RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 PSMD14O00487 310 aa24.44■■□□□ 1.5
CTSD-206ENST00000497544 ZBTB22O15209 634 aa24.44■■□□□ 1.5
CTSD-206ENST00000497544 OTUD7AQ8TE49 926 aaPredicted RBP24.44■■□□□ 1.5
CTSD-206ENST00000497544 JAG2Q9Y219 1238 aa24.44■■□□□ 1.5
CTSD-206ENST00000497544 MYH13Q9UKX3 1938 aa24.43■■□□□ 1.5
CTSD-206ENST00000497544 VIL1P09327 827 aaKnown RBP24.43■■□□□ 1.5
CTSD-206ENST00000497544 RASGRF1Q13972 1273 aa24.43■■□□□ 1.5
CTSD-206ENST00000497544 WDR66Q8TBY9 1149 aa24.43■■□□□ 1.5
CTSD-206ENST00000497544 HMG20BQ9P0W2 317 aa24.43■■□□□ 1.5
CTSD-206ENST00000497544 ATP5JP18859 108 aa24.42■■□□□ 1.5
CTSD-206ENST00000497544 MX1P20591 662 aa24.42■■□□□ 1.5
CTSD-206ENST00000497544 MCAMP43121 646 aa24.42■■□□□ 1.5
CTSD-206ENST00000497544 GPC2Q8N158 579 aa24.42■■□□□ 1.5
CTSD-206ENST00000497544 SPATA5Q8NB90 893 aa24.42■■□□□ 1.5
CTSD-206ENST00000497544 TBC1D22AQ8WUA7 517 aa24.42■■□□□ 1.5
CTSD-206ENST00000497544 SNRKQ9NRH2 765 aa24.42■■□□□ 1.5
CTSD-206ENST00000497544 TTC41PQ6P2S7 1318 aa24.41■■□□□ 1.5
CTSD-206ENST00000497544 ERC2O15083 957 aa24.41■■□□□ 1.5
CTSD-206ENST00000497544 SCARF1Q14162 830 aa24.41■■□□□ 1.5
CTSD-206ENST00000497544 RSBN1LQ6PCB5 846 aaPredicted RBP24.41■■□□□ 1.5
CTSD-206ENST00000497544 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.41■■□□□ 1.5
CTSD-206ENST00000497544 BOLA2Q9H3K6 86 aa24.41■■□□□ 1.5
CTSD-206ENST00000497544 GTF3C3Q9Y5Q9 886 aa24.41■■□□□ 1.5
CTSD-206ENST00000497544 MFSD14BQ5SR56 506 aa24.4■■□□□ 1.5
CTSD-206ENST00000497544 DACT2Q5SW24 774 aa24.4■■□□□ 1.5
CTSD-206ENST00000497544 PDE1AP54750 535 aa24.39■■□□□ 1.49
CTSD-206ENST00000497544 FKBP1AP62942 108 aaKnown RBP24.39■■□□□ 1.49
CTSD-206ENST00000497544 SAPCD2Q86UD0 394 aa24.39■■□□□ 1.49
CTSD-206ENST00000497544 PLEKHM2Q8IWE5 1019 aa24.39■■□□□ 1.49
CTSD-206ENST00000497544 MXD3Q9BW11 206 aa24.39■■□□□ 1.49
CTSD-206ENST00000497544 STAP2Q9UGK3 403 aa24.39■■□□□ 1.49
CTSD-206ENST00000497544 ZBTB12Q9Y330 459 aaPredicted RBP24.39■■□□□ 1.49
CTSD-206ENST00000497544 PSME4Q14997 1843 aa24.39■■□□□ 1.49
CTSD-206ENST00000497544 PDS5AQ29RF7 1337 aaKnown RBP24.38■■□□□ 1.49
CTSD-206ENST00000497544 MYO3BQ8WXR4 1341 aa24.38■■□□□ 1.49
CTSD-206ENST00000497544 SALL3Q9BXA9 1300 aa24.38■■□□□ 1.49
CTSD-206ENST00000497544 GLRX3O76003 335 aaKnown RBP24.38■■□□□ 1.49
CTSD-206ENST00000497544 ZAP70P43403 619 aa24.38■■□□□ 1.49
CTSD-206ENST00000497544 TSHZ3Q63HK5 1081 aa24.38■■□□□ 1.49
CTSD-206ENST00000497544 PI16Q6UXB8 463 aa24.38■■□□□ 1.49
CTSD-206ENST00000497544 ZGPATQ8N5A5 531 aaKnown RBP24.38■■□□□ 1.49
CTSD-206ENST00000497544 AGBL3Q8NEM8 1001 aa24.38■■□□□ 1.49
CTSD-206ENST00000497544 AKAP11Q9UKA4 1901 aa24.37■■□□□ 1.49
CTSD-206ENST00000497544 RPS12P25398 132 aaKnown RBP24.37■■□□□ 1.49
CTSD-206ENST00000497544 PDE4AP27815 886 aa24.37■■□□□ 1.49
CTSD-206ENST00000497544 DNAJC2Q99543 621 aaKnown RBP24.37■■□□□ 1.49
CTSD-206ENST00000497544 ABCF2Q9UG63 623 aa24.37■■□□□ 1.49
CTSD-206ENST00000497544 GMPSP49915 693 aaPredicted RBP24.36■■□□□ 1.49
CTSD-206ENST00000497544 SPTY2D1Q68D10 685 aaPredicted RBP24.36■■□□□ 1.49
CTSD-206ENST00000497544 HAUS7Q99871 368 aa24.36■■□□□ 1.49
CTSD-206ENST00000497544 SALL1Q9NSC2 1324 aa24.35■■□□□ 1.49
CTSD-206ENST00000497544 CERS5Q8N5B7 392 aa24.35■■□□□ 1.49
CTSD-206ENST00000497544 DPF2Q92785 391 aa24.35■■□□□ 1.49
CTSD-206ENST00000497544 SUGT1Q9Y2Z0 365 aa24.35■■□□□ 1.49
CTSD-206ENST00000497544 COL1A1P02452 1464 aaPredicted RBP24.34■■□□□ 1.49
CTSD-206ENST00000497544 F8W031 263 aaPredicted RBP24.34■■□□□ 1.49
CTSD-206ENST00000497544 CYP2E1P05181 493 aaPredicted RBP24.34■■□□□ 1.49
CTSD-206ENST00000497544 LDHBP07195 334 aaKnown RBP24.34■■□□□ 1.49
CTSD-206ENST00000497544 LMOD1P29536 600 aaPredicted RBP24.34■■□□□ 1.49
CTSD-206ENST00000497544 EPS15P42566 896 aa24.34■■□□□ 1.49
CTSD-206ENST00000497544 TTF1Q15361 905 aaPredicted RBP24.34■■□□□ 1.49
CTSD-206ENST00000497544 TBC1D9Q6ZT07 1266 aa24.34■■□□□ 1.49
CTSD-206ENST00000497544 ERICH6Q7L0X2 663 aa24.34■■□□□ 1.49
CTSD-206ENST00000497544 KIAA0825Q8IV33 1275 aa24.34■■□□□ 1.49
CTSD-206ENST00000497544 PI4K2BQ8TCG2 481 aa24.34■■□□□ 1.49
CTSD-206ENST00000497544 ZIC5Q96T25 663 aa24.34■■□□□ 1.49
CTSD-206ENST00000497544 GMLQ99445 158 aa24.34■■□□□ 1.49
CTSD-206ENST00000497544 OSBPL3Q9H4L5 887 aa24.34■■□□□ 1.49
CTSD-206ENST00000497544 LRP2BPQ9P2M1 347 aa24.34■■□□□ 1.49
CTSD-206ENST00000497544 NDUFB9Q9Y6M9 179 aa24.34■■□□□ 1.49
CTSD-206ENST00000497544 AOX1Q06278 1338 aa24.34■■□□□ 1.49
CTSD-206ENST00000497544 H7C1D1 291 aa24.33■■□□□ 1.49
CTSD-206ENST00000497544 GOLIM4O00461 696 aa24.33■■□□□ 1.49
CTSD-206ENST00000497544 OGFOD1Q8N543 542 aa24.33■■□□□ 1.49
CTSD-206ENST00000497544 HHIPL1Q96JK4 782 aa24.33■■□□□ 1.49
CTSD-206ENST00000497544 PAG1Q9NWQ8 432 aa24.33■■□□□ 1.49
CTSD-206ENST00000497544 CNOT7Q9UIV1 285 aaKnown RBP24.33■■□□□ 1.49
CTSD-206ENST00000497544 HDAC9Q9UKV0 1011 aa24.33■■□□□ 1.49
CTSD-206ENST00000497544 USP17L8P0C7I0 530 aa24.32■■□□□ 1.48
CTSD-206ENST00000497544 SCNN1DP51172 638 aa24.32■■□□□ 1.48
CTSD-206ENST00000497544 HABP4Q5JVS0 413 aaKnown RBP24.32■■□□□ 1.48
CTSD-206ENST00000497544 TTF2Q9UNY4 1162 aaKnown RBP24.32■■□□□ 1.48
CTSD-206ENST00000497544 CELF2O95319 508 aaKnown RBP24.31■■□□□ 1.48
CTSD-206ENST00000497544 PRDX5P30044 214 aa24.31■■□□□ 1.48
CTSD-206ENST00000497544 ANTXR1Q9H6X2 564 aa24.31■■□□□ 1.48
CTSD-206ENST00000497544 GPRC5DQ9NZD1 345 aa24.31■■□□□ 1.48
CTSD-206ENST00000497544 RAI14Q9P0K7 980 aa24.31■■□□□ 1.48
CTSD-206ENST00000497544 MMP14P50281 582 aa24.3■■□□□ 1.48
CTSD-206ENST00000497544 GRIK5Q16478 980 aa24.3■■□□□ 1.48
CTSD-206ENST00000497544 MICALL2Q8IY33 904 aa24.3■■□□□ 1.48
CTSD-206ENST00000497544 EDC3Q96F86 508 aaKnown RBP24.3■■□□□ 1.48
CTSD-206ENST00000497544 PIH1D3Q9NQM4 214 aaKnown RBP24.3■■□□□ 1.48
CTSD-206ENST00000497544 ZNF646O15015 1829 aaPredicted RBP24.3■■□□□ 1.48
CTSD-206ENST00000497544 MAST3O60307 1309 aa24.3■■□□□ 1.48
CTSD-206ENST00000497544 IDH1O75874 414 aaKnown RBP24.29■■□□□ 1.48
CTSD-206ENST00000497544 MAP4K4O95819 1239 aaPredicted RBP24.29■■□□□ 1.48
CTSD-206ENST00000497544 RGS3P49796 1198 aa24.29■■□□□ 1.48
CTSD-206ENST00000497544 USP50Q70EL3 339 aaPredicted RBP24.29■■□□□ 1.48
CTSD-206ENST00000497544 MAP3K12Q12852 859 aa24.28■■□□□ 1.48
CTSD-206ENST00000497544 SKAP1Q86WV1 359 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms