RNA–Protein interactions for RNA: ENST00000503842.5

PRDM2-213, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-213ENST00000503842 LTBP3Q9NS15 1303 aa16.17■□□□□ 0.18
PRDM2-213ENST00000503842 RFX7Q2KHR2 1363 aa16.16■□□□□ 0.18
PRDM2-213ENST00000503842 CHD4Q14839 1912 aa16.16■□□□□ 0.18
PRDM2-213ENST00000503842 CDC45O75419 566 aa16.16■□□□□ 0.18
PRDM2-213ENST00000503842 IER5LQ5T953 404 aa16.16■□□□□ 0.18
PRDM2-213ENST00000503842 TAOK3Q9H2K8 898 aa16.16■□□□□ 0.18
PRDM2-213ENST00000503842 PPIP5K2O43314 1243 aa16.15■□□□□ 0.18
PRDM2-213ENST00000503842 TTF1Q15361 905 aaPredicted RBP16.15■□□□□ 0.18
PRDM2-213ENST00000503842 AOC3Q16853 763 aa16.15■□□□□ 0.18
PRDM2-213ENST00000503842 TICAM2Q86XR7 235 aa16.15■□□□□ 0.18
PRDM2-213ENST00000503842 FSD1Q9BTV5 496 aa16.15■□□□□ 0.18
PRDM2-213ENST00000503842 PIH1D3Q9NQM4 214 aaKnown RBP16.15■□□□□ 0.18
PRDM2-213ENST00000503842 ZNF277Q9NRM2 450 aaPredicted RBP16.15■□□□□ 0.18
PRDM2-213ENST00000503842 FAM205AQ6ZU69 1335 aa16.15■□□□□ 0.18
PRDM2-213ENST00000503842 FRAT2O75474 233 aaPredicted RBP16.14■□□□□ 0.17
PRDM2-213ENST00000503842 CHMLP26374 656 aa16.14■□□□□ 0.17
PRDM2-213ENST00000503842 CHAF1AQ13111 956 aaPredicted RBP16.14■□□□□ 0.17
PRDM2-213ENST00000503842 DOK7Q18PE1 504 aa16.14■□□□□ 0.17
PRDM2-213ENST00000503842 TBC1D9Q6ZT07 1266 aa16.14■□□□□ 0.17
PRDM2-213ENST00000503842 PODNQ7Z5L7 613 aa16.14■□□□□ 0.17
PRDM2-213ENST00000503842 RYDENQ9NUL5 291 aaKnown RBP16.14■□□□□ 0.17
PRDM2-213ENST00000503842 DOCK2Q92608 1830 aa16.14■□□□□ 0.17
PRDM2-213ENST00000503842 SALL1Q9NSC2 1324 aa16.14■□□□□ 0.17
PRDM2-213ENST00000503842 ECE2O60344 883 aa16.13■□□□□ 0.17
PRDM2-213ENST00000503842 C7P10643 843 aa16.13■□□□□ 0.17
PRDM2-213ENST00000503842 PLCG2P16885 1265 aa16.13■□□□□ 0.17
PRDM2-213ENST00000503842 IARSP41252 1262 aaKnown RBP16.13■□□□□ 0.17
PRDM2-213ENST00000503842 WDR66Q8TBY9 1149 aa16.13■□□□□ 0.17
PRDM2-213ENST00000503842 DBNDD1Q9H9R9 158 aa16.13■□□□□ 0.17
PRDM2-213ENST00000503842 METRNQ9UJH8 293 aa16.13■□□□□ 0.17
PRDM2-213ENST00000503842 COL4A5P29400 1685 aa16.13■□□□□ 0.17
PRDM2-213ENST00000503842 MYO5AQ9Y4I1 1855 aaKnown RBP16.13■□□□□ 0.17
PRDM2-213ENST00000503842 LARGE2Q8N3Y3 721 aa16.12■□□□□ 0.17
PRDM2-213ENST00000503842 SCN9AQ15858 1988 aa16.12■□□□□ 0.17
PRDM2-213ENST00000503842 MYH7P12883 1935 aa16.11■□□□□ 0.17
PRDM2-213ENST00000503842 G3V3G9 751 aa16.11■□□□□ 0.17
PRDM2-213ENST00000503842 HIP1O00291 1037 aa16.11■□□□□ 0.17
PRDM2-213ENST00000503842 YBX3P16989 372 aaKnown RBP eCLIP16.11■□□□□ 0.17
PRDM2-213ENST00000503842 RASSF7Q02833 373 aa16.11■□□□□ 0.17
PRDM2-213ENST00000503842 BACH2Q9BYV9 841 aa16.11■□□□□ 0.17
PRDM2-213ENST00000503842 JAG2Q9Y219 1238 aa16.11■□□□□ 0.17
PRDM2-213ENST00000503842 YDJCA8MPS7 323 aa16.1■□□□□ 0.17
PRDM2-213ENST00000503842 RNF113AO15541 343 aaKnown RBP16.1■□□□□ 0.17
PRDM2-213ENST00000503842 IGSF3O75054 1194 aa16.1■□□□□ 0.17
PRDM2-213ENST00000503842 IDH1O75874 414 aaKnown RBP16.1■□□□□ 0.17
PRDM2-213ENST00000503842 PRELPP51888 382 aa16.1■□□□□ 0.17
PRDM2-213ENST00000503842 GTF2IP78347 998 aa16.1■□□□□ 0.17
PRDM2-213ENST00000503842 LRRFIP1Q32MZ4 808 aaKnown RBP16.1■□□□□ 0.17
PRDM2-213ENST00000503842 PAXIP1Q6ZW49 1069 aaPredicted RBP16.1■□□□□ 0.17
PRDM2-213ENST00000503842 ZGPATQ8N5A5 531 aaKnown RBP16.1■□□□□ 0.17
PRDM2-213ENST00000503842 TBC1D22AQ8WUA7 517 aa16.1■□□□□ 0.17
PRDM2-213ENST00000503842 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.1■□□□□ 0.17
PRDM2-213ENST00000503842 DIAPH3Q9NSV4 1193 aa16.1■□□□□ 0.17
PRDM2-213ENST00000503842 ZNF646O15015 1829 aaPredicted RBP16.1■□□□□ 0.17
PRDM2-213ENST00000503842 CHGBP05060 677 aa16.09■□□□□ 0.17
PRDM2-213ENST00000503842 ZFYP08048 801 aaPredicted RBP16.09■□□□□ 0.17
PRDM2-213ENST00000503842 PDE6AP16499 860 aa16.09■□□□□ 0.17
PRDM2-213ENST00000503842 ADD2P35612 726 aa16.09■□□□□ 0.17
PRDM2-213ENST00000503842 MAP3K12Q12852 859 aa16.09■□□□□ 0.17
PRDM2-213ENST00000503842 NMIQ13287 307 aaPredicted RBP16.09■□□□□ 0.17
PRDM2-213ENST00000503842 ZMYM1Q5SVZ6 1142 aa16.09■□□□□ 0.17
PRDM2-213ENST00000503842 CASC1Q6TDU7 716 aa16.09■□□□□ 0.17
PRDM2-213ENST00000503842 NIM1KQ8IY84 436 aa16.09■□□□□ 0.17
PRDM2-213ENST00000503842 SPRYD3Q8NCJ5 442 aa16.09■□□□□ 0.17
PRDM2-213ENST00000503842 MFRPQ9BY79 579 aa16.09■□□□□ 0.17
PRDM2-213ENST00000503842 ABCF2Q9UG63 623 aa16.09■□□□□ 0.17
PRDM2-213ENST00000503842 PSME4Q14997 1843 aa16.09■□□□□ 0.17
PRDM2-213ENST00000503842 TCRBV5S4A2TA0A5A2 114 aa16.08■□□□□ 0.16
PRDM2-213ENST00000503842 FKBP1AP62942 108 aaKnown RBP16.08■□□□□ 0.16
PRDM2-213ENST00000503842 UBE3CQ15386 1083 aa16.08■□□□□ 0.16
PRDM2-213ENST00000503842 MFSD14BQ5SR56 506 aa16.08■□□□□ 0.16
PRDM2-213ENST00000503842 DACT2Q5SW24 774 aa16.08■□□□□ 0.16
PRDM2-213ENST00000503842 STRIP1Q5VSL9 837 aa16.08■□□□□ 0.16
PRDM2-213ENST00000503842 SPTY2D1Q68D10 685 aaPredicted RBP16.08■□□□□ 0.16
PRDM2-213ENST00000503842 TTLL5Q6EMB2 1281 aa16.08■□□□□ 0.16
PRDM2-213ENST00000503842 ZSCAN25Q6NSZ9 544 aa16.08■□□□□ 0.16
PRDM2-213ENST00000503842 ARHGAP27Q6ZUM4 889 aa16.08■□□□□ 0.16
PRDM2-213ENST00000503842 ERICH6Q7L0X2 663 aa16.08■□□□□ 0.16
PRDM2-213ENST00000503842 FAM227BQ96M60 508 aa16.08■□□□□ 0.16
PRDM2-213ENST00000503842 ESYT1Q9BSJ8 1104 aa16.08■□□□□ 0.16
PRDM2-213ENST00000503842 IL25Q9H293 177 aa16.08■□□□□ 0.16
PRDM2-213ENST00000503842 KCNQ5Q9NR82 932 aa16.08■□□□□ 0.16
PRDM2-213ENST00000503842 LRP2BPQ9P2M1 347 aa16.08■□□□□ 0.16
PRDM2-213ENST00000503842 ZNRF3Q9ULT6 936 aa16.08■□□□□ 0.16
PRDM2-213ENST00000503842 A0A0D9SFI3 127 aa16.07■□□□□ 0.16
PRDM2-213ENST00000503842 USP17L3A6NCW0 530 aa16.07■□□□□ 0.16
PRDM2-213ENST00000503842 USP17L4A6NCW7 530 aa16.07■□□□□ 0.16
PRDM2-213ENST00000503842 SGSM2O43147 1006 aa16.07■□□□□ 0.16
PRDM2-213ENST00000503842 PRDX5P30044 214 aa16.07■□□□□ 0.16
PRDM2-213ENST00000503842 GRIK5Q16478 980 aa16.07■□□□□ 0.16
PRDM2-213ENST00000503842 SLFNL1Q499Z3 407 aa16.07■□□□□ 0.16
PRDM2-213ENST00000503842 SLC9C2Q5TAH2 1124 aa16.07■□□□□ 0.16
PRDM2-213ENST00000503842 TMED8Q6PL24 325 aaPredicted RBP16.07■□□□□ 0.16
PRDM2-213ENST00000503842 CWC27Q6UX04 472 aaKnown RBP16.07■□□□□ 0.16
PRDM2-213ENST00000503842 USP17L1Q7RTZ2 530 aa16.07■□□□□ 0.16
PRDM2-213ENST00000503842 CERS5Q8N5B7 392 aa16.07■□□□□ 0.16
PRDM2-213ENST00000503842 ZNF384Q8TF68 577 aa16.07■□□□□ 0.16
PRDM2-213ENST00000503842 APPBP2Q92624 585 aa16.07■□□□□ 0.16
PRDM2-213ENST00000503842 OCEL1Q9H607 264 aa16.07■□□□□ 0.16
PRDM2-213ENST00000503842 RAI14Q9P0K7 980 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms