RNA–Protein interactions for RNA: ENST00000506783.5

PHF3-208, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 3,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-208ENST00000506783 DHX58Q96C10 678 aa11.09□□□□□ -0.63
PHF3-208ENST00000506783 VAT1LQ9HCJ6 419 aa11.09□□□□□ -0.63
PHF3-208ENST00000506783 KIF24Q5T7B8 1368 aa11.09□□□□□ -0.63
PHF3-208ENST00000506783 FAM193AP78312 1265 aa11.09□□□□□ -0.63
PHF3-208ENST00000506783 NR5A1Q13285 461 aa11.09□□□□□ -0.63
PHF3-208ENST00000506783 SAFBQ15424 915 aaKnown RBP eCLIP11.09□□□□□ -0.63
PHF3-208ENST00000506783 NCOA7Q8NI08 942 aa11.09□□□□□ -0.63
PHF3-208ENST00000506783 SEC31BQ9NQW1 1179 aa11.09□□□□□ -0.63
PHF3-208ENST00000506783 KDRP35968 1356 aa11.09□□□□□ -0.63
PHF3-208ENST00000506783 SPATA31D1Q6ZQQ2 1576 aa11.09□□□□□ -0.63
PHF3-208ENST00000506783 MBD4O95243 580 aa11.09□□□□□ -0.63
PHF3-208ENST00000506783 TOP1P11387 765 aaKnown RBP11.09□□□□□ -0.63
PHF3-208ENST00000506783 PRIMPOLQ96LW4 560 aa11.09□□□□□ -0.63
PHF3-208ENST00000506783 CABP5Q9NP86 173 aa11.09□□□□□ -0.63
PHF3-208ENST00000506783 HMG20BQ9P0W2 317 aa11.09□□□□□ -0.63
PHF3-208ENST00000506783 PPP1R1BQ9UD71 204 aaPredicted RBP11.09□□□□□ -0.63
PHF3-208ENST00000506783 CCT6AP40227 531 aaKnown RBP11.08□□□□□ -0.64
PHF3-208ENST00000506783 RESTQ13127 1097 aa11.08□□□□□ -0.64
PHF3-208ENST00000506783 KCTD19Q17RG1 926 aaPredicted RBP11.08□□□□□ -0.64
PHF3-208ENST00000506783 LRRC8AQ8IWT6 810 aa11.08□□□□□ -0.64
PHF3-208ENST00000506783 ERBB3P21860 1342 aa11.08□□□□□ -0.64
PHF3-208ENST00000506783 VGLL3A8MV65 326 aa11.08□□□□□ -0.64
PHF3-208ENST00000506783 POLR2DO15514 142 aaKnown RBP11.08□□□□□ -0.64
PHF3-208ENST00000506783 CTDNEP1O95476 244 aa11.08□□□□□ -0.64
PHF3-208ENST00000506783 ARHGAP29Q52LW3 1261 aa11.08□□□□□ -0.64
PHF3-208ENST00000506783 LRRN4CLQ8ND94 238 aa11.08□□□□□ -0.64
PHF3-208ENST00000506783 UBXN4Q92575 508 aa11.08□□□□□ -0.64
PHF3-208ENST00000506783 SPATA31A3Q5VYP0 1347 aa11.08□□□□□ -0.64
PHF3-208ENST00000506783 KIF28PB7ZC32 967 aa11.08□□□□□ -0.64
PHF3-208ENST00000506783 TMEM232C9JQI7 657 aa11.08□□□□□ -0.64
PHF3-208ENST00000506783 SEC31AO94979 1220 aaKnown RBP11.08□□□□□ -0.64
PHF3-208ENST00000506783 FAM160A1Q05DH4 1040 aa11.08□□□□□ -0.64
PHF3-208ENST00000506783 IRX2Q9BZI1 471 aaPredicted RBP11.08□□□□□ -0.64
PHF3-208ENST00000506783 FANCLQ9NW38 375 aa11.08□□□□□ -0.64
PHF3-208ENST00000506783 KNDC1Q76NI1 1749 aa11.08□□□□□ -0.64
PHF3-208ENST00000506783 OVOS2A0A0J9YW53 1432 aa11.07□□□□□ -0.64
PHF3-208ENST00000506783 OVOS2Q6IE36 1432 aa11.07□□□□□ -0.64
PHF3-208ENST00000506783 ZNF532Q9HCE3 1301 aa11.07□□□□□ -0.64
PHF3-208ENST00000506783 IRS4O14654 1257 aaPredicted RBP11.07□□□□□ -0.64
PHF3-208ENST00000506783 ZBTB43O43298 467 aa11.07□□□□□ -0.64
PHF3-208ENST00000506783 IL15P40933 162 aaPredicted RBP11.07□□□□□ -0.64
PHF3-208ENST00000506783 BCAMP50895 628 aa11.07□□□□□ -0.64
PHF3-208ENST00000506783 PFKFB1P16118 471 aa11.07□□□□□ -0.64
PHF3-208ENST00000506783 ATP2B2Q01814 1243 aa11.07□□□□□ -0.64
PHF3-208ENST00000506783 MTX1Q13505 466 aa11.07□□□□□ -0.64
PHF3-208ENST00000506783 HAUS7Q99871 368 aa11.07□□□□□ -0.64
PHF3-208ENST00000506783 UBAC1Q9BSL1 405 aa11.07□□□□□ -0.64
PHF3-208ENST00000506783 TM6SF1Q9BZW5 370 aa11.07□□□□□ -0.64
PHF3-208ENST00000506783 ZSCAN16Q9H4T2 348 aaPredicted RBP11.07□□□□□ -0.64
PHF3-208ENST00000506783 FER1L4A9Z1Z3 1794 aa11.07□□□□□ -0.64
PHF3-208ENST00000506783 MCM6Q14566 821 aa11.07□□□□□ -0.64
PHF3-208ENST00000506783 ZNF174Q15697 407 aa11.07□□□□□ -0.64
PHF3-208ENST00000506783 KRT40Q6A162 431 aa11.07□□□□□ -0.64
PHF3-208ENST00000506783 NKX2-3Q8TAU0 364 aa11.07□□□□□ -0.64
PHF3-208ENST00000506783 DCAF5Q96JK2 942 aa11.07□□□□□ -0.64
PHF3-208ENST00000506783 CARD6Q9BX69 1037 aa11.07□□□□□ -0.64
PHF3-208ENST00000506783 BLZF1Q9H2G9 400 aa11.07□□□□□ -0.64
PHF3-208ENST00000506783 ZCCHC17Q9NP64 241 aaKnown RBP11.07□□□□□ -0.64
PHF3-208ENST00000506783 USP21Q9UK80 565 aa11.07□□□□□ -0.64
PHF3-208ENST00000506783 SLC4A4Q9Y6R1 1079 aa11.07□□□□□ -0.64
PHF3-208ENST00000506783 DLC1Q96QB1 1528 aa11.06□□□□□ -0.64
PHF3-208ENST00000506783 MRPS25P82663 173 aaKnown RBP11.06□□□□□ -0.64
PHF3-208ENST00000506783 PLBD2Q8NHP8 589 aa11.06□□□□□ -0.64
PHF3-208ENST00000506783 DPF2Q92785 391 aa11.06□□□□□ -0.64
PHF3-208ENST00000506783 VPS54Q9P1Q0 977 aa11.06□□□□□ -0.64
PHF3-208ENST00000506783 GRIN1Q05586 938 aa11.06□□□□□ -0.64
PHF3-208ENST00000506783 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.06□□□□□ -0.64
PHF3-208ENST00000506783 ZNF609O15014 1411 aa11.06□□□□□ -0.64
PHF3-208ENST00000506783 CDC42BPGQ6DT37 1551 aa11.06□□□□□ -0.64
PHF3-208ENST00000506783 TFRCP02786 760 aaKnown RBP11.06□□□□□ -0.64
PHF3-208ENST00000506783 NCBP1Q09161 790 aaKnown RBP11.06□□□□□ -0.64
PHF3-208ENST00000506783 MYSM1Q5VVJ2 828 aa11.06□□□□□ -0.64
PHF3-208ENST00000506783 DRC1Q96MC2 740 aa11.06□□□□□ -0.64
PHF3-208ENST00000506783 TRIM34Q9BYJ4 488 aa11.06□□□□□ -0.64
PHF3-208ENST00000506783 CTNNA3Q9UI47 895 aa11.06□□□□□ -0.64
PHF3-208ENST00000506783 COL15A1P39059 1388 aa11.05□□□□□ -0.64
PHF3-208ENST00000506783 ANKRD18BA2A2Z9 1011 aa11.05□□□□□ -0.64
PHF3-208ENST00000506783 STARD3NLO95772 234 aa11.05□□□□□ -0.64
PHF3-208ENST00000506783 GUCY1A2P33402 732 aa11.05□□□□□ -0.64
PHF3-208ENST00000506783 ANO1Q5XXA6 986 aa11.05□□□□□ -0.64
PHF3-208ENST00000506783 USP49Q70CQ1 688 aa11.05□□□□□ -0.64
PHF3-208ENST00000506783 COPRSQ9NQ92 184 aa11.05□□□□□ -0.64
PHF3-208ENST00000506783 FAM205CA6NFA0 338 aa11.05□□□□□ -0.64
PHF3-208ENST00000506783 ATP6V1AP38606 617 aa11.05□□□□□ -0.64
PHF3-208ENST00000506783 FANCCQ00597 558 aa11.05□□□□□ -0.64
PHF3-208ENST00000506783 TFCP2L1Q9NZI6 479 aa11.05□□□□□ -0.64
PHF3-208ENST00000506783 KIAA1210Q9ULL0 1709 aa11.05□□□□□ -0.64
PHF3-208ENST00000506783 FAM47AQ5JRC9 791 aa11.05□□□□□ -0.64
PHF3-208ENST00000506783 PSMB7Q99436 277 aa11.05□□□□□ -0.64
PHF3-208ENST00000506783 SRRTQ9BXP5 876 aaKnown RBP11.05□□□□□ -0.64
PHF3-208ENST00000506783 AOX1Q06278 1338 aa11.04□□□□□ -0.64
PHF3-208ENST00000506783 ANKRD65E5RJM6 399 aa11.04□□□□□ -0.64
PHF3-208ENST00000506783 RHOXF2BP0C7M4 288 aa11.04□□□□□ -0.64
PHF3-208ENST00000506783 GYG1P46976 350 aa11.04□□□□□ -0.64
PHF3-208ENST00000506783 RHOXF2Q9BQY4 288 aa11.04□□□□□ -0.64
PHF3-208ENST00000506783 KIAA1468Q9P260 1216 aa11.04□□□□□ -0.64
PHF3-208ENST00000506783 C1orf167Q5SNV9 1468 aa11.04□□□□□ -0.64
PHF3-208ENST00000506783 WDHD1O75717 1129 aaPredicted RBP11.04□□□□□ -0.64
PHF3-208ENST00000506783 FDPSP14324 419 aaKnown RBP11.04□□□□□ -0.64
PHF3-208ENST00000506783 CYP7A1P22680 504 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms