RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 AGBL3Q8NEM8 1001 aa19.1■□□□□ 0.65
HPS4-216ENST00000493455 FKBP1AP62942 108 aaKnown RBP19.09■□□□□ 0.65
HPS4-216ENST00000493455 MECOMQ03112 1051 aa19.09■□□□□ 0.65
HPS4-216ENST00000493455 MAP3K12Q12852 859 aa19.09■□□□□ 0.65
HPS4-216ENST00000493455 DIXDC1Q155Q3 683 aa19.09■□□□□ 0.65
HPS4-216ENST00000493455 RBM26Q5T8P6 1007 aaKnown RBP19.09■□□□□ 0.65
HPS4-216ENST00000493455 MAGEB6Q8N7X4 407 aa19.09■□□□□ 0.65
HPS4-216ENST00000493455 EVI5LQ96CN4 794 aa19.09■□□□□ 0.65
HPS4-216ENST00000493455 HDAC9Q9UKV0 1011 aa19.09■□□□□ 0.65
HPS4-216ENST00000493455 USP17L8P0C7I0 530 aa19.08■□□□□ 0.64
HPS4-216ENST00000493455 RPS12P25398 132 aaKnown RBP19.08■□□□□ 0.64
HPS4-216ENST00000493455 OGFOD1Q8N543 542 aa19.08■□□□□ 0.64
HPS4-216ENST00000493455 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.08■□□□□ 0.64
HPS4-216ENST00000493455 CNOT7Q9UIV1 285 aaKnown RBP19.08■□□□□ 0.64
HPS4-216ENST00000493455 MAST3O60307 1309 aa19.07■□□□□ 0.64
HPS4-216ENST00000493455 UTRNP46939 3433 aa19.07■□□□□ 0.64
HPS4-216ENST00000493455 SDSP20132 328 aa19.07■□□□□ 0.64
HPS4-216ENST00000493455 EPS15P42566 896 aa19.07■□□□□ 0.64
HPS4-216ENST00000493455 SLFNL1Q499Z3 407 aa19.07■□□□□ 0.64
HPS4-216ENST00000493455 SLC9C2Q5TAH2 1124 aa19.07■□□□□ 0.64
HPS4-216ENST00000493455 NAA16Q6N069 864 aaPredicted RBP19.07■□□□□ 0.64
HPS4-216ENST00000493455 KBTBD3Q8NAB2 608 aa19.07■□□□□ 0.64
HPS4-216ENST00000493455 GMLQ99445 158 aa19.07■□□□□ 0.64
HPS4-216ENST00000493455 H7C1D1 291 aa19.06■□□□□ 0.64
HPS4-216ENST00000493455 ZBTB22O15209 634 aa19.06■□□□□ 0.64
HPS4-216ENST00000493455 CHGBP05060 677 aa19.06■□□□□ 0.64
HPS4-216ENST00000493455 CYP7A1P22680 504 aa19.06■□□□□ 0.64
HPS4-216ENST00000493455 TBC1D10BQ4KMP7 808 aaPredicted RBP19.06■□□□□ 0.64
HPS4-216ENST00000493455 NSUN4Q96CB9 384 aaKnown RBP19.06■□□□□ 0.64
HPS4-216ENST00000493455 GPRC5DQ9NZD1 345 aa19.06■□□□□ 0.64
HPS4-216ENST00000493455 PCDHAC2Q9Y5I4 1007 aa19.06■□□□□ 0.64
HPS4-216ENST00000493455 WDR90Q96KV7 1748 aa19.05■□□□□ 0.64
HPS4-216ENST00000493455 PDE6AP16499 860 aa19.05■□□□□ 0.64
HPS4-216ENST00000493455 CRKP46108 304 aa19.05■□□□□ 0.64
HPS4-216ENST00000493455 GSTO1P78417 241 aa19.05■□□□□ 0.64
HPS4-216ENST00000493455 CFAP100Q494V2 611 aa19.05■□□□□ 0.64
HPS4-216ENST00000493455 ZSCAN25Q6NSZ9 544 aa19.05■□□□□ 0.64
HPS4-216ENST00000493455 SAMD7Q7Z3H4 446 aa19.05■□□□□ 0.64
HPS4-216ENST00000493455 DPF2Q92785 391 aa19.05■□□□□ 0.64
HPS4-216ENST00000493455 TEKT1Q969V4 418 aa19.05■□□□□ 0.64
HPS4-216ENST00000493455 SUGT1Q9Y2Z0 365 aa19.05■□□□□ 0.64
HPS4-216ENST00000493455 SCN4AP35499 1836 aa19.04■□□□□ 0.64
HPS4-216ENST00000493455 ZNF532Q9HCE3 1301 aa19.04■□□□□ 0.64
HPS4-216ENST00000493455 NOL10Q9BSC4 688 aaKnown RBP19.04■□□□□ 0.64
HPS4-216ENST00000493455 RRAGCQ9HB90 399 aa19.04■□□□□ 0.64
HPS4-216ENST00000493455 MYOZ2Q9NPC6 264 aa19.04■□□□□ 0.64
HPS4-216ENST00000493455 HACL1Q9UJ83 578 aa19.04■□□□□ 0.64
HPS4-216ENST00000493455 RNF113AO15541 343 aaKnown RBP19.03■□□□□ 0.64
HPS4-216ENST00000493455 DLGAP5Q15398 846 aa19.03■□□□□ 0.64
HPS4-216ENST00000493455 KIF4BQ2VIQ3 1234 aa19.03■□□□□ 0.64
HPS4-216ENST00000493455 ADGRA1Q86SQ6 560 aa19.03■□□□□ 0.64
HPS4-216ENST00000493455 SLF2Q8IX21 1173 aa19.03■□□□□ 0.64
HPS4-216ENST00000493455 MIGA1Q8NAN2 632 aa19.03■□□□□ 0.64
HPS4-216ENST00000493455 ZNF384Q8TF68 577 aa19.03■□□□□ 0.64
HPS4-216ENST00000493455 DAGLAQ9Y4D2 1042 aa19.03■□□□□ 0.64
HPS4-216ENST00000493455 MROH7-TTC4A0A0A0MT08 1334 aa19.02■□□□□ 0.64
HPS4-216ENST00000493455 EGFRP00533 1210 aa19.02■□□□□ 0.64
HPS4-216ENST00000493455 LDHCP07864 332 aa19.02■□□□□ 0.64
HPS4-216ENST00000493455 YY1P25490 414 aa19.02■□□□□ 0.64
HPS4-216ENST00000493455 ADD2P35612 726 aa19.02■□□□□ 0.64
HPS4-216ENST00000493455 BTDP43251 543 aa19.02■□□□□ 0.64
HPS4-216ENST00000493455 LRRFIP1Q32MZ4 808 aaKnown RBP19.02■□□□□ 0.64
HPS4-216ENST00000493455 EAPPQ56P03 285 aaPredicted RBP19.02■□□□□ 0.64
HPS4-216ENST00000493455 BMP2KLQ5H9B9 411 aa19.02■□□□□ 0.64
HPS4-216ENST00000493455 TRPM4Q8TD43 1214 aa19.02■□□□□ 0.64
HPS4-216ENST00000493455 L3MBTL3Q96JM7 780 aaPredicted RBP19.02■□□□□ 0.64
HPS4-216ENST00000493455 NMRK2Q9NPI5 230 aa19.02■□□□□ 0.64
HPS4-216ENST00000493455 DIAPH3Q9NSV4 1193 aa19.02■□□□□ 0.64
HPS4-216ENST00000493455 IQCA1LA6NCM1 817 aa19.01■□□□□ 0.63
HPS4-216ENST00000493455 EPHX2P34913 555 aa19.01■□□□□ 0.63
HPS4-216ENST00000493455 AATFQ9NY61 560 aaKnown RBP eCLIP19.01■□□□□ 0.63
HPS4-216ENST00000493455 SERPINA10Q9UK55 444 aa19.01■□□□□ 0.63
HPS4-216ENST00000493455 ECM29Q5VYK3 1845 aa19.01■□□□□ 0.63
HPS4-216ENST00000493455 ZNF280AP59817 542 aaPredicted RBP19■□□□□ 0.63
HPS4-216ENST00000493455 DYNLL1P63167 89 aaKnown RBP19■□□□□ 0.63
HPS4-216ENST00000493455 NMIQ13287 307 aaPredicted RBP19■□□□□ 0.63
HPS4-216ENST00000493455 HHIPL2Q6UWX4 724 aa19■□□□□ 0.63
HPS4-216ENST00000493455 ADARB2Q9NS39 739 aaKnown RBP19■□□□□ 0.63
HPS4-216ENST00000493455 TCRBV5S4A2TA0A5A2 114 aa18.99■□□□□ 0.63
HPS4-216ENST00000493455 CLRN2A0PK11 232 aa18.99■□□□□ 0.63
HPS4-216ENST00000493455 ZFYP08048 801 aaPredicted RBP18.99■□□□□ 0.63
HPS4-216ENST00000493455 NBPF9Q3BBW0 867 aa18.99■□□□□ 0.63
HPS4-216ENST00000493455 CWC27Q6UX04 472 aaKnown RBP18.99■□□□□ 0.63
HPS4-216ENST00000493455 FAM227BQ96M60 508 aa18.99■□□□□ 0.63
HPS4-216ENST00000493455 SEC62Q99442 399 aaKnown RBP18.99■□□□□ 0.63
HPS4-216ENST00000493455 TDRD3Q9H7E2 651 aaKnown RBP18.99■□□□□ 0.63
HPS4-216ENST00000493455 GPBP1L1Q9HC44 474 aaPredicted RBP18.99■□□□□ 0.63
HPS4-216ENST00000493455 MAGEB6P1A0A0J9YX57 407 aa18.98■□□□□ 0.63
HPS4-216ENST00000493455 SPDYE2BA6NHP3 402 aa18.98■□□□□ 0.63
HPS4-216ENST00000493455 POTECB2RU33 542 aa18.98■□□□□ 0.63
HPS4-216ENST00000493455 M0R2C6 588 aa18.98■□□□□ 0.63
HPS4-216ENST00000493455 MBD4O95243 580 aa18.98■□□□□ 0.63
HPS4-216ENST00000493455 SPDYE6P0CI01 402 aa18.98■□□□□ 0.63
HPS4-216ENST00000493455 HDLBPQ00341 1268 aaKnown RBP18.98■□□□□ 0.63
HPS4-216ENST00000493455 UBE3CQ15386 1083 aa18.98■□□□□ 0.63
HPS4-216ENST00000493455 APPBP2Q92624 585 aa18.98■□□□□ 0.63
HPS4-216ENST00000493455 PRMT6Q96LA8 375 aaPredicted RBP18.98■□□□□ 0.63
HPS4-216ENST00000493455 PUS7LQ9H0K6 701 aaKnown RBP18.98■□□□□ 0.63
HPS4-216ENST00000493455 TAF1DQ9H5J8 278 aaPredicted RBP18.98■□□□□ 0.63
HPS4-216ENST00000493455 ARMT1Q9H993 441 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms