RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 RLBP1P12271 317 aa7.85□□□□□ -1.15
VPS36-206ENST00000497149 GSTM4Q03013 218 aa7.85□□□□□ -1.15
VPS36-206ENST00000497149 BEND7Q8N7W2 519 aaPredicted RBP7.85□□□□□ -1.15
VPS36-206ENST00000497149 KLHL23Q8NBE8 558 aa7.85□□□□□ -1.15
VPS36-206ENST00000497149 KLHDC7BQ96G42 594 aa7.85□□□□□ -1.15
VPS36-206ENST00000497149 RSRP1Q9BUV0 290 aa7.85□□□□□ -1.15
VPS36-206ENST00000497149 CARD10Q9BWT7 1032 aa7.85□□□□□ -1.15
VPS36-206ENST00000497149 SRA1Q9HD15 236 aaKnown RBP7.85□□□□□ -1.15
VPS36-206ENST00000497149 A0A0A0MRY4 1105 aa7.84□□□□□ -1.15
VPS36-206ENST00000497149 PIK3R2O00459 728 aa7.84□□□□□ -1.15
VPS36-206ENST00000497149 EIF4EBP3O60516 100 aaPredicted RBP7.84□□□□□ -1.15
VPS36-206ENST00000497149 BMP6P22004 513 aa7.84□□□□□ -1.15
VPS36-206ENST00000497149 PODNQ7Z5L7 613 aa7.84□□□□□ -1.15
VPS36-206ENST00000497149 ALYREFQ86V81 257 aaKnown RBP7.84□□□□□ -1.15
VPS36-206ENST00000497149 GALNT11Q8NCW6 608 aa7.84□□□□□ -1.15
VPS36-206ENST00000497149 COPRSQ9NQ92 184 aa7.84□□□□□ -1.15
VPS36-206ENST00000497149 CNTNAP5Q8WYK1 1306 aa7.83□□□□□ -1.16
VPS36-206ENST00000497149 NME2P22392 152 aa7.83□□□□□ -1.16
VPS36-206ENST00000497149 ARNTP27540 789 aa7.83□□□□□ -1.16
VPS36-206ENST00000497149 ERCC5P28715 1186 aaPredicted RBP7.83□□□□□ -1.16
VPS36-206ENST00000497149 SUZ12Q15022 739 aaKnown RBP7.83□□□□□ -1.16
VPS36-206ENST00000497149 MAP3K11Q16584 847 aa7.83□□□□□ -1.16
VPS36-206ENST00000497149 FBXO11Q86XK2 927 aa7.83□□□□□ -1.16
VPS36-206ENST00000497149 RELL1Q8IUW5 271 aa7.83□□□□□ -1.16
VPS36-206ENST00000497149 STK35Q8TDR2 534 aa7.83□□□□□ -1.16
VPS36-206ENST00000497149 DDX41Q9UJV9 622 aaKnown RBP7.83□□□□□ -1.16
VPS36-206ENST00000497149 SAMM50Q9Y512 469 aa7.83□□□□□ -1.16
VPS36-206ENST00000497149 SPDYE3A6NKU9 549 aa7.82□□□□□ -1.16
VPS36-206ENST00000497149 CD68P34810 354 aaPredicted RBP7.82□□□□□ -1.16
VPS36-206ENST00000497149 LIG3P49916 1009 aa7.82□□□□□ -1.16
VPS36-206ENST00000497149 RAC1P63000 192 aa7.82□□□□□ -1.16
VPS36-206ENST00000497149 RAD51AP2Q09MP3 1159 aa7.82□□□□□ -1.16
VPS36-206ENST00000497149 TRIM28Q13263 835 aaKnown RBP7.82□□□□□ -1.16
VPS36-206ENST00000497149 AP3B2Q13367 1082 aa7.82□□□□□ -1.16
VPS36-206ENST00000497149 PWP1Q13610 501 aa7.82□□□□□ -1.16
VPS36-206ENST00000497149 ZNF394Q53GI3 561 aa7.82□□□□□ -1.16
VPS36-206ENST00000497149 PCNX4Q63HM2 1172 aa7.82□□□□□ -1.16
VPS36-206ENST00000497149 TTBK2Q6IQ55 1244 aa7.82□□□□□ -1.16
VPS36-206ENST00000497149 USP48Q86UV5 1035 aa7.82□□□□□ -1.16
VPS36-206ENST00000497149 SULF2Q8IWU5 870 aa7.82□□□□□ -1.16
VPS36-206ENST00000497149 FMR1NBQ8N0W7 255 aaPredicted RBP7.82□□□□□ -1.16
VPS36-206ENST00000497149 TMEM74Q96NL1 305 aa7.82□□□□□ -1.16
VPS36-206ENST00000497149 KBTBD4Q9NVX7 518 aa7.82□□□□□ -1.16
VPS36-206ENST00000497149 F6X3S4 739 aa7.81□□□□□ -1.16
VPS36-206ENST00000497149 CYP11A1P05108 521 aa7.81□□□□□ -1.16
VPS36-206ENST00000497149 GBP2P32456 591 aaPredicted RBP7.81□□□□□ -1.16
VPS36-206ENST00000497149 RPS26P62854 115 aaKnown RBP7.81□□□□□ -1.16
VPS36-206ENST00000497149 RACK1P63244 317 aaKnown RBP7.81□□□□□ -1.16
VPS36-206ENST00000497149 AGMOQ6ZNB7 445 aa7.81□□□□□ -1.16
VPS36-206ENST00000497149 PHC3Q8NDX5 983 aa7.81□□□□□ -1.16
VPS36-206ENST00000497149 DCAF11Q8TEB1 546 aa7.81□□□□□ -1.16
VPS36-206ENST00000497149 EMILIN2Q9BXX0 1053 aa7.81□□□□□ -1.16
VPS36-206ENST00000497149 NRSN2Q9GZP1 204 aa7.81□□□□□ -1.16
VPS36-206ENST00000497149 CYP8B1Q9UNU6 501 aa7.81□□□□□ -1.16
VPS36-206ENST00000497149 MINDY4BA8MYZ0 360 aa7.8□□□□□ -1.16
VPS36-206ENST00000497149 DLL1O00548 723 aa7.8□□□□□ -1.16
VPS36-206ENST00000497149 DDX3YO15523 660 aaKnown RBP7.8□□□□□ -1.16
VPS36-206ENST00000497149 POU4F3Q15319 338 aa7.8□□□□□ -1.16
VPS36-206ENST00000497149 RASIP1Q5U651 963 aa7.8□□□□□ -1.16
VPS36-206ENST00000497149 PDZD3Q86UT5 571 aa7.8□□□□□ -1.16
VPS36-206ENST00000497149 ZNF654Q8IZM8 581 aa7.8□□□□□ -1.16
VPS36-206ENST00000497149 TGIF2Q9GZN2 237 aa7.8□□□□□ -1.16
VPS36-206ENST00000497149 KCNK4Q9NYG8 393 aa7.8□□□□□ -1.16
VPS36-206ENST00000497149 NOP53Q9NZM5 478 aaKnown RBP7.8□□□□□ -1.16
VPS36-206ENST00000497149 TLR6Q9Y2C9 796 aa7.8□□□□□ -1.16
VPS36-206ENST00000497149 PCDHGB7Q9Y5F8 929 aa7.8□□□□□ -1.16
VPS36-206ENST00000497149 FAM229AH3BQW9 127 aa7.79□□□□□ -1.16
VPS36-206ENST00000497149 ADAM11O75078 769 aa7.79□□□□□ -1.16
VPS36-206ENST00000497149 GSTP1P09211 210 aaKnown RBP7.79□□□□□ -1.16
VPS36-206ENST00000497149 MAOBP27338 520 aa7.79□□□□□ -1.16
VPS36-206ENST00000497149 NLRP12P59046 1061 aa7.79□□□□□ -1.16
VPS36-206ENST00000497149 ZNF252P-AS1Q0IIN9 211 aa7.79□□□□□ -1.16
VPS36-206ENST00000497149 LRRC14Q15048 493 aa7.79□□□□□ -1.16
VPS36-206ENST00000497149 FOXD4L6Q3SYB3 417 aaPredicted RBP7.79□□□□□ -1.16
VPS36-206ENST00000497149 FOXD4L3Q6VB84 417 aaPredicted RBP7.79□□□□□ -1.16
VPS36-206ENST00000497149 GRIN3AQ8TCU5 1115 aa7.79□□□□□ -1.16
VPS36-206ENST00000497149 DCAF5Q96JK2 942 aa7.79□□□□□ -1.16
VPS36-206ENST00000497149 CBX8Q9HC52 389 aa7.79□□□□□ -1.16
VPS36-206ENST00000497149 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.79□□□□□ -1.16
VPS36-206ENST00000497149 ELNP15502 786 aa7.78□□□□□ -1.16
VPS36-206ENST00000497149 TFE3P19532 575 aaPredicted RBP7.78□□□□□ -1.16
VPS36-206ENST00000497149 PRRT3Q5FWE3 981 aa7.78□□□□□ -1.16
VPS36-206ENST00000497149 GPAT2Q6NUI2 795 aa7.78□□□□□ -1.16
VPS36-206ENST00000497149 RHOVQ96L33 236 aa7.78□□□□□ -1.16
VPS36-206ENST00000497149 CORO1BQ9BR76 489 aa7.78□□□□□ -1.16
VPS36-206ENST00000497149 ECEL1O95672 775 aa7.77□□□□□ -1.17
VPS36-206ENST00000497149 PF4P02776 101 aa7.77□□□□□ -1.17
VPS36-206ENST00000497149 EIF4A3P38919 411 aaKnown RBP7.77□□□□□ -1.17
VPS36-206ENST00000497149 LMNB2Q03252 620 aa7.77□□□□□ -1.17
VPS36-206ENST00000497149 CAMK2GQ13555 558 aaPredicted RBP7.77□□□□□ -1.17
VPS36-206ENST00000497149 LLGL2Q6P1M3 1020 aa7.77□□□□□ -1.17
VPS36-206ENST00000497149 IGF2-ASQ6U949 168 aa7.77□□□□□ -1.17
VPS36-206ENST00000497149 USP26Q9BXU7 913 aa7.77□□□□□ -1.17
VPS36-206ENST00000497149 ZC3H12CQ9C0D7 883 aaKnown RBP7.77□□□□□ -1.17
VPS36-206ENST00000497149 PCDHB5Q9Y5E4 795 aa7.77□□□□□ -1.17
VPS36-206ENST00000497149 LOC100289279A0A1B0GTE1 492 aa7.76□□□□□ -1.17
VPS36-206ENST00000497149 CTSBP07858 339 aa7.76□□□□□ -1.17
VPS36-206ENST00000497149 LMNB1P20700 586 aa7.76□□□□□ -1.17
VPS36-206ENST00000497149 PLA2G4EQ3MJ16 856 aa7.76□□□□□ -1.17
VPS36-206ENST00000497149 MAP1SQ66K74 1059 aaPredicted RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms