RNA–Protein interactions for RNA: ENST00000492451.1

PTPN7-215, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5

Gene PTPN7, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-215ENST00000492451 HDLBPQ00341 1268 aaKnown RBP16.98■□□□□ 0.31
PTPN7-215ENST00000492451 AAMPQ13685 434 aa16.98■□□□□ 0.31
PTPN7-215ENST00000492451 NBPF9Q3BBW0 867 aa16.98■□□□□ 0.31
PTPN7-215ENST00000492451 ANGEL2Q5VTE6 544 aaKnown RBP16.98■□□□□ 0.31
PTPN7-215ENST00000492451 PAXIP1Q6ZW49 1069 aaPredicted RBP16.98■□□□□ 0.31
PTPN7-215ENST00000492451 SULF1Q8IWU6 871 aa16.98■□□□□ 0.31
PTPN7-215ENST00000492451 ZGPATQ8N5A5 531 aaKnown RBP16.98■□□□□ 0.31
PTPN7-215ENST00000492451 KIF1BPQ96EK5 621 aa16.98■□□□□ 0.31
PTPN7-215ENST00000492451 CRBNQ96SW2 442 aa16.98■□□□□ 0.31
PTPN7-215ENST00000492451 POLR2AP24928 1970 aaKnown RBP16.98■□□□□ 0.31
PTPN7-215ENST00000492451 SALL1Q9NSC2 1324 aa16.97■□□□□ 0.31
PTPN7-215ENST00000492451 THSD7BQ9C0I4 1608 aa16.97■□□□□ 0.31
PTPN7-215ENST00000492451 MYO1BO43795 1136 aa16.97■□□□□ 0.31
PTPN7-215ENST00000492451 RASGRF1Q13972 1273 aa16.97■□□□□ 0.31
PTPN7-215ENST00000492451 CFAP100Q494V2 611 aa16.97■□□□□ 0.31
PTPN7-215ENST00000492451 CCDC158Q5M9N0 1113 aa16.97■□□□□ 0.31
PTPN7-215ENST00000492451 RHPN1Q8TCX5 695 aa16.97■□□□□ 0.31
PTPN7-215ENST00000492451 ZBED3Q96IU2 234 aaPredicted RBP16.97■□□□□ 0.31
PTPN7-215ENST00000492451 MRIQ9BWK5 157 aa16.97■□□□□ 0.31
PTPN7-215ENST00000492451 ARID4AP29374 1257 aaPredicted RBP16.96■□□□□ 0.31
PTPN7-215ENST00000492451 RBM5P52756 815 aaKnown RBP eCLIP16.96■□□□□ 0.31
PTPN7-215ENST00000492451 CLASRPQ8N2M8 674 aaKnown RBP16.96■□□□□ 0.31
PTPN7-215ENST00000492451 SUPT16HQ9Y5B9 1047 aaKnown RBP16.96■□□□□ 0.31
PTPN7-215ENST00000492451 COL1A1P02452 1464 aaPredicted RBP16.96■□□□□ 0.31
PTPN7-215ENST00000492451 SPDYE2BA6NHP3 402 aa16.95■□□□□ 0.3
PTPN7-215ENST00000492451 LDHBP07195 334 aaKnown RBP16.95■□□□□ 0.3
PTPN7-215ENST00000492451 SPDYE6P0CI01 402 aa16.95■□□□□ 0.3
PTPN7-215ENST00000492451 TTC39AQ5SRH9 613 aa16.95■□□□□ 0.3
PTPN7-215ENST00000492451 SPTY2D1Q68D10 685 aaPredicted RBP16.95■□□□□ 0.3
PTPN7-215ENST00000492451 APOBEC3FQ8IUX4 373 aaKnown RBP16.95■□□□□ 0.3
PTPN7-215ENST00000492451 TEKT1Q969V4 418 aa16.95■□□□□ 0.3
PTPN7-215ENST00000492451 EAF2Q96CJ1 260 aaPredicted RBP16.95■□□□□ 0.3
PTPN7-215ENST00000492451 ZNF512BQ96KM6 892 aaPredicted RBP16.95■□□□□ 0.3
PTPN7-215ENST00000492451 ZIC5Q96T25 663 aa16.95■□□□□ 0.3
PTPN7-215ENST00000492451 DBNDD2Q9BQY9 259 aa16.95■□□□□ 0.3
PTPN7-215ENST00000492451 ECM29Q5VYK3 1845 aa16.95■□□□□ 0.3
PTPN7-215ENST00000492451 APBB1O00213 710 aa16.94■□□□□ 0.3
PTPN7-215ENST00000492451 CRKP46108 304 aa16.94■□□□□ 0.3
PTPN7-215ENST00000492451 GRIK5Q16478 980 aa16.94■□□□□ 0.3
PTPN7-215ENST00000492451 AACSQ86V21 672 aa16.94■□□□□ 0.3
PTPN7-215ENST00000492451 SPATA5Q8NB90 893 aa16.94■□□□□ 0.3
PTPN7-215ENST00000492451 HMG20BQ9P0W2 317 aa16.94■□□□□ 0.3
PTPN7-215ENST00000492451 TNS4Q8IZW8 715 aa16.93■□□□□ 0.3
PTPN7-215ENST00000492451 CDCA5Q96FF9 252 aa16.93■□□□□ 0.3
PTPN7-215ENST00000492451 PRMT6Q96LA8 375 aaPredicted RBP16.93■□□□□ 0.3
PTPN7-215ENST00000492451 CCDC8Q9H0W5 538 aaPredicted RBP16.93■□□□□ 0.3
PTPN7-215ENST00000492451 IL1RAPL2Q9NP60 686 aa16.93■□□□□ 0.3
PTPN7-215ENST00000492451 DBNLQ9UJU6 430 aaKnown RBP16.93■□□□□ 0.3
PTPN7-215ENST00000492451 PCDHB15Q9Y5E8 787 aa16.93■□□□□ 0.3
PTPN7-215ENST00000492451 HSPA8P11142 646 aaKnown RBP16.92■□□□□ 0.3
PTPN7-215ENST00000492451 ECE1P42892 770 aa16.92■□□□□ 0.3
PTPN7-215ENST00000492451 LBX1P52954 281 aa16.92■□□□□ 0.3
PTPN7-215ENST00000492451 HUNKP57058 714 aa16.92■□□□□ 0.3
PTPN7-215ENST00000492451 PRAMEF18Q5VWM3 479 aa16.92■□□□□ 0.3
PTPN7-215ENST00000492451 HHIPL2Q6UWX4 724 aa16.92■□□□□ 0.3
PTPN7-215ENST00000492451 HHIPL1Q96JK4 782 aa16.92■□□□□ 0.3
PTPN7-215ENST00000492451 ZDHHC15Q96MV8 337 aa16.92■□□□□ 0.3
PTPN7-215ENST00000492451 LRRCC1Q9C099 1032 aa16.92■□□□□ 0.3
PTPN7-215ENST00000492451 DCTPP1Q9H773 170 aa16.92■□□□□ 0.3
PTPN7-215ENST00000492451 ABCF2Q9UG63 623 aa16.92■□□□□ 0.3
PTPN7-215ENST00000492451 PCDHAC2Q9Y5I4 1007 aa16.92■□□□□ 0.3
PTPN7-215ENST00000492451 IFIT2P09913 472 aaKnown RBP16.91■□□□□ 0.3
PTPN7-215ENST00000492451 PRDX5P30044 214 aa16.91■□□□□ 0.3
PTPN7-215ENST00000492451 MCAMP43121 646 aa16.91■□□□□ 0.3
PTPN7-215ENST00000492451 CTCFP49711 727 aaPredicted RBP16.91■□□□□ 0.3
PTPN7-215ENST00000492451 SLF2Q8IX21 1173 aa16.91■□□□□ 0.3
PTPN7-215ENST00000492451 AIDAQ96BJ3 306 aa16.91■□□□□ 0.3
PTPN7-215ENST00000492451 GBA2Q9HCG7 927 aaPredicted RBP16.91■□□□□ 0.3
PTPN7-215ENST00000492451 TLR7Q9NYK1 1049 aaKnown RBP16.91■□□□□ 0.3
PTPN7-215ENST00000492451 PPP2R3BQ9Y5P8 575 aa16.91■□□□□ 0.3
PTPN7-215ENST00000492451 IGSF3O75054 1194 aa16.9■□□□□ 0.3
PTPN7-215ENST00000492451 TNFAIP1Q13829 316 aa16.9■□□□□ 0.3
PTPN7-215ENST00000492451 MOB2Q70IA6 237 aa16.9■□□□□ 0.3
PTPN7-215ENST00000492451 ERICH6Q7L0X2 663 aa16.9■□□□□ 0.3
PTPN7-215ENST00000492451 DZIP1Q86YF9 867 aaKnown RBP16.9■□□□□ 0.3
PTPN7-215ENST00000492451 TSKSQ9UJT2 592 aa16.9■□□□□ 0.3
PTPN7-215ENST00000492451 AOX1Q06278 1338 aa16.9■□□□□ 0.3
PTPN7-215ENST00000492451 CLRN2A0PK11 232 aa16.89■□□□□ 0.29
PTPN7-215ENST00000492451 FAM155AB1AL88 458 aaPredicted RBP16.89■□□□□ 0.29
PTPN7-215ENST00000492451 NF2P35240 595 aa16.89■□□□□ 0.29
PTPN7-215ENST00000492451 MAP2K1Q02750 393 aaPredicted RBP16.89■□□□□ 0.29
PTPN7-215ENST00000492451 SPDYE2Q495Y8 402 aa16.89■□□□□ 0.29
PTPN7-215ENST00000492451 C2orf69Q8N8R5 385 aa16.89■□□□□ 0.29
PTPN7-215ENST00000492451 TDRD3Q9H7E2 651 aaKnown RBP16.89■□□□□ 0.29
PTPN7-215ENST00000492451 VEZTQ9HBM0 779 aa16.89■□□□□ 0.29
PTPN7-215ENST00000492451 PRDM10Q9NQV6 1147 aa16.89■□□□□ 0.29
PTPN7-215ENST00000492451 ZNF70Q9UC06 446 aaPredicted RBP16.89■□□□□ 0.29
PTPN7-215ENST00000492451 AKAP11Q9UKA4 1901 aa16.88■□□□□ 0.29
PTPN7-215ENST00000492451 MAP2K2P36507 400 aa16.88■□□□□ 0.29
PTPN7-215ENST00000492451 TNNI2P48788 182 aa16.88■□□□□ 0.29
PTPN7-215ENST00000492451 GSTO1P78417 241 aa16.88■□□□□ 0.29
PTPN7-215ENST00000492451 PI16Q6UXB8 463 aa16.88■□□□□ 0.29
PTPN7-215ENST00000492451 DEFB129Q9H1M3 183 aa16.88■□□□□ 0.29
PTPN7-215ENST00000492451 TMOD2Q9NZR1 351 aa16.88■□□□□ 0.29
PTPN7-215ENST00000492451 LRP2BPQ9P2M1 347 aa16.88■□□□□ 0.29
PTPN7-215ENST00000492451 CAPN15O75808 1086 aa16.87■□□□□ 0.29
PTPN7-215ENST00000492451 LDHCP07864 332 aa16.87■□□□□ 0.29
PTPN7-215ENST00000492451 FKBP1BP68106 108 aa16.87■□□□□ 0.29
PTPN7-215ENST00000492451 HDAC1Q13547 482 aaPredicted RBP16.87■□□□□ 0.29
PTPN7-215ENST00000492451 DIXDC1Q155Q3 683 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms