RNA–Protein interactions for RNA: ENST00000511895.1

LINC01088-208, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 2 BASIC

Gene LINC01088, Length 795 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-208ENST00000511895 VTI1BQ9UEU0 232 aa9.73□□□□□ -0.85
LINC01088-208ENST00000511895 TTF2Q9UNY4 1162 aaKnown RBP9.73□□□□□ -0.85
LINC01088-208ENST00000511895 TM4SF5O14894 197 aa9.72□□□□□ -0.85
LINC01088-208ENST00000511895 SORBS3O60504 671 aa9.72□□□□□ -0.85
LINC01088-208ENST00000511895 FBXO24O75426 580 aa9.72□□□□□ -0.85
LINC01088-208ENST00000511895 GATA4P43694 442 aa9.72□□□□□ -0.85
LINC01088-208ENST00000511895 IREB2P48200 963 aaKnown RBP9.72□□□□□ -0.85
LINC01088-208ENST00000511895 ADGRE1Q14246 886 aa9.72□□□□□ -0.85
LINC01088-208ENST00000511895 TMC4Q7Z404 712 aa9.72□□□□□ -0.85
LINC01088-208ENST00000511895 AGGF1Q8N302 714 aaeCLIP9.72□□□□□ -0.85
LINC01088-208ENST00000511895 TMEM39AQ9NV64 488 aa9.72□□□□□ -0.85
LINC01088-208ENST00000511895 F8W735 103 aaPredicted RBP9.71□□□□□ -0.86
LINC01088-208ENST00000511895 ALX3O95076 343 aa9.71□□□□□ -0.86
LINC01088-208ENST00000511895 CYP11A1P05108 521 aa9.71□□□□□ -0.86
LINC01088-208ENST00000511895 ITGAEP38570 1179 aa9.71□□□□□ -0.86
LINC01088-208ENST00000511895 POU4F3Q15319 338 aa9.71□□□□□ -0.86
LINC01088-208ENST00000511895 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.71□□□□□ -0.86
LINC01088-208ENST00000511895 WFDC12Q8WWY7 111 aa9.71□□□□□ -0.86
LINC01088-208ENST00000511895 CORO1BQ9BR76 489 aa9.71□□□□□ -0.86
LINC01088-208ENST00000511895 PPM1HQ9ULR3 514 aa9.71□□□□□ -0.86
LINC01088-208ENST00000511895 TXNRD3Q86VQ6 643 aa9.7□□□□□ -0.86
LINC01088-208ENST00000511895 RUSC1Q9BVN2 902 aa9.7□□□□□ -0.86
LINC01088-208ENST00000511895 CEP44Q9C0F1 390 aa9.7□□□□□ -0.86
LINC01088-208ENST00000511895 LOC100289279A0A1B0GTE1 492 aa9.69□□□□□ -0.86
LINC01088-208ENST00000511895 MSTNO14793 375 aa9.69□□□□□ -0.86
LINC01088-208ENST00000511895 ITGB2P05107 769 aa9.69□□□□□ -0.86
LINC01088-208ENST00000511895 GLB1P16278 677 aa9.69□□□□□ -0.86
LINC01088-208ENST00000511895 ZNF16P17020 682 aaPredicted RBP9.69□□□□□ -0.86
LINC01088-208ENST00000511895 MAOBP27338 520 aa9.69□□□□□ -0.86
LINC01088-208ENST00000511895 NOS3P29474 1203 aa9.69□□□□□ -0.86
LINC01088-208ENST00000511895 AP3B2Q13367 1082 aa9.69□□□□□ -0.86
LINC01088-208ENST00000511895 TMEM130Q8N3G9 435 aa9.69□□□□□ -0.86
LINC01088-208ENST00000511895 KIAA1211Q6ZU35 1233 aa9.68□□□□□ -0.86
LINC01088-208ENST00000511895 TRIM56Q9BRZ2 755 aaKnown RBP9.68□□□□□ -0.86
LINC01088-208ENST00000511895 PDE3AQ14432 1141 aa9.67□□□□□ -0.86
LINC01088-208ENST00000511895 RGS22Q8NE09 1264 aa9.67□□□□□ -0.86
LINC01088-208ENST00000511895 NECAB3Q96P71 396 aaPredicted RBP9.67□□□□□ -0.86
LINC01088-208ENST00000511895 SPOCK3Q9BQ16 436 aa9.67□□□□□ -0.86
LINC01088-208ENST00000511895 RNF208Q9H0X6 261 aa9.67□□□□□ -0.86
LINC01088-208ENST00000511895 HP1BP3Q5SSJ5 553 aaPredicted RBP9.66□□□□□ -0.86
LINC01088-208ENST00000511895 NUTM2GQ5VZR2 741 aa9.66□□□□□ -0.86
LINC01088-208ENST00000511895 ZC3H12CQ9C0D7 883 aaKnown RBP9.66□□□□□ -0.86
LINC01088-208ENST00000511895 CBX8Q9HC52 389 aa9.66□□□□□ -0.86
LINC01088-208ENST00000511895 SAMM50Q9Y512 469 aa9.66□□□□□ -0.86
LINC01088-208ENST00000511895 ECEL1O95672 775 aa9.65□□□□□ -0.86
LINC01088-208ENST00000511895 CCDC85BQ15834 202 aaPredicted RBP9.65□□□□□ -0.86
LINC01088-208ENST00000511895 MEI1Q5TIA1 1274 aa9.65□□□□□ -0.86
LINC01088-208ENST00000511895 FDX2Q6P4F2 183 aa9.65□□□□□ -0.86
LINC01088-208ENST00000511895 SULF2Q8IWU5 870 aa9.65□□□□□ -0.86
LINC01088-208ENST00000511895 CEP41Q9BYV8 373 aa9.65□□□□□ -0.86
LINC01088-208ENST00000511895 NRSN2Q9GZP1 204 aa9.65□□□□□ -0.86
LINC01088-208ENST00000511895 RBM47A0AV96 593 aaKnown RBP9.64□□□□□ -0.87
LINC01088-208ENST00000511895 SART1O43290 800 aaKnown RBP9.64□□□□□ -0.87
LINC01088-208ENST00000511895 DLGAP3O95886 979 aa9.64□□□□□ -0.87
LINC01088-208ENST00000511895 IGHA1P01876 353 aa9.64□□□□□ -0.87
LINC01088-208ENST00000511895 CELA3AP09093 270 aa9.64□□□□□ -0.87
LINC01088-208ENST00000511895 EXOSC6Q5RKV6 272 aaKnown RBP9.64□□□□□ -0.87
LINC01088-208ENST00000511895 KCNB2Q92953 911 aa9.64□□□□□ -0.87
LINC01088-208ENST00000511895 CRELD1Q96HD1 420 aa9.64□□□□□ -0.87
LINC01088-208ENST00000511895 RAD18Q9NS91 495 aa9.64□□□□□ -0.87
LINC01088-208ENST00000511895 ENC1O14682 589 aa9.63□□□□□ -0.87
LINC01088-208ENST00000511895 PROCP04070 461 aa9.63□□□□□ -0.87
LINC01088-208ENST00000511895 CTSBP07858 339 aa9.63□□□□□ -0.87
LINC01088-208ENST00000511895 GSTP1P09211 210 aaKnown RBP9.63□□□□□ -0.87
LINC01088-208ENST00000511895 CTSHP09668 335 aa9.63□□□□□ -0.87
LINC01088-208ENST00000511895 NME2P22392 152 aa9.63□□□□□ -0.87
LINC01088-208ENST00000511895 DOC2BQ14184 412 aa9.63□□□□□ -0.87
LINC01088-208ENST00000511895 TAF1CQ15572 869 aaPredicted RBP9.63□□□□□ -0.87
LINC01088-208ENST00000511895 MEGF10Q96KG7 1140 aa9.63□□□□□ -0.87
LINC01088-208ENST00000511895 EMILIN2Q9BXX0 1053 aa9.63□□□□□ -0.87
LINC01088-208ENST00000511895 CYP4F12Q9HCS2 524 aa9.63□□□□□ -0.87
LINC01088-208ENST00000511895 PAGE1O75459 146 aa9.62□□□□□ -0.87
LINC01088-208ENST00000511895 ARNTP27540 789 aa9.62□□□□□ -0.87
LINC01088-208ENST00000511895 HNRNPUQ00839 825 aaKnown RBP eCLIP9.62□□□□□ -0.87
LINC01088-208ENST00000511895 ANKRD34AQ69YU3 496 aa9.62□□□□□ -0.87
LINC01088-208ENST00000511895 SV2BQ7L1I2 683 aa9.62□□□□□ -0.87
LINC01088-208ENST00000511895 C12orf50Q8NA57 414 aaPredicted RBP9.62□□□□□ -0.87
LINC01088-208ENST00000511895 ANKRD24Q8TF21 1146 aa9.62□□□□□ -0.87
LINC01088-208ENST00000511895 TP53INP1Q96A56 240 aa9.62□□□□□ -0.87
LINC01088-208ENST00000511895 TMPRSS13Q9BYE2 586 aa9.62□□□□□ -0.87
LINC01088-208ENST00000511895 MEGF11A6BM72 1044 aa9.61□□□□□ -0.87
LINC01088-208ENST00000511895 MAP3K11Q16584 847 aa9.61□□□□□ -0.87
LINC01088-208ENST00000511895 MAP1SQ66K74 1059 aaPredicted RBP9.61□□□□□ -0.87
LINC01088-208ENST00000511895 STK35Q8TDR2 534 aa9.61□□□□□ -0.87
LINC01088-208ENST00000511895 AKAP4Q5JQC9 854 aa9.6□□□□□ -0.87
LINC01088-208ENST00000511895 PCNX4Q63HM2 1172 aa9.6□□□□□ -0.87
LINC01088-208ENST00000511895 Q6ZS46 218 aa9.6□□□□□ -0.87
LINC01088-208ENST00000511895 CCDC86Q9H6F5 360 aaKnown RBP9.6□□□□□ -0.87
LINC01088-208ENST00000511895 TPSG1Q9NRR2 321 aa9.6□□□□□ -0.87
LINC01088-208ENST00000511895 GAS2O43903 313 aaKnown RBP9.59□□□□□ -0.87
LINC01088-208ENST00000511895 LIG1P18858 919 aa9.59□□□□□ -0.87
LINC01088-208ENST00000511895 LMNB1P20700 586 aa9.59□□□□□ -0.87
LINC01088-208ENST00000511895 ST13P50502 369 aaKnown RBP9.59□□□□□ -0.87
LINC01088-208ENST00000511895 MRPL58Q14197 206 aaKnown RBP9.59□□□□□ -0.87
LINC01088-208ENST00000511895 DZIP1LQ8IYY4 767 aaKnown RBP9.59□□□□□ -0.87
LINC01088-208ENST00000511895 SMG8Q8ND04 991 aaKnown RBP9.59□□□□□ -0.87
LINC01088-208ENST00000511895 ACSBG1Q96GR2 724 aa9.59□□□□□ -0.87
LINC01088-208ENST00000511895 UBL7Q96S82 380 aaPredicted RBP9.59□□□□□ -0.87
LINC01088-208ENST00000511895 USP31Q70CQ4 1352 aa9.59□□□□□ -0.87
LINC01088-208ENST00000511895 DRD2P14416 443 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms