RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 TRAK1Q9UPV9 953 aa6.39□□□□□ -1.39
HMGB1P29-201ENST00000505659 RAXQ9Y2V3 346 aa6.39□□□□□ -1.39
HMGB1P29-201ENST00000505659 MEGF11A6BM72 1044 aa6.38□□□□□ -1.39
HMGB1P29-201ENST00000505659 PATL2C9JE40 543 aaKnown RBP6.38□□□□□ -1.39
HMGB1P29-201ENST00000505659 DHX15O43143 795 aaKnown RBP6.38□□□□□ -1.39
HMGB1P29-201ENST00000505659 TIAF1O95411 115 aa6.38□□□□□ -1.39
HMGB1P29-201ENST00000505659 BMP3P12645 472 aa6.38□□□□□ -1.39
HMGB1P29-201ENST00000505659 PTPN12Q05209 780 aaKnown RBP6.38□□□□□ -1.39
HMGB1P29-201ENST00000505659 POU4F3Q15319 338 aa6.38□□□□□ -1.39
HMGB1P29-201ENST00000505659 SGO2Q562F6 1265 aa6.38□□□□□ -1.39
HMGB1P29-201ENST00000505659 NUTM2GQ5VZR2 741 aa6.38□□□□□ -1.39
HMGB1P29-201ENST00000505659 DTHD1Q6ZMT9 781 aa6.38□□□□□ -1.39
HMGB1P29-201ENST00000505659 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.38□□□□□ -1.39
HMGB1P29-201ENST00000505659 TRIM42Q8IWZ5 723 aa6.38□□□□□ -1.39
HMGB1P29-201ENST00000505659 C12orf50Q8NA57 414 aaPredicted RBP6.38□□□□□ -1.39
HMGB1P29-201ENST00000505659 C7orf69Q9H7B7 122 aa6.38□□□□□ -1.39
HMGB1P29-201ENST00000505659 HMX2A2RU54 273 aa6.37□□□□□ -1.39
HMGB1P29-201ENST00000505659 UVSSAQ2YD98 709 aa6.37□□□□□ -1.39
HMGB1P29-201ENST00000505659 FAM20CQ8IXL6 584 aa6.37□□□□□ -1.39
HMGB1P29-201ENST00000505659 Q8N3U1 123 aa6.37□□□□□ -1.39
HMGB1P29-201ENST00000505659 SMG8Q8ND04 991 aaKnown RBP6.37□□□□□ -1.39
HMGB1P29-201ENST00000505659 OSBPL7Q9BZF2 842 aa6.37□□□□□ -1.39
HMGB1P29-201ENST00000505659 ZC3H12CQ9C0D7 883 aaKnown RBP6.37□□□□□ -1.39
HMGB1P29-201ENST00000505659 RNF19AQ9NV58 838 aa6.37□□□□□ -1.39
HMGB1P29-201ENST00000505659 STOML1Q9UBI4 398 aa6.37□□□□□ -1.39
HMGB1P29-201ENST00000505659 GAS2O43903 313 aaKnown RBP6.36□□□□□ -1.39
HMGB1P29-201ENST00000505659 CYP11A1P05108 521 aa6.36□□□□□ -1.39
HMGB1P29-201ENST00000505659 EXOSC6Q5RKV6 272 aaKnown RBP6.36□□□□□ -1.39
HMGB1P29-201ENST00000505659 C3orf58Q8NDZ4 430 aa6.36□□□□□ -1.39
HMGB1P29-201ENST00000505659 STK35Q8TDR2 534 aa6.36□□□□□ -1.39
HMGB1P29-201ENST00000505659 KCNF1Q9H3M0 494 aa6.36□□□□□ -1.39
HMGB1P29-201ENST00000505659 SUGCTQ9HAC7 445 aa6.36□□□□□ -1.39
HMGB1P29-201ENST00000505659 GPN3Q9UHW5 284 aaPredicted RBP6.36□□□□□ -1.39
HMGB1P29-201ENST00000505659 AKAP2Q9Y2D5 859 aa6.36□□□□□ -1.39
HMGB1P29-201ENST00000505659 FBXO24O75426 580 aa6.35□□□□□ -1.39
HMGB1P29-201ENST00000505659 ADH5P11766 374 aa6.35□□□□□ -1.39
HMGB1P29-201ENST00000505659 RPS26P11Q5JNZ5 115 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P29-201ENST00000505659 AKAP4Q5JQC9 854 aa6.35□□□□□ -1.39
HMGB1P29-201ENST00000505659 BEND4Q6ZU67 534 aa6.35□□□□□ -1.39
HMGB1P29-201ENST00000505659 C2CD4AQ8NCU7 369 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P29-201ENST00000505659 CORO1BQ9BR76 489 aa6.35□□□□□ -1.39
HMGB1P29-201ENST00000505659 CYP4F12Q9HCS2 524 aa6.35□□□□□ -1.39
HMGB1P29-201ENST00000505659 SCO2A0A1W2PP80 73 aa6.34□□□□□ -1.39
HMGB1P29-201ENST00000505659 ANKRD33BA6NCL7 494 aa6.34□□□□□ -1.39
HMGB1P29-201ENST00000505659 LDHBP07195 334 aaKnown RBP6.34□□□□□ -1.39
HMGB1P29-201ENST00000505659 MAP4P27816 1152 aaKnown RBP6.34□□□□□ -1.39
HMGB1P29-201ENST00000505659 SOX4Q06945 474 aaPredicted RBP6.34□□□□□ -1.39
HMGB1P29-201ENST00000505659 PDE3AQ14432 1141 aa6.34□□□□□ -1.39
HMGB1P29-201ENST00000505659 CDPF1Q6NVV7 123 aa6.34□□□□□ -1.39
HMGB1P29-201ENST00000505659 FBF1Q8TES7 1133 aa6.34□□□□□ -1.39
HMGB1P29-201ENST00000505659 FBLIM1Q8WUP2 373 aa6.34□□□□□ -1.39
HMGB1P29-201ENST00000505659 WDR89Q96FK6 387 aaPredicted RBP6.34□□□□□ -1.39
HMGB1P29-201ENST00000505659 CCDC86Q9H6F5 360 aaKnown RBP6.34□□□□□ -1.39
HMGB1P29-201ENST00000505659 IGLV1-40P01703 118 aa6.33□□□□□ -1.4
HMGB1P29-201ENST00000505659 LIG1P18858 919 aa6.33□□□□□ -1.4
HMGB1P29-201ENST00000505659 RXRBP28702 533 aa6.33□□□□□ -1.4
HMGB1P29-201ENST00000505659 ATP2B2Q01814 1243 aa6.33□□□□□ -1.4
HMGB1P29-201ENST00000505659 AP3B2Q13367 1082 aa6.33□□□□□ -1.4
HMGB1P29-201ENST00000505659 XP32Q5T750 250 aa6.33□□□□□ -1.4
HMGB1P29-201ENST00000505659 ALG1LQ6GMV1 187 aa6.33□□□□□ -1.4
HMGB1P29-201ENST00000505659 TPTE2Q6XPS3 522 aa6.33□□□□□ -1.4
HMGB1P29-201ENST00000505659 SHISA5Q8N114 240 aa6.33□□□□□ -1.4
HMGB1P29-201ENST00000505659 DDX54Q8TDD1 881 aaKnown RBP6.33□□□□□ -1.4
HMGB1P29-201ENST00000505659 WDR18Q9BV38 432 aa6.33□□□□□ -1.4
HMGB1P29-201ENST00000505659 AP4E1Q9UPM8 1137 aa6.33□□□□□ -1.4
HMGB1P29-201ENST00000505659 ACTL7BQ9Y614 415 aa6.33□□□□□ -1.4
HMGB1P29-201ENST00000505659 AOC2O75106 756 aa6.32□□□□□ -1.4
HMGB1P29-201ENST00000505659 TGFB1P01137 390 aa6.32□□□□□ -1.4
HMGB1P29-201ENST00000505659 NFIAQ12857 509 aa6.32□□□□□ -1.4
HMGB1P29-201ENST00000505659 DNAJC14Q6Y2X3 702 aaPredicted RBP6.32□□□□□ -1.4
HMGB1P29-201ENST00000505659 PDZD3Q86UT5 571 aa6.32□□□□□ -1.4
HMGB1P29-201ENST00000505659 CLEC10AQ8IUN9 316 aa6.32□□□□□ -1.4
HMGB1P29-201ENST00000505659 FAM83CQ9BQN1 747 aa6.32□□□□□ -1.4
HMGB1P29-201ENST00000505659 RAD18Q9NS91 495 aa6.32□□□□□ -1.4
HMGB1P29-201ENST00000505659 FAM105AQ9NUU6 356 aa6.32□□□□□ -1.4
HMGB1P29-201ENST00000505659 TMEM39AQ9NV64 488 aa6.32□□□□□ -1.4
HMGB1P29-201ENST00000505659 PPP4R2Q9NY27 417 aa6.32□□□□□ -1.4
HMGB1P29-201ENST00000505659 PPP1R9AQ9ULJ8 1098 aa6.32□□□□□ -1.4
HMGB1P29-201ENST00000505659 HIF3AQ9Y2N7 669 aa6.32□□□□□ -1.4
HMGB1P29-201ENST00000505659 ZNF862O60290 1169 aa6.31□□□□□ -1.4
HMGB1P29-201ENST00000505659 PAGE1O75459 146 aa6.31□□□□□ -1.4
HMGB1P29-201ENST00000505659 GSTP1P09211 210 aaKnown RBP6.31□□□□□ -1.4
HMGB1P29-201ENST00000505659 XRCC5P13010 732 aaKnown RBP6.31□□□□□ -1.4
HMGB1P29-201ENST00000505659 RAB6AP20340 208 aa6.31□□□□□ -1.4
HMGB1P29-201ENST00000505659 GSTT1P30711 240 aa6.31□□□□□ -1.4
HMGB1P29-201ENST00000505659 USP11P51784 963 aa6.31□□□□□ -1.4
HMGB1P29-201ENST00000505659 RNF43Q68DV7 783 aa6.31□□□□□ -1.4
HMGB1P29-201ENST00000505659 MPRIPQ6WCQ1 1025 aa6.31□□□□□ -1.4
HMGB1P29-201ENST00000505659 DYMQ7RTS9 669 aa6.31□□□□□ -1.4
HMGB1P29-201ENST00000505659 ZDHHC13Q8IUH4 622 aa6.31□□□□□ -1.4
HMGB1P29-201ENST00000505659 NPAS4Q8IUM7 802 aa6.31□□□□□ -1.4
HMGB1P29-201ENST00000505659 SULF2Q8IWU5 870 aa6.31□□□□□ -1.4
HMGB1P29-201ENST00000505659 GZF1Q9H116 711 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P29-201ENST00000505659 C12orf49Q9H741 205 aa6.31□□□□□ -1.4
HMGB1P29-201ENST00000505659 ENC1O14682 589 aa6.3□□□□□ -1.4
HMGB1P29-201ENST00000505659 EIF4EBP3O60516 100 aaPredicted RBP6.3□□□□□ -1.4
HMGB1P29-201ENST00000505659 USP17L7P0C7H9 530 aa6.3□□□□□ -1.4
HMGB1P29-201ENST00000505659 PPP2R3AQ06190 1150 aa6.3□□□□□ -1.4
HMGB1P29-201ENST00000505659 RASIP1Q5U651 963 aa6.3□□□□□ -1.4
HMGB1P29-201ENST00000505659 KCNB2Q92953 911 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms