RNA–Protein interactions for RNA: ENST00000504524.5

PLXND1-204, Transcript of plexin D1, humanhuman

TSL 1 (best)

Gene PLXND1, Length 1,701 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXND1-204ENST00000504524 ALDH1B1P30837 517 aa21.86■■□□□ 1.09
PLXND1-204ENST00000504524 ARMT1Q9H993 441 aa21.86■■□□□ 1.09
PLXND1-204ENST00000504524 SALL1Q9NSC2 1324 aa21.86■■□□□ 1.09
PLXND1-204ENST00000504524 RAI14Q9P0K7 980 aa21.86■■□□□ 1.09
PLXND1-204ENST00000504524 LIMCH1Q9UPQ0 1083 aa21.86■■□□□ 1.09
PLXND1-204ENST00000504524 FRAT2O75474 233 aaPredicted RBP21.86■■□□□ 1.09
PLXND1-204ENST00000504524 CYP7A1P22680 504 aa21.86■■□□□ 1.09
PLXND1-204ENST00000504524 CHAF1AQ13111 956 aaPredicted RBP21.86■■□□□ 1.09
PLXND1-204ENST00000504524 C2CD5Q86YS7 1000 aa21.86■■□□□ 1.09
PLXND1-204ENST00000504524 LCORLQ8N3X6 602 aa21.86■■□□□ 1.09
PLXND1-204ENST00000504524 EPB41L4AQ9HCS5 686 aaPredicted RBP21.86■■□□□ 1.09
PLXND1-204ENST00000504524 E7EWF7 191 aa21.85■■□□□ 1.09
PLXND1-204ENST00000504524 LARGE1O95461 756 aa21.85■■□□□ 1.09
PLXND1-204ENST00000504524 ALX1Q15699 326 aa21.85■■□□□ 1.09
PLXND1-204ENST00000504524 STYK1Q6J9G0 422 aa21.85■■□□□ 1.09
PLXND1-204ENST00000504524 INTS4Q96HW7 963 aaKnown RBP21.85■■□□□ 1.09
PLXND1-204ENST00000504524 TCEANC2Q96MN5 208 aa21.85■■□□□ 1.09
PLXND1-204ENST00000504524 TOB2Q14106 344 aaPredicted RBP21.84■■□□□ 1.09
PLXND1-204ENST00000504524 CCDC125Q86Z20 511 aa21.84■■□□□ 1.09
PLXND1-204ENST00000504524 NSUN4Q96CB9 384 aaKnown RBP21.84■■□□□ 1.09
PLXND1-204ENST00000504524 LARP6Q9BRS8 491 aaKnown RBP21.84■■□□□ 1.09
PLXND1-204ENST00000504524 NBPF3Q9H094 633 aa21.84■■□□□ 1.09
PLXND1-204ENST00000504524 IL1R1P14778 569 aa21.83■■□□□ 1.09
PLXND1-204ENST00000504524 NFKBIBQ15653 356 aa21.83■■□□□ 1.09
PLXND1-204ENST00000504524 IMMTQ16891 758 aaKnown RBP21.83■■□□□ 1.09
PLXND1-204ENST00000504524 OLFM4Q6UX06 510 aa21.83■■□□□ 1.09
PLXND1-204ENST00000504524 RIOK1Q9BRS2 568 aaKnown RBP21.83■■□□□ 1.09
PLXND1-204ENST00000504524 CD209Q9NNX6 404 aa21.83■■□□□ 1.09
PLXND1-204ENST00000504524 PATL2C9JE40 543 aaKnown RBP21.83■■□□□ 1.08
PLXND1-204ENST00000504524 PRDX5P30044 214 aa21.83■■□□□ 1.08
PLXND1-204ENST00000504524 HAND2P61296 217 aa21.83■■□□□ 1.08
PLXND1-204ENST00000504524 MIGA1Q8NAN2 632 aa21.83■■□□□ 1.08
PLXND1-204ENST00000504524 CWC22Q9HCG8 908 aaKnown RBP21.83■■□□□ 1.08
PLXND1-204ENST00000504524 JAG2Q9Y219 1238 aa21.83■■□□□ 1.08
PLXND1-204ENST00000504524 GSG1L2A8MUP6 293 aa21.82■■□□□ 1.08
PLXND1-204ENST00000504524 MECOMQ03112 1051 aa21.82■■□□□ 1.08
PLXND1-204ENST00000504524 ST3GAL1Q11201 340 aa21.82■■□□□ 1.08
PLXND1-204ENST00000504524 RAB3GAP1Q15042 981 aa21.82■■□□□ 1.08
PLXND1-204ENST00000504524 NAA16Q6N069 864 aaPredicted RBP21.82■■□□□ 1.08
PLXND1-204ENST00000504524 H0YIN7 160 aa21.81■■□□□ 1.08
PLXND1-204ENST00000504524 PRKAB2O43741 272 aa21.81■■□□□ 1.08
PLXND1-204ENST00000504524 HMGB1P09429 215 aaKnown RBP21.81■■□□□ 1.08
PLXND1-204ENST00000504524 GNAT2P19087 354 aa21.81■■□□□ 1.08
PLXND1-204ENST00000504524 EXOSC10Q01780 885 aaKnown RBP21.81■■□□□ 1.08
PLXND1-204ENST00000504524 WDR66Q8TBY9 1149 aa21.81■■□□□ 1.08
PLXND1-204ENST00000504524 ZNF622Q969S3 477 aaKnown RBP eCLIP21.81■■□□□ 1.08
PLXND1-204ENST00000504524 ZSCAN31Q96LW9 406 aaPredicted RBP21.81■■□□□ 1.08
PLXND1-204ENST00000504524 TPCN1Q9ULQ1 816 aa21.81■■□□□ 1.08
PLXND1-204ENST00000504524 SNED1Q8TER0 1413 aa21.81■■□□□ 1.08
PLXND1-204ENST00000504524 MAGEB6P1A0A0J9YX57 407 aa21.8■■□□□ 1.08
PLXND1-204ENST00000504524 C6orf229H3BNL8 230 aa21.8■■□□□ 1.08
PLXND1-204ENST00000504524 IGSF3O75054 1194 aa21.8■■□□□ 1.08
PLXND1-204ENST00000504524 CHRNA5P30532 468 aa21.8■■□□□ 1.08
PLXND1-204ENST00000504524 NBR1Q14596 966 aa21.8■■□□□ 1.08
PLXND1-204ENST00000504524 ANKRD1Q15327 319 aa21.8■■□□□ 1.08
PLXND1-204ENST00000504524 DHX32Q7L7V1 743 aaKnown RBP21.8■■□□□ 1.08
PLXND1-204ENST00000504524 IFNL3Q8IZI9 196 aa21.8■■□□□ 1.08
PLXND1-204ENST00000504524 SLC16A10Q8TF71 515 aa21.8■■□□□ 1.08
PLXND1-204ENST00000504524 SH2B1Q9NRF2 756 aaPredicted RBP21.8■■□□□ 1.08
PLXND1-204ENST00000504524 NAV1Q8NEY1 1877 aa21.8■■□□□ 1.08
PLXND1-204ENST00000504524 ME3Q16798 604 aa21.8■■□□□ 1.08
PLXND1-204ENST00000504524 TMED8Q6PL24 325 aaPredicted RBP21.8■■□□□ 1.08
PLXND1-204ENST00000504524 TBC1D10CQ8IV04 446 aa21.8■■□□□ 1.08
PLXND1-204ENST00000504524 MPNDQ8N594 471 aa21.8■■□□□ 1.08
PLXND1-204ENST00000504524 FOCADQ5VW36 1801 aa21.79■■□□□ 1.08
PLXND1-204ENST00000504524 ZNF213O14771 459 aa21.79■■□□□ 1.08
PLXND1-204ENST00000504524 APPP05067 770 aa21.79■■□□□ 1.08
PLXND1-204ENST00000504524 SPTY2D1Q68D10 685 aaPredicted RBP21.79■■□□□ 1.08
PLXND1-204ENST00000504524 SLC4A4Q9Y6R1 1079 aa21.79■■□□□ 1.08
PLXND1-204ENST00000504524 DYNLL1P63167 89 aaKnown RBP21.78■■□□□ 1.08
PLXND1-204ENST00000504524 Q6ZUG5 572 aa21.78■■□□□ 1.08
PLXND1-204ENST00000504524 MB21D2Q8IYB1 491 aaPredicted RBP21.78■■□□□ 1.08
PLXND1-204ENST00000504524 AGXT2Q9BYV1 514 aa21.78■■□□□ 1.08
PLXND1-204ENST00000504524 BRCA1P38398 1863 aaKnown RBP21.78■■□□□ 1.08
PLXND1-204ENST00000504524 SCN9AQ15858 1988 aa21.78■■□□□ 1.08
PLXND1-204ENST00000504524 GRIK5Q16478 980 aa21.77■■□□□ 1.08
PLXND1-204ENST00000504524 NAPBQ9H115 298 aa21.77■■□□□ 1.08
PLXND1-204ENST00000504524 DPP8Q6V1X1 898 aaPredicted RBP21.77■■□□□ 1.08
PLXND1-204ENST00000504524 PSME4Q14997 1843 aa21.77■■□□□ 1.07
PLXND1-204ENST00000504524 DDX60LQ5H9U9 1706 aaKnown RBP21.77■■□□□ 1.07
PLXND1-204ENST00000504524 FAM205AQ6ZU69 1335 aa21.76■■□□□ 1.07
PLXND1-204ENST00000504524 PKP1Q13835 747 aa21.76■■□□□ 1.07
PLXND1-204ENST00000504524 CNKSR1Q969H4 720 aa21.76■■□□□ 1.07
PLXND1-204ENST00000504524 LRRC2Q9BYS8 371 aa21.76■■□□□ 1.07
PLXND1-204ENST00000504524 LDHBP07195 334 aaKnown RBP21.75■■□□□ 1.07
PLXND1-204ENST00000504524 CCDC83Q8IWF9 413 aa21.75■■□□□ 1.07
PLXND1-204ENST00000504524 FBXL16Q8N461 479 aa21.75■■□□□ 1.07
PLXND1-204ENST00000504524 TNPO1Q92973 898 aaKnown RBP21.75■■□□□ 1.07
PLXND1-204ENST00000504524 COA1Q9GZY4 146 aa21.75■■□□□ 1.07
PLXND1-204ENST00000504524 ADAMTSL1Q8N6G6 1762 aa21.75■■□□□ 1.07
PLXND1-204ENST00000504524 ANTXR2P58335 489 aa21.75■■□□□ 1.07
PLXND1-204ENST00000504524 NUCB2P80303 420 aa21.75■■□□□ 1.07
PLXND1-204ENST00000504524 ILDR1Q86SU0 546 aaPredicted RBP21.75■■□□□ 1.07
PLXND1-204ENST00000504524 DZIP1Q86YF9 867 aaKnown RBP21.75■■□□□ 1.07
PLXND1-204ENST00000504524 NCOA7Q8NI08 942 aa21.75■■□□□ 1.07
PLXND1-204ENST00000504524 NKX2-3Q8TAU0 364 aa21.75■■□□□ 1.07
PLXND1-204ENST00000504524 SDR42E1Q8WUS8 393 aa21.75■■□□□ 1.07
PLXND1-204ENST00000504524 C7orf43Q8WVR3 580 aa21.75■■□□□ 1.07
PLXND1-204ENST00000504524 NACAP1Q9BZK3 213 aa21.75■■□□□ 1.07
PLXND1-204ENST00000504524 TACC3Q9Y6A5 838 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms