RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 DHX32Q7L7V1 743 aaKnown RBP8.76□□□□□ -1.01
NEDD9-208ENST00000504387 MICALL1Q8N3F8 863 aa8.76□□□□□ -1.01
NEDD9-208ENST00000504387 LINC00301Q8NCQ3 95 aa8.76□□□□□ -1.01
NEDD9-208ENST00000504387 RAPGEF4Q8WZA2 1011 aa8.76□□□□□ -1.01
NEDD9-208ENST00000504387 PNKPQ96T60 521 aa8.76□□□□□ -1.01
NEDD9-208ENST00000504387 MRPL44Q9H9J2 332 aaKnown RBP8.76□□□□□ -1.01
NEDD9-208ENST00000504387 TFR2Q9UP52 801 aa8.76□□□□□ -1.01
NEDD9-208ENST00000504387 KLF18A0A0U1RQI7 1052 aa8.76□□□□□ -1.01
NEDD9-208ENST00000504387 GOLGA8BA8MQT2 603 aa8.76□□□□□ -1.01
NEDD9-208ENST00000504387 HIP1O00291 1037 aa8.76□□□□□ -1.01
NEDD9-208ENST00000504387 FDPSP14324 419 aaKnown RBP8.76□□□□□ -1.01
NEDD9-208ENST00000504387 PDIA3P30101 505 aaKnown RBP8.76□□□□□ -1.01
NEDD9-208ENST00000504387 ACTN2P35609 894 aa8.76□□□□□ -1.01
NEDD9-208ENST00000504387 NLRP12P59046 1061 aa8.76□□□□□ -1.01
NEDD9-208ENST00000504387 CHMP4BP1P59074 171 aa8.76□□□□□ -1.01
NEDD9-208ENST00000504387 CCDC158Q5M9N0 1113 aa8.76□□□□□ -1.01
NEDD9-208ENST00000504387 GSPT2Q8IYD1 628 aaKnown RBP8.76□□□□□ -1.01
NEDD9-208ENST00000504387 FBXO18Q8NFZ0 1043 aa8.76□□□□□ -1.01
NEDD9-208ENST00000504387 STAMQ92783 540 aa8.76□□□□□ -1.01
NEDD9-208ENST00000504387 CDC5LQ99459 802 aaKnown RBP8.76□□□□□ -1.01
NEDD9-208ENST00000504387 RAI14Q9P0K7 980 aa8.76□□□□□ -1.01
NEDD9-208ENST00000504387 IMPACTQ9P2X3 320 aa8.76□□□□□ -1.01
NEDD9-208ENST00000504387 NPHP4O75161 1426 aaPredicted RBP8.75□□□□□ -1.01
NEDD9-208ENST00000504387 PREX1Q8TCU6 1659 aa8.75□□□□□ -1.01
NEDD9-208ENST00000504387 PRR29P0C7W0 189 aa8.75□□□□□ -1.01
NEDD9-208ENST00000504387 TTC31Q49AM3 519 aaPredicted RBP8.75□□□□□ -1.01
NEDD9-208ENST00000504387 ADALQ6DHV7 355 aa8.75□□□□□ -1.01
NEDD9-208ENST00000504387 OLFM4Q6UX06 510 aa8.75□□□□□ -1.01
NEDD9-208ENST00000504387 ANKRD24Q8TF21 1146 aa8.75□□□□□ -1.01
NEDD9-208ENST00000504387 GOLGA1Q92805 767 aa8.75□□□□□ -1.01
NEDD9-208ENST00000504387 TMEM131LA2VDJ0 1609 aa8.75□□□□□ -1.01
NEDD9-208ENST00000504387 MROH7-TTC4A0A0A0MT08 1334 aa8.75□□□□□ -1.01
NEDD9-208ENST00000504387 AGLP35573 1532 aa8.75□□□□□ -1.01
NEDD9-208ENST00000504387 ZSCAN12O43309 604 aa8.75□□□□□ -1.01
NEDD9-208ENST00000504387 KCTD19Q17RG1 926 aaPredicted RBP8.75□□□□□ -1.01
NEDD9-208ENST00000504387 MCMDC2Q4G0Z9 681 aa8.75□□□□□ -1.01
NEDD9-208ENST00000504387 HSP90B2PQ58FF3 399 aa8.75□□□□□ -1.01
NEDD9-208ENST00000504387 TAF7LQ5H9L4 462 aa8.75□□□□□ -1.01
NEDD9-208ENST00000504387 CNNM3Q8NE01 707 aa8.75□□□□□ -1.01
NEDD9-208ENST00000504387 CAPZA3Q96KX2 299 aa8.75□□□□□ -1.01
NEDD9-208ENST00000504387 SAMSN1Q9NSI8 373 aaKnown RBP8.75□□□□□ -1.01
NEDD9-208ENST00000504387 PCDHA5Q9Y5H7 936 aa8.75□□□□□ -1.01
NEDD9-208ENST00000504387 EIF3CLB5ME19 914 aaKnown RBP8.75□□□□□ -1.01
NEDD9-208ENST00000504387 E7EWF7 191 aa8.75□□□□□ -1.01
NEDD9-208ENST00000504387 ENC1O14682 589 aa8.75□□□□□ -1.01
NEDD9-208ENST00000504387 PFKFB2O60825 505 aa8.75□□□□□ -1.01
NEDD9-208ENST00000504387 A1BGP04217 495 aa8.75□□□□□ -1.01
NEDD9-208ENST00000504387 LIG3P49916 1009 aa8.75□□□□□ -1.01
NEDD9-208ENST00000504387 KRT32Q14532 448 aa8.75□□□□□ -1.01
NEDD9-208ENST00000504387 KSR2Q6VAB6 950 aa8.75□□□□□ -1.01
NEDD9-208ENST00000504387 SMYD4Q8IYR2 804 aaPredicted RBP8.75□□□□□ -1.01
NEDD9-208ENST00000504387 CMTR1Q8N1G2 835 aaKnown RBP8.75□□□□□ -1.01
NEDD9-208ENST00000504387 THEMISQ8N1K5 641 aaPredicted RBP8.75□□□□□ -1.01
NEDD9-208ENST00000504387 GOLGA6L1Q8N7Z2 621 aa8.75□□□□□ -1.01
NEDD9-208ENST00000504387 EEF2KMTQ96G04 330 aa8.75□□□□□ -1.01
NEDD9-208ENST00000504387 EIF3CQ99613 913 aaKnown RBP8.75□□□□□ -1.01
NEDD9-208ENST00000504387 JRKLQ9Y4A0 524 aa8.75□□□□□ -1.01
NEDD9-208ENST00000504387 A0A087WZG4 1122 aa8.74□□□□□ -1.01
NEDD9-208ENST00000504387 EPB41L2O43491 1005 aaKnown RBP8.74□□□□□ -1.01
NEDD9-208ENST00000504387 NOP2P46087 812 aaKnown RBP8.74□□□□□ -1.01
NEDD9-208ENST00000504387 MYL5Q02045 173 aa8.74□□□□□ -1.01
NEDD9-208ENST00000504387 NCAPH2Q6IBW4 605 aa8.74□□□□□ -1.01
NEDD9-208ENST00000504387 GPR161Q8N6U8 529 aaKnown RBP8.74□□□□□ -1.01
NEDD9-208ENST00000504387 GOLGA5Q8TBA6 731 aa8.74□□□□□ -1.01
NEDD9-208ENST00000504387 KCNB2Q92953 911 aa8.74□□□□□ -1.01
NEDD9-208ENST00000504387 ZNF594Q96JF6 807 aaPredicted RBP8.74□□□□□ -1.01
NEDD9-208ENST00000504387 TSPYL1Q9H0U9 437 aa8.74□□□□□ -1.01
NEDD9-208ENST00000504387 EHD4Q9H223 541 aa8.74□□□□□ -1.01
NEDD9-208ENST00000504387 HSD3B7Q9H2F3 369 aa8.74□□□□□ -1.01
NEDD9-208ENST00000504387 INCENPQ9NQS7 918 aa8.74□□□□□ -1.01
NEDD9-208ENST00000504387 NFE2L3Q9Y4A8 694 aa8.74□□□□□ -1.01
NEDD9-208ENST00000504387 TEX33O43247 280 aa8.74□□□□□ -1.01
NEDD9-208ENST00000504387 APPP05067 770 aa8.74□□□□□ -1.01
NEDD9-208ENST00000504387 VSNL1P62760 191 aa8.74□□□□□ -1.01
NEDD9-208ENST00000504387 MYSM1Q5VVJ2 828 aa8.74□□□□□ -1.01
NEDD9-208ENST00000504387 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.74□□□□□ -1.01
NEDD9-208ENST00000504387 MICU3Q86XE3 530 aa8.74□□□□□ -1.01
NEDD9-208ENST00000504387 FOXP4Q8IVH2 680 aaPredicted RBP8.74□□□□□ -1.01
NEDD9-208ENST00000504387 ACRBPQ8NEB7 543 aa8.74□□□□□ -1.01
NEDD9-208ENST00000504387 INTS13Q9NVM9 706 aa8.74□□□□□ -1.01
NEDD9-208ENST00000504387 HMG20BQ9P0W2 317 aa8.74□□□□□ -1.01
NEDD9-208ENST00000504387 ARHGEF10O15013 1369 aa8.74□□□□□ -1.01
NEDD9-208ENST00000504387 CARMIL3Q8ND23 1372 aa8.74□□□□□ -1.01
NEDD9-208ENST00000504387 PHLPP2Q6ZVD8 1323 aa8.73□□□□□ -1.01
NEDD9-208ENST00000504387 RNMTO43148 476 aaKnown RBP8.73□□□□□ -1.01
NEDD9-208ENST00000504387 CDC25AP30304 524 aa8.73□□□□□ -1.01
NEDD9-208ENST00000504387 AFMP43652 599 aa8.73□□□□□ -1.01
NEDD9-208ENST00000504387 GRIN1Q05586 938 aa8.73□□□□□ -1.01
NEDD9-208ENST00000504387 ANO1Q5XXA6 986 aa8.73□□□□□ -1.01
NEDD9-208ENST00000504387 ZBTB3Q9H5J0 574 aa8.73□□□□□ -1.01
NEDD9-208ENST00000504387 FAM204AQ9H8W3 233 aa8.73□□□□□ -1.01
NEDD9-208ENST00000504387 AKAP2Q9Y2D5 859 aa8.73□□□□□ -1.01
NEDD9-208ENST00000504387 U3KPZ7 1027 aaPredicted RBP8.73□□□□□ -1.01
NEDD9-208ENST00000504387 CLTCQ00610 1675 aaKnown RBP8.73□□□□□ -1.01
NEDD9-208ENST00000504387 CEP170BQ9Y4F5 1589 aaPredicted RBP8.73□□□□□ -1.01
NEDD9-208ENST00000504387 ADRA2BP18089 450 aa8.73□□□□□ -1.01
NEDD9-208ENST00000504387 TXLNAP40222 546 aa8.73□□□□□ -1.01
NEDD9-208ENST00000504387 CCT6AP40227 531 aaKnown RBP8.73□□□□□ -1.01
NEDD9-208ENST00000504387 MAP3K9P80192 1104 aa8.73□□□□□ -1.01
NEDD9-208ENST00000504387 FMR1Q06787 632 aaKnown RBP eCLIP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms