RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 NWD1Q149M9 1564 aa8.49□□□□□ -1.05
NPHP3-208ENST00000490993 PDE6AP16499 860 aa8.49□□□□□ -1.05
NPHP3-208ENST00000490993 UBE4AQ14139 1066 aa8.49□□□□□ -1.05
NPHP3-208ENST00000490993 CCDC144CPQ8IYA2 1237 aa8.49□□□□□ -1.05
NPHP3-208ENST00000490993 PES1O00541 588 aaKnown RBP8.48□□□□□ -1.05
NPHP3-208ENST00000490993 CYP21A2P08686 494 aa8.48□□□□□ -1.05
NPHP3-208ENST00000490993 CDC37L1Q7L3B6 337 aa8.48□□□□□ -1.05
NPHP3-208ENST00000490993 CNBD1Q8NA66 436 aa8.48□□□□□ -1.05
NPHP3-208ENST00000490993 CNNM3Q8NE01 707 aa8.48□□□□□ -1.05
NPHP3-208ENST00000490993 ARMT1Q9H993 441 aa8.48□□□□□ -1.05
NPHP3-208ENST00000490993 MTMR7Q9Y216 660 aa8.48□□□□□ -1.05
NPHP3-208ENST00000490993 COL15A1P39059 1388 aa8.48□□□□□ -1.05
NPHP3-208ENST00000490993 PALLDQ8WX93 1383 aa8.48□□□□□ -1.05
NPHP3-208ENST00000490993 ADORA1P30542 326 aa8.48□□□□□ -1.05
NPHP3-208ENST00000490993 NLRP5P59047 1200 aa8.48□□□□□ -1.05
NPHP3-208ENST00000490993 TYRO3Q06418 890 aa8.48□□□□□ -1.05
NPHP3-208ENST00000490993 HOMER1Q86YM7 354 aa8.48□□□□□ -1.05
NPHP3-208ENST00000490993 LEO1Q8WVC0 666 aaPredicted RBP8.48□□□□□ -1.05
NPHP3-208ENST00000490993 ABCC6O95255 1503 aa8.48□□□□□ -1.05
NPHP3-208ENST00000490993 ELP1O95163 1332 aa8.48□□□□□ -1.05
NPHP3-208ENST00000490993 C6orf229H3BNL8 230 aa8.48□□□□□ -1.05
NPHP3-208ENST00000490993 MIGA1Q8NAN2 632 aa8.48□□□□□ -1.05
NPHP3-208ENST00000490993 WDR66Q8TBY9 1149 aa8.48□□□□□ -1.05
NPHP3-208ENST00000490993 CDK5RAP3Q96JB5 506 aa8.48□□□□□ -1.05
NPHP3-208ENST00000490993 MAP7D2Q96T17 732 aa8.48□□□□□ -1.05
NPHP3-208ENST00000490993 ANO8Q9HCE9 1232 aaPredicted RBP8.48□□□□□ -1.05
NPHP3-208ENST00000490993 IQSEC3Q9UPP2 1182 aaPredicted RBP8.48□□□□□ -1.05
NPHP3-208ENST00000490993 DLG5Q8TDM6 1919 aa8.48□□□□□ -1.05
NPHP3-208ENST00000490993 FGAP02671 866 aa8.48□□□□□ -1.05
NPHP3-208ENST00000490993 LDHBP07195 334 aaKnown RBP8.48□□□□□ -1.05
NPHP3-208ENST00000490993 ADD2P35612 726 aa8.48□□□□□ -1.05
NPHP3-208ENST00000490993 TMEM87AQ8NBN3 555 aa8.48□□□□□ -1.05
NPHP3-208ENST00000490993 RBSNQ9H1K0 784 aa8.48□□□□□ -1.05
NPHP3-208ENST00000490993 CLSTN2Q9H4D0 955 aa8.48□□□□□ -1.05
NPHP3-208ENST00000490993 ADAMTSL3P82987 1691 aa8.47□□□□□ -1.05
NPHP3-208ENST00000490993 MED23Q9ULK4 1368 aa8.47□□□□□ -1.05
NPHP3-208ENST00000490993 B4E1Z4 1266 aa8.47□□□□□ -1.05
NPHP3-208ENST00000490993 IPO7O95373 1038 aaKnown RBP8.47□□□□□ -1.05
NPHP3-208ENST00000490993 PCP11498 1178 aaKnown RBP8.47□□□□□ -1.05
NPHP3-208ENST00000490993 SYKP43405 635 aa8.47□□□□□ -1.05
NPHP3-208ENST00000490993 RFX5P48382 616 aaPredicted RBP8.47□□□□□ -1.05
NPHP3-208ENST00000490993 RPS8P62241 208 aaKnown RBP8.47□□□□□ -1.05
NPHP3-208ENST00000490993 FAM160A1Q05DH4 1040 aa8.47□□□□□ -1.05
NPHP3-208ENST00000490993 TMED8Q6PL24 325 aaPredicted RBP8.47□□□□□ -1.05
NPHP3-208ENST00000490993 RAB11FIP4Q86YS3 637 aa8.47□□□□□ -1.05
NPHP3-208ENST00000490993 SMARCE1Q969G3 411 aa8.47□□□□□ -1.05
NPHP3-208ENST00000490993 GSDMDP57764 484 aa8.47□□□□□ -1.05
NPHP3-208ENST00000490993 ANO6Q4KMQ2 910 aa8.47□□□□□ -1.05
NPHP3-208ENST00000490993 AKNAD1Q5T1N1 836 aa8.47□□□□□ -1.05
NPHP3-208ENST00000490993 ZNF592Q92610 1267 aa8.47□□□□□ -1.05
NPHP3-208ENST00000490993 RPAP1Q9BWH6 1393 aaPredicted RBP8.47□□□□□ -1.05
NPHP3-208ENST00000490993 DEXIO95424 95 aa8.47□□□□□ -1.05
NPHP3-208ENST00000490993 CHRNDQ07001 517 aa8.47□□□□□ -1.05
NPHP3-208ENST00000490993 HSP90AA2PQ14568 343 aaPredicted RBP8.47□□□□□ -1.05
NPHP3-208ENST00000490993 ATG9AQ7Z3C6 839 aa8.47□□□□□ -1.05
NPHP3-208ENST00000490993 GPT2Q8TD30 523 aa8.47□□□□□ -1.05
NPHP3-208ENST00000490993 TMEM63CQ9P1W3 806 aa8.47□□□□□ -1.05
NPHP3-208ENST00000490993 CLIP2Q9UDT6 1046 aa8.47□□□□□ -1.05
NPHP3-208ENST00000490993 M0R2C6 588 aa8.47□□□□□ -1.05
NPHP3-208ENST00000490993 IFNL3Q8IZI9 196 aa8.47□□□□□ -1.05
NPHP3-208ENST00000490993 CCDC148Q8NFR7 591 aa8.47□□□□□ -1.05
NPHP3-208ENST00000490993 MAGEC2Q9UBF1 373 aaPredicted RBP8.47□□□□□ -1.05
NPHP3-208ENST00000490993 COL5A2P05997 1499 aaPredicted RBP8.46□□□□□ -1.05
NPHP3-208ENST00000490993 KIF2AO00139 706 aaPredicted RBP8.46□□□□□ -1.05
NPHP3-208ENST00000490993 GADD45BO75293 160 aaPredicted RBP8.46□□□□□ -1.05
NPHP3-208ENST00000490993 DDIT3P35638 169 aa8.46□□□□□ -1.05
NPHP3-208ENST00000490993 SF3B2Q13435 895 aaKnown RBP8.46□□□□□ -1.05
NPHP3-208ENST00000490993 HLFQ16534 295 aa8.46□□□□□ -1.05
NPHP3-208ENST00000490993 CCDC82Q8N4S0 544 aa8.46□□□□□ -1.05
NPHP3-208ENST00000490993 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.46□□□□□ -1.05
NPHP3-208ENST00000490993 CTDP1Q9Y5B0 961 aaPredicted RBP8.46□□□□□ -1.05
NPHP3-208ENST00000490993 LTN1O94822 1766 aa8.46□□□□□ -1.05
NPHP3-208ENST00000490993 WDR19Q8NEZ3 1342 aa8.46□□□□□ -1.05
NPHP3-208ENST00000490993 CCDC194A0A1B0GVG4 234 aa8.46□□□□□ -1.06
NPHP3-208ENST00000490993 JAK2O60674 1132 aa8.46□□□□□ -1.06
NPHP3-208ENST00000490993 CALML3P27482 149 aa8.46□□□□□ -1.06
NPHP3-208ENST00000490993 ZMYM6O95789 1325 aa8.46□□□□□ -1.06
NPHP3-208ENST00000490993 CYP2E1P05181 493 aaPredicted RBP8.46□□□□□ -1.06
NPHP3-208ENST00000490993 CSF1RP07333 972 aa8.46□□□□□ -1.06
NPHP3-208ENST00000490993 TSPY3P0CV98 308 aa8.46□□□□□ -1.06
NPHP3-208ENST00000490993 TSPY8P0CW00 308 aa8.46□□□□□ -1.06
NPHP3-208ENST00000490993 PDIA3P30101 505 aaKnown RBP8.46□□□□□ -1.06
NPHP3-208ENST00000490993 PHKA1P46020 1223 aa8.46□□□□□ -1.06
NPHP3-208ENST00000490993 PDILTQ8N807 584 aa8.46□□□□□ -1.06
NPHP3-208ENST00000490993 YEATS4O95619 227 aa8.46□□□□□ -1.06
NPHP3-208ENST00000490993 RILPL1Q5EBL4 403 aa8.46□□□□□ -1.06
NPHP3-208ENST00000490993 NCOA5Q9HCD5 579 aaKnown RBP8.46□□□□□ -1.06
NPHP3-208ENST00000490993 ZKSCAN5Q9Y2L8 839 aa8.46□□□□□ -1.06
NPHP3-208ENST00000490993 RBM5P52756 815 aaKnown RBP eCLIP8.45□□□□□ -1.06
NPHP3-208ENST00000490993 SCRN1Q12765 414 aa8.45□□□□□ -1.06
NPHP3-208ENST00000490993 ZNF512BQ96KM6 892 aaPredicted RBP8.45□□□□□ -1.06
NPHP3-208ENST00000490993 PCMTD1Q96MG8 357 aaPredicted RBP8.45□□□□□ -1.06
NPHP3-208ENST00000490993 TMOD2Q9NZR1 351 aa8.45□□□□□ -1.06
NPHP3-208ENST00000490993 HLA-DOAP06340 250 aa8.45□□□□□ -1.06
NPHP3-208ENST00000490993 KRT2P35908 639 aa8.45□□□□□ -1.06
NPHP3-208ENST00000490993 SUSD4Q5VX71 490 aa8.45□□□□□ -1.06
NPHP3-208ENST00000490993 USPL1Q5W0Q7 1092 aa8.45□□□□□ -1.06
NPHP3-208ENST00000490993 ANO1Q5XXA6 986 aa8.45□□□□□ -1.06
NPHP3-208ENST00000490993 OSBP2Q969R2 916 aa8.45□□□□□ -1.06
NPHP3-208ENST00000490993 RGPD1P0DJD0 1748 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms