RNA–Protein interactions for RNA: ENST00000504224.5

RNF4-205, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-205ENST00000504224 IGF2BP3O00425 579 aaKnown RBP eCLIP26.99■■□□□ 1.91
RNF4-205ENST00000504224 KLHDC4Q8TBB5 520 aa26.99■■□□□ 1.91
RNF4-205ENST00000504224 PDE8BO95263 885 aa26.98■■□□□ 1.91
RNF4-205ENST00000504224 GJA5P36382 358 aa26.98■■□□□ 1.91
RNF4-205ENST00000504224 GRIK5Q16478 980 aa26.98■■□□□ 1.91
RNF4-205ENST00000504224 ELP3Q9H9T3 547 aa26.98■■□□□ 1.91
RNF4-205ENST00000504224 TNNI2P48788 182 aa26.97■■□□□ 1.91
RNF4-205ENST00000504224 OTUD7BQ6GQQ9 843 aa26.97■■□□□ 1.91
RNF4-205ENST00000504224 TBC1D22AQ8WUA7 517 aa26.97■■□□□ 1.91
RNF4-205ENST00000504224 TMEM39BQ9GZU3 492 aa26.97■■□□□ 1.91
RNF4-205ENST00000504224 CDAN1Q8IWY9 1227 aa26.96■■□□□ 1.91
RNF4-205ENST00000504224 USP44Q9H0E7 712 aa26.96■■□□□ 1.91
RNF4-205ENST00000504224 BCAMP50895 628 aa26.95■■□□□ 1.9
RNF4-205ENST00000504224 VGLL2Q8N8G2 317 aa26.95■■□□□ 1.9
RNF4-205ENST00000504224 OPTNQ96CV9 577 aa26.95■■□□□ 1.9
RNF4-205ENST00000504224 TRIM17Q9Y577 477 aa26.95■■□□□ 1.9
RNF4-205ENST00000504224 TEKT1Q969V4 418 aa26.94■■□□□ 1.9
RNF4-205ENST00000504224 TEPSINQ96N21 525 aa26.94■■□□□ 1.9
RNF4-205ENST00000504224 CCER2I3L3R5 266 aa26.93■■□□□ 1.9
RNF4-205ENST00000504224 SLC34A2O95436 690 aa26.93■■□□□ 1.9
RNF4-205ENST00000504224 IFIT1P09914 478 aaKnown RBP26.93■■□□□ 1.9
RNF4-205ENST00000504224 CACNB3P54284 484 aa26.93■■□□□ 1.9
RNF4-205ENST00000504224 SLFN5Q08AF3 891 aa26.93■■□□□ 1.9
RNF4-205ENST00000504224 ARAP2Q8WZ64 1704 aa26.93■■□□□ 1.9
RNF4-205ENST00000504224 HDLBPQ00341 1268 aaKnown RBP26.92■■□□□ 1.9
RNF4-205ENST00000504224 CRHR2Q13324 411 aa26.92■■□□□ 1.9
RNF4-205ENST00000504224 PUM3Q15397 648 aaKnown RBP26.92■■□□□ 1.9
RNF4-205ENST00000504224 SMC4Q9NTJ3 1288 aa26.92■■□□□ 1.9
RNF4-205ENST00000504224 TMOD2Q9NZR1 351 aa26.92■■□□□ 1.9
RNF4-205ENST00000504224 TNRC18O15417 2968 aaPredicted RBP26.91■■□□□ 1.9
RNF4-205ENST00000504224 MAP3K9P80192 1104 aa26.91■■□□□ 1.9
RNF4-205ENST00000504224 OTOP1Q7RTM1 612 aa26.91■■□□□ 1.9
RNF4-205ENST00000504224 CSADQ9Y600 493 aa26.91■■□□□ 1.9
RNF4-205ENST00000504224 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.9■■□□□ 1.9
RNF4-205ENST00000504224 CD99L2Q8TCZ2 262 aa26.9■■□□□ 1.9
RNF4-205ENST00000504224 CNKSR2Q8WXI2 1034 aa26.9■■□□□ 1.9
RNF4-205ENST00000504224 ERO1AQ96HE7 468 aa26.9■■□□□ 1.9
RNF4-205ENST00000504224 PTPN18Q99952 460 aa26.9■■□□□ 1.9
RNF4-205ENST00000504224 EYA2O00167 538 aa26.89■■□□□ 1.9
RNF4-205ENST00000504224 SLC5A1P13866 664 aa26.89■■□□□ 1.9
RNF4-205ENST00000504224 VGLL4Q14135 290 aa26.89■■□□□ 1.9
RNF4-205ENST00000504224 ALDH1L2Q3SY69 923 aa26.89■■□□□ 1.9
RNF4-205ENST00000504224 CDCA7LQ96GN5 454 aa26.89■■□□□ 1.9
RNF4-205ENST00000504224 TESPA1A2RU30 521 aaPredicted RBP26.88■■□□□ 1.89
RNF4-205ENST00000504224 FGFR2P21802 821 aa26.88■■□□□ 1.89
RNF4-205ENST00000504224 ZDHHC15Q96MV8 337 aa26.88■■□□□ 1.89
RNF4-205ENST00000504224 MAST3O60307 1309 aa26.88■■□□□ 1.89
RNF4-205ENST00000504224 RFX5P48382 616 aaPredicted RBP26.87■■□□□ 1.89
RNF4-205ENST00000504224 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.87■■□□□ 1.89
RNF4-205ENST00000504224 OTUD5Q96G74 571 aa26.87■■□□□ 1.89
RNF4-205ENST00000504224 KIF16BQ96L93 1317 aa26.87■■□□□ 1.89
RNF4-205ENST00000504224 OTOFQ9HC10 1997 aa26.86■■□□□ 1.89
RNF4-205ENST00000504224 CCL15-CCL14A0A0B4J2E2 113 aa26.86■■□□□ 1.89
RNF4-205ENST00000504224 SP3Q02447 781 aa26.86■■□□□ 1.89
RNF4-205ENST00000504224 CCL15Q16663 113 aa26.86■■□□□ 1.89
RNF4-205ENST00000504224 LPIN2Q92539 896 aa26.86■■□□□ 1.89
RNF4-205ENST00000504224 MS4A4AQ96JQ5 239 aa26.86■■□□□ 1.89
RNF4-205ENST00000504224 SUGT1Q9Y2Z0 365 aa26.86■■□□□ 1.89
RNF4-205ENST00000504224 UBTFL1P0CB47 393 aaPredicted RBP26.85■■□□□ 1.89
RNF4-205ENST00000504224 GTF2A2P52657 109 aa26.85■■□□□ 1.89
RNF4-205ENST00000504224 APOBEC3HQ6NTF7 200 aaKnown RBP26.85■■□□□ 1.89
RNF4-205ENST00000504224 BRI3BPQ8WY22 251 aa26.85■■□□□ 1.89
RNF4-205ENST00000504224 MRIQ9BWK5 157 aa26.85■■□□□ 1.89
RNF4-205ENST00000504224 SIL1Q9H173 461 aa26.85■■□□□ 1.89
RNF4-205ENST00000504224 TAF1CQ15572 869 aaPredicted RBP26.84■■□□□ 1.89
RNF4-205ENST00000504224 WDR66Q8TBY9 1149 aa26.84■■□□□ 1.89
RNF4-205ENST00000504224 EFCC1Q9HA90 598 aa26.84■■□□□ 1.89
RNF4-205ENST00000504224 FAM83AQ86UY5 434 aa26.83■■□□□ 1.89
RNF4-205ENST00000504224 HOOK2Q96ED9 719 aa26.83■■□□□ 1.89
RNF4-205ENST00000504224 WRNIP1Q96S55 665 aa26.83■■□□□ 1.89
RNF4-205ENST00000504224 ZFYVE28Q9HCC9 887 aa26.83■■□□□ 1.89
RNF4-205ENST00000504224 LAMB1P07942 1786 aa26.83■■□□□ 1.89
RNF4-205ENST00000504224 PRPF38BQ5VTL8 546 aaKnown RBP26.82■■□□□ 1.88
RNF4-205ENST00000504224 HHIPL2Q6UWX4 724 aa26.82■■□□□ 1.88
RNF4-205ENST00000504224 ATG9AQ7Z3C6 839 aa26.82■■□□□ 1.88
RNF4-205ENST00000504224 NOB1Q9ULX3 412 aaKnown RBP26.82■■□□□ 1.88
RNF4-205ENST00000504224 PTPN22Q9Y2R2 807 aa26.82■■□□□ 1.88
RNF4-205ENST00000504224 PDE4DIPQ5VU43 2346 aa26.81■■□□□ 1.88
RNF4-205ENST00000504224 SPDYE5A6NIY4 337 aa26.81■■□□□ 1.88
RNF4-205ENST00000504224 FKBP1CQ5VVH2 108 aa26.81■■□□□ 1.88
RNF4-205ENST00000504224 ZKSCAN4Q969J2 545 aaPredicted RBP26.81■■□□□ 1.88
RNF4-205ENST00000504224 CEP126Q9P2H0 1117 aa26.81■■□□□ 1.88
RNF4-205ENST00000504224 ATP2B3Q16720 1220 aa26.8■■□□□ 1.88
RNF4-205ENST00000504224 DCAF15Q66K64 600 aa26.8■■□□□ 1.88
RNF4-205ENST00000504224 INTS3Q68E01 1043 aaKnown RBP26.8■■□□□ 1.88
RNF4-205ENST00000504224 GNL3LQ9NVN8 582 aaKnown RBP26.8■■□□□ 1.88
RNF4-205ENST00000504224 SNCAIPQ9Y6H5 919 aa26.8■■□□□ 1.88
RNF4-205ENST00000504224 DIEXFQ68CQ4 756 aaKnown RBP26.79■■□□□ 1.88
RNF4-205ENST00000504224 ERO1BQ86YB8 467 aa26.79■■□□□ 1.88
RNF4-205ENST00000504224 FAM43AQ8N2R8 423 aa26.79■■□□□ 1.88
RNF4-205ENST00000504224 WDHD1O75717 1129 aaPredicted RBP26.78■■□□□ 1.88
RNF4-205ENST00000504224 MIGA2Q7L4E1 593 aa26.78■■□□□ 1.88
RNF4-205ENST00000504224 API5Q9BZZ5 524 aaKnown RBP26.78■■□□□ 1.88
RNF4-205ENST00000504224 LRRFIP2Q9Y608 721 aaKnown RBP26.78■■□□□ 1.88
RNF4-205ENST00000504224 CIAO1O76071 339 aa26.77■■□□□ 1.88
RNF4-205ENST00000504224 CETPP11597 493 aa26.77■■□□□ 1.88
RNF4-205ENST00000504224 CAP1Q01518 475 aa26.77■■□□□ 1.88
RNF4-205ENST00000504224 TCP10Q12799 353 aa26.77■■□□□ 1.88
RNF4-205ENST00000504224 ARHGEF6Q15052 776 aa26.77■■□□□ 1.88
RNF4-205ENST00000504224 DIXDC1Q155Q3 683 aa26.77■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms