa11.06□□□□□ -0.64
NR1I3-230ENST00000511944 ST5P78524 1137 aa11.06□□□□□ -0.64
NR1I3-230ENST00000511944 ZNF827Q17R98 1081 aa11.06□□□□□ -0.64
NR1I3-230ENST00000511944 CRY2Q49AN0 593 aa11.06□□□□□ -0.64
NR1I3-230ENST00000511944 NUTM1Q86Y26 1132 aa11.06□□□□□ -0.64
NR1I3-230ENST00000511944 VGLL2Q8N8G2 317 aa11.06□□□□□ -0.64
NR1I3-230ENST00000511944 EVI5LQ96CN4 794 aa11.06□□□□□ -0.64
NR1I3-230ENST00000511944 MPHOSPH8Q99549 860 aa11.06□□□□□ -0.64
NR1I3-230ENST00000511944 CNNM1Q9NRU3 951 aa11.06□□□□□ -0.64
NR1I3-230ENST00000511944 BSDC1Q9NW68 430 aaPredicted RBP11.06□□□□□ -0.64
NR1I3-230ENST00000511944 DBNLQ9UJU6 430 aaKnown RBP11.06□□□□□ -0.64
NR1I3-230ENST00000511944 EP400Q96L91 3159 aa11.06□□□□□ -0.64
NR1I3-230ENST00000511944 ARAP2Q8WZ64 1704 aa11.06□□□□□ -0.64
NR1I3-230ENST00000511944 KLRG2A4D1S0 409 aaPredicted RBP11.05□□□□□ -0.64
NR1I3-230ENST00000511944 ANP32AP39687 249 aaKnown RBP11.05□□□□□ -0.64
NR1I3-230ENST00000511944 PPP4CP60510 307 aa11.05□□□□□ -0.64
NR1I3-230ENST00000511944 PUM3Q15397 648 aaKnown RBP11.05□□□□□ -0.64
NR1I3-230ENST00000511944 SLC15A2Q16348 729 aa11.05□□□□□ -0.64
NR1I3-230ENST00000511944 LRRC24Q50LG9 513 aa11.05□□□□□ -0.64
NR1I3-230ENST00000511944 METTL24Q5JXM2 366 aa11.05□□□□□ -0.64
NR1I3-230ENST00000511944 TMC4Q7Z404 712 aa11.05□□□□□ -0.64
NR1I3-230ENST00000511944 ANKRD18AQ8IVF6 992 aa11.05□□□□□ -0.64
NR1I3-230ENST00000511944 RDH13Q8NBN7 331 aa11.05□□□□□ -0.64
NR1I3-230ENST00000511944 STK32BQ9NY57 414 aa11.05□□□□□ -0.64
NR1I3-230ENST00000511944 PNPLA7Q6ZV29 1317 aa11.05□□□□□ -0.64
NR1I3-230ENST00000511944 RAD50Q92878 1312 aa11.05□□□□□ -0.64
NR1I3-230ENST00000511944 A0A1B0GUL7 405 aa11.04□□□□□ -0.64
NR1I3-230ENST00000511944 POLRMTO00411 1230 aaKnown RBP11.04□□□□□ -0.64
NR1I3-230ENST00000511944 IGSF3O75054 1194 aa11.04□□□□□ -0.64
NR1I3-230ENST00000511944 SERPINB2P05120 415 aa11.04□□□□□ -0.64
NR1I3-230ENST00000511944 FGFR2P21802 821 aa11.04□□□□□ -0.64
NR1I3-230ENST00000511944 RBM25P49756 843 aaKnown RBP11.04□□□□□ -0.64
NR1I3-230ENST00000511944 APLP1P51693 650 aa11.04□□□□□ -0.64
NR1I3-230ENST00000511944 ATP2B3Q16720 1220 aa11.04□□□□□ -0.64
NR1I3-230ENST00000511944 LRRFIP1Q32MZ4 808 aaKnown RBP11.04□□□□□ -0.64
NR1I3-230ENST00000511944 PRR5LQ6MZQ0 368 aa11.04□□□□□ -0.64
NR1I3-230ENST00000511944 SLC16A10Q8TF71 515 aa11.04□□□□□ -0.64
NR1I3-230ENST00000511944 RUFY2Q8WXA3 655 aa11.04□□□□□ -0.64
NR1I3-230ENST00000511944 LPIN2Q92539 896 aa11.04□□□□□ -0.64
NR1I3-230ENST00000511944 ZNF594Q96JF6 807 aaPredicted RBP11.04□□□□□ -0.64
NR1I3-230ENST00000511944 TBC1D32Q96NH3 1257 aa11.04□□□□□ -0.64
NR1I3-230ENST00000511944 NPHP1O15259 732 aa11.03□□□□□ -0.64
NR1I3-230ENST00000511944 UQCRFS1P1P0C7P4 283 aa11.03□□□□□ -0.64
NR1I3-230ENST00000511944 CHMLP26374 656 aa11.03□□□□□ -0.64
NR1I3-230ENST00000511944 HOXA10P31260 410 aaPredicted RBP11.03□□□□□ -0.64
NR1I3-230ENST00000511944 CCDC158Q5M9N0 1113 aa11.03□□□□□ -0.64
NR1I3-230ENST00000511944 BICDL1Q6ZP65 573 aa11.03□□□□□ -0.64
NR1I3-230ENST00000511944 DDX46Q7L014 1031 aaKnown RBP11.03□□□□□ -0.64
NR1I3-230ENST00000511944 COL23A1Q86Y22 540 aaPredicted RBP11.03□□□□□ -0.64
NR1I3-230ENST00000511944 SULF1Q8IWU6 871 aa11.03□□□□□ -0.64
NR1I3-230ENST00000511944 HAUS7Q99871 368 aa11.03□□□□□ -0.64
NR1I3-230ENST00000511944 PUS3Q9BZE2 481 aaKnown RBP11.03□□□□□ -0.64
NR1I3-230ENST00000511944 FAM117AQ9C073 453 aa11.03□□□□□ -0.64
NR1I3-230ENST00000511944 ANKRD2Q9GZV1 360 aa11.03□□□□□ -0.64
NR1I3-230ENST00000511944 CCDC8Q9H0W5 538 aaPredicted RBP11.03□□□□□ -0.64
NR1I3-230ENST00000511944 SNRKQ9NRH2 765 aa11.03□□□□□ -0.64
NR1I3-230ENST00000511944 FAM177BA6PVY3 158 aa11.02□□□□□ -0.65
NR1I3-230ENST00000511944 CFHP08603 1231 aa11.02□□□□□ -0.65
NR1I3-230ENST00000511944 IFIT1P09914 478 aaKnown RBP11.02□□□□□ -0.65
NR1I3-230ENST00000511944 SLC5A1P13866 664 aa11.02□□□□□ -0.65
NR1I3-230ENST00000511944 RPS8P62241 208 aaKnown RBP11.02□□□□□ -0.65
NR1I3-230ENST00000511944 GRAPQ13588 217 aa11.02□□□□□ -0.65
NR1I3-230ENST00000511944 UBE4AQ14139 1066 aa11.02□□□□□ -0.65
NR1I3-230ENST00000511944 TMED8Q6PL24 325 aaPredicted RBP11.02□□□□□ -0.65
NR1I3-230ENST00000511944 GRAPLQ8TC17 118 aaPredicted RBP11.02□□□□□ -0.65
NR1I3-230ENST00000511944 DDRGK1Q96HY6 314 aa11.02□□□□□ -0.65
NR1I3-230ENST00000511944 CRAMP1Q96RY5 1269 aa11.02□□□□□ -0.65
NR1I3-230ENST00000511944 DBNDD2Q9BQY9 259 aa11.02□□□□□ -0.65
NR1I3-230ENST00000511944 BRIP1Q9BX63 1249 aa11.02□□□□□ -0.65
NR1I3-230ENST00000511944 TLR7Q9NYK1 1049 aaKnown RBP11.02□□□□□ -0.65
NR1I3-230ENST00000511944 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.02□□□□□ -0.65
NR1I3-230ENST00000511944 TNRC6CQ9HCJ0 1690 aaKnown RBP11.01□□□□□ -0.65
NR1I3-230ENST00000511944 ARID4AP29374 1257 aaPredicted RBP11.01□□□□□ -0.65
NR1I3-230ENST00000511944 GCGRP47871 477 aa11.01□□□□□ -0.65
NR1I3-230ENST00000511944 DDR1Q08345 913 aa11.01□□□□□ -0.65
NR1I3-230ENST00000511944 EZH2Q15910 746 aaKnown RBP11.01□□□□□ -0.65
NR1I3-230ENST00000511944 XAGE2Q96GT9 111 aa11.01□□□□□ -0.65
NR1I3-230ENST00000511944 ESYT1Q9BSJ8 1104 aa11.01□□□□□ -0.65
NR1I3-230ENST00000511944 BEGAINQ9BUH8 593 aa11.01□□□□□ -0.65
NR1I3-230ENST00000511944 SEC31BQ9NQW1 1179 aa11.01□□□□□ -0.65
NR1I3-230ENST00000511944 PDS5AQ29RF7 1337 aaKnown RBP11.01□□□□□ -0.65
NR1I3-230ENST00000511944 CASZ1Q86V15 1759 aa11□□□□□ -0.65
NR1I3-230ENST00000511944 BBOX1O75936 387 aa11□□□□□ -0.65
NR1I3-230ENST00000511944 ZFYP08048 801 aaPredicted RBP11□□□□□ -0.65
NR1I3-230ENST00000511944 PDE6BP35913 854 aa11□□□□□ -0.65
NR1I3-230ENST00000511944 TTF1Q15361 905 aaPredicted RBP11□□□□□ -0.65
NR1I3-230ENST00000511944 GORABQ5T7V8 394 aa11□□□□□ -0.65
NR1I3-230ENST00000511944 TSHZ3Q63HK5 1081 aa11□□□□□ -0.65
NR1I3-230ENST00000511944 SMIM5Q71RC9 77 aa11□□□□□ -0.65
NR1I3-230ENST00000511944 KBTBD3Q8NAB2 608 aa11□□□□□ -0.65
NR1I3-230ENST00000511944 RILPL2Q969X0 211 aa11□□□□□ -0.65
NR1I3-230ENST00000511944 IL17RAQ96F46 866 aa11□□□□□ -0.65
NR1I3-230ENST00000511944 RBM17Q96I25 401 aaKnown RBP11□□□□□ -0.65
NR1I3-230ENST00000511944 NEUROD6Q96NK8 337 aa11□□□□□ -0.65
NR1I3-230ENST00000511944 CCDC85AQ96PX6 553 aaPredicted RBP11□□□□□ -0.65
NR1I3-230ENST00000511944 C22orf23Q9BZE7 217 aa11□□□□□ -0.65
NR1I3-230ENST00000511944 DIAPH3Q9NSV4 1193 aa11□□□□□ -0.65
NR1I3-230ENST00000511944 PARP3Q9Y6F1 533 aa11□□□□□ -0.65
NR1I3-230ENST00000511944 ZNF804BA4D1E1 1349 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms