RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 KCNG4Q8TDN1 519 aa15.14■□□□□ 0.01
PTPN7-217ENST00000495688 XPO4Q9C0E2 1151 aaKnown RBP15.14■□□□□ 0.01
PTPN7-217ENST00000495688 NAT10Q9H0A0 1025 aaKnown RBP15.14■□□□□ 0.01
PTPN7-217ENST00000495688 AKAP2Q9Y2D5 859 aa15.14■□□□□ 0.01
PTPN7-217ENST00000495688 ZFYP08048 801 aaPredicted RBP15.13■□□□□ 0.01
PTPN7-217ENST00000495688 IFIT5Q13325 482 aaKnown RBP15.13■□□□□ 0.01
PTPN7-217ENST00000495688 PTPN14Q15678 1187 aa15.13■□□□□ 0.01
PTPN7-217ENST00000495688 AXDND1Q5T1B0 1012 aaPredicted RBP15.13■□□□□ 0.01
PTPN7-217ENST00000495688 NYAP1Q6ZVC0 841 aa15.13■□□□□ 0.01
PTPN7-217ENST00000495688 IFNKQ9P0W0 207 aa15.13■□□□□ 0.01
PTPN7-217ENST00000495688 CPDO75976 1380 aa15.13■□□□□ 0.01
PTPN7-217ENST00000495688 SPEF2Q9C093 1822 aa15.13■□□□□ 0.01
PTPN7-217ENST00000495688 PARP4Q9UKK3 1724 aaKnown RBP15.13■□□□□ 0.01
PTPN7-217ENST00000495688 UBE2Q2LH0YL09 131 aa15.13■□□□□ 0.01
PTPN7-217ENST00000495688 DHX16O60231 1041 aaKnown RBP15.13■□□□□ 0.01
PTPN7-217ENST00000495688 SMC2O95347 1197 aa15.13■□□□□ 0.01
PTPN7-217ENST00000495688 SYNE3Q6ZMZ3 975 aa15.13■□□□□ 0.01
PTPN7-217ENST00000495688 CYB5R4Q7L1T6 521 aa15.13■□□□□ 0.01
PTPN7-217ENST00000495688 TICAM2Q86XR7 235 aa15.13■□□□□ 0.01
PTPN7-217ENST00000495688 TBC1D10CQ8IV04 446 aa15.13■□□□□ 0.01
PTPN7-217ENST00000495688 PHKBQ93100 1093 aa15.13■□□□□ 0.01
PTPN7-217ENST00000495688 INCENPQ9NQS7 918 aa15.13■□□□□ 0.01
PTPN7-217ENST00000495688 STRN4Q9NRL3 753 aa15.13■□□□□ 0.01
PTPN7-217ENST00000495688 STRCP1A6NGW2 1772 aa15.13■□□□□ 0.01
PTPN7-217ENST00000495688 YEATS4O95619 227 aa15.12■□□□□ 0.01
PTPN7-217ENST00000495688 SLC3A2P08195 630 aaKnown RBP15.12■□□□□ 0.01
PTPN7-217ENST00000495688 PFKFB1P16118 471 aa15.12■□□□□ 0.01
PTPN7-217ENST00000495688 ZRSR1Q15695 479 aaKnown RBP15.12■□□□□ 0.01
PTPN7-217ENST00000495688 METTL24Q5JXM2 366 aa15.12■□□□□ 0.01
PTPN7-217ENST00000495688 SLC9C2Q5TAH2 1124 aa15.12■□□□□ 0.01
PTPN7-217ENST00000495688 ANO1Q5XXA6 986 aa15.12■□□□□ 0.01
PTPN7-217ENST00000495688 DNAJC10Q8IXB1 793 aa15.12■□□□□ 0.01
PTPN7-217ENST00000495688 GREM2Q9H772 168 aa15.12■□□□□ 0.01
PTPN7-217ENST00000495688 NEMFO60524 1076 aa15.12■□□□□ 0.01
PTPN7-217ENST00000495688 HLFQ16534 295 aa15.12■□□□□ 0.01
PTPN7-217ENST00000495688 CCAR2Q8N163 923 aaKnown RBP15.12■□□□□ 0.01
PTPN7-217ENST00000495688 ZNF215Q9UL58 517 aaPredicted RBP15.12■□□□□ 0.01
PTPN7-217ENST00000495688 ASAP1Q9ULH1 1129 aa15.12■□□□□ 0.01
PTPN7-217ENST00000495688 APPP05067 770 aa15.11■□□□□ 0.01
PTPN7-217ENST00000495688 LRRFIP1Q32MZ4 808 aaKnown RBP15.11■□□□□ 0.01
PTPN7-217ENST00000495688 LDHAL6AQ6ZMR3 332 aa15.11■□□□□ 0.01
PTPN7-217ENST00000495688 CADPS2Q86UW7 1296 aa15.11■□□□□ 0.01
PTPN7-217ENST00000495688 ZHX1Q9UKY1 873 aaPredicted RBP15.11■□□□□ 0.01
PTPN7-217ENST00000495688 RIC1Q4ADV7 1423 aa15.11■□□□□ 0.01
PTPN7-217ENST00000495688 MYO5AQ9Y4I1 1855 aaKnown RBP15.11■□□□□ 0.01
PTPN7-217ENST00000495688 IDH1O75874 414 aaKnown RBP15.11■□□□□ 0.01
PTPN7-217ENST00000495688 CSF1RP07333 972 aa15.11■□□□□ 0.01
PTPN7-217ENST00000495688 IL2RBP14784 551 aa15.11■□□□□ 0.01
PTPN7-217ENST00000495688 LMOD1P29536 600 aaPredicted RBP15.11■□□□□ 0.01
PTPN7-217ENST00000495688 CDC27P30260 824 aa15.11■□□□□ 0.01
PTPN7-217ENST00000495688 ARMCX5Q6P1M9 558 aa15.11■□□□□ 0.01
PTPN7-217ENST00000495688 TMC6Q7Z403 805 aa15.11■□□□□ 0.01
PTPN7-217ENST00000495688 BRAPQ7Z569 592 aa15.11■□□□□ 0.01
PTPN7-217ENST00000495688 MYL10Q9BUA6 226 aa15.11■□□□□ 0.01
PTPN7-217ENST00000495688 RIPOR2Q9Y4F9 1068 aa15.11■□□□□ 0.01
PTPN7-217ENST00000495688 IGSF3O75054 1194 aa15.1■□□□□ 0.01
PTPN7-217ENST00000495688 PCCAP05165 728 aaPredicted RBP15.1■□□□□ 0.01
PTPN7-217ENST00000495688 ATP1A3P13637 1013 aa15.1■□□□□ 0.01
PTPN7-217ENST00000495688 ITGA6P23229 1130 aa15.1■□□□□ 0.01
PTPN7-217ENST00000495688 NCAPHQ15003 741 aa15.1■□□□□ 0.01
PTPN7-217ENST00000495688 NKX1-1Q15270 411 aaPredicted RBP15.1■□□□□ 0.01
PTPN7-217ENST00000495688 PTPN21Q16825 1174 aa15.1■□□□□ 0.01
PTPN7-217ENST00000495688 MICU3Q86XE3 530 aa15.1■□□□□ 0.01
PTPN7-217ENST00000495688 PIH1D3Q9NQM4 214 aaKnown RBP15.1■□□□□ 0.01
PTPN7-217ENST00000495688 B4E1Z4 1266 aa15.1■□□□□ 0.01
PTPN7-217ENST00000495688 E4F1Q66K89 784 aaPredicted RBP15.1■□□□□ 0.01
PTPN7-217ENST00000495688 VPS37DQ86XT2 251 aa15.1■□□□□ 0.01
PTPN7-217ENST00000495688 ZBTB38Q8NAP3 1195 aaPredicted RBP15.1■□□□□ 0.01
PTPN7-217ENST00000495688 CHMP4CQ96CF2 233 aa15.1■□□□□ 0.01
PTPN7-217ENST00000495688 ALG1Q9BT22 464 aa15.1■□□□□ 0.01
PTPN7-217ENST00000495688 PLEKHG2Q9H7P9 1386 aa15.1■□□□□ 0.01
PTPN7-217ENST00000495688 ADD2P35612 726 aa15.1■□□□□ 0.01
PTPN7-217ENST00000495688 CLIC6Q96NY7 704 aa15.1■□□□□ 0.01
PTPN7-217ENST00000495688 OSBPL5Q9H0X9 879 aaPredicted RBP15.1■□□□□ 0.01
PTPN7-217ENST00000495688 ANGEL1Q9UNK9 670 aaKnown RBP15.1■□□□□ 0.01
PTPN7-217ENST00000495688 AKAP11Q9UKA4 1901 aa15.09■□□□□ 0.01
PTPN7-217ENST00000495688 KAT6BQ8WYB5 2073 aa15.09■□□□□ 0.01
PTPN7-217ENST00000495688 CMA1P23946 247 aa15.09■□□□□ 0.01
PTPN7-217ENST00000495688 METAP2P50579 478 aaKnown RBP eCLIP15.09■□□□□ 0.01
PTPN7-217ENST00000495688 DMTNQ08495 405 aa15.09■□□□□ 0.01
PTPN7-217ENST00000495688 TRDNQ13061 729 aa15.09■□□□□ 0.01
PTPN7-217ENST00000495688 TTLL11Q8NHH1 800 aa15.09■□□□□ 0.01
PTPN7-217ENST00000495688 TMOD3Q9NYL9 352 aa15.09■□□□□ 0.01
PTPN7-217ENST00000495688 TNS2Q63HR2 1409 aa15.09■□□□□ 0.01
PTPN7-217ENST00000495688 MYH7P12883 1935 aa15.09■□□□□ 0.01
PTPN7-217ENST00000495688 NLRP12P59046 1061 aa15.09■□□□□ 0.01
PTPN7-217ENST00000495688 SLC39A14Q15043 492 aa15.09■□□□□ 0.01
PTPN7-217ENST00000495688 KRT40Q6A162 431 aa15.09■□□□□ 0.01
PTPN7-217ENST00000495688 SHC4Q6S5L8 630 aa15.09■□□□□ 0.01
PTPN7-217ENST00000495688 KIF6Q6ZMV9 814 aa15.09■□□□□ 0.01
PTPN7-217ENST00000495688 BRINP3Q76B58 766 aa15.09■□□□□ 0.01
PTPN7-217ENST00000495688 HSD3B7Q9H2F3 369 aa15.09■□□□□ 0.01
PTPN7-217ENST00000495688 CNNM1Q9NRU3 951 aa15.09■□□□□ 0.01
PTPN7-217ENST00000495688 WWC3Q9ULE0 1092 aa15.09■□□□□ 0.01
PTPN7-217ENST00000495688 SNAP23O00161 211 aa15.08■□□□□ 0
PTPN7-217ENST00000495688 NPHP1O15259 732 aa15.08■□□□□ 0
PTPN7-217ENST00000495688 PHKA1P46020 1223 aa15.08■□□□□ 0
PTPN7-217ENST00000495688 TRIM28Q13263 835 aaKnown RBP15.08■□□□□ 0
PTPN7-217ENST00000495688 APOA5Q6Q788 366 aa15.08■□□□□ 0
PTPN7-217ENST00000495688 HELBQ8NG08 1087 aaPredicted RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms