RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 CA12O43570 354 aa22.08■■□□□ 1.13
ABCF3-217ENST00000489719 KIF23Q02241 960 aaPredicted RBP22.08■■□□□ 1.13
ABCF3-217ENST00000489719 TFCP2Q12800 502 aa22.08■■□□□ 1.13
ABCF3-217ENST00000489719 TNFAIP1Q13829 316 aa22.08■■□□□ 1.13
ABCF3-217ENST00000489719 TNS4Q8IZW8 715 aa22.08■■□□□ 1.13
ABCF3-217ENST00000489719 ZNF70Q9UC06 446 aaPredicted RBP22.08■■□□□ 1.13
ABCF3-217ENST00000489719 DENND2AQ9ULE3 1009 aa22.08■■□□□ 1.13
ABCF3-217ENST00000489719 MAST3O60307 1309 aa22.07■■□□□ 1.12
ABCF3-217ENST00000489719 ZBTB7BO15156 539 aaPredicted RBP22.07■■□□□ 1.12
ABCF3-217ENST00000489719 SLC10A3P09131 477 aa22.07■■□□□ 1.12
ABCF3-217ENST00000489719 HSPA8P11142 646 aaKnown RBP22.07■■□□□ 1.12
ABCF3-217ENST00000489719 RLBP1P12271 317 aa22.07■■□□□ 1.12
ABCF3-217ENST00000489719 ATP8B2P98198 1209 aa22.07■■□□□ 1.12
ABCF3-217ENST00000489719 RASA3Q14644 834 aa22.07■■□□□ 1.12
ABCF3-217ENST00000489719 NEUROD6Q96NK8 337 aa22.07■■□□□ 1.12
ABCF3-217ENST00000489719 ZIC5Q96T25 663 aa22.07■■□□□ 1.12
ABCF3-217ENST00000489719 SEMA3EO15041 775 aa22.06■■□□□ 1.12
ABCF3-217ENST00000489719 PPP1R12BO60237 982 aaPredicted RBP22.06■■□□□ 1.12
ABCF3-217ENST00000489719 PHKA1P46020 1223 aa22.06■■□□□ 1.12
ABCF3-217ENST00000489719 SPDYE2Q495Y8 402 aa22.06■■□□□ 1.12
ABCF3-217ENST00000489719 CCDC102BQ68D86 513 aa22.06■■□□□ 1.12
ABCF3-217ENST00000489719 ANGEL1Q9UNK9 670 aaKnown RBP22.06■■□□□ 1.12
ABCF3-217ENST00000489719 A0A1B0GUL6 1792 aa22.06■■□□□ 1.12
ABCF3-217ENST00000489719 A0A1B0GUL7 405 aa22.05■■□□□ 1.12
ABCF3-217ENST00000489719 ADORA1P30542 326 aa22.05■■□□□ 1.12
ABCF3-217ENST00000489719 TNNI2P48788 182 aa22.05■■□□□ 1.12
ABCF3-217ENST00000489719 REM2Q8IYK8 340 aaPredicted RBP22.05■■□□□ 1.12
ABCF3-217ENST00000489719 AOX1Q06278 1338 aa22.05■■□□□ 1.12
ABCF3-217ENST00000489719 MVPQ14764 893 aaKnown RBP22.04■■□□□ 1.12
ABCF3-217ENST00000489719 GORABQ5T7V8 394 aa22.04■■□□□ 1.12
ABCF3-217ENST00000489719 RASAL3Q86YV0 1011 aa22.04■■□□□ 1.12
ABCF3-217ENST00000489719 PANK1Q8TE04 598 aa22.04■■□□□ 1.12
ABCF3-217ENST00000489719 XAGE2Q96GT9 111 aa22.04■■□□□ 1.12
ABCF3-217ENST00000489719 ZDHHC15Q96MV8 337 aa22.04■■□□□ 1.12
ABCF3-217ENST00000489719 C1orf115Q9H7X2 142 aa22.04■■□□□ 1.12
ABCF3-217ENST00000489719 TCP10L2B9ZVM9 353 aa22.03■■□□□ 1.12
ABCF3-217ENST00000489719 LDHBP07195 334 aaKnown RBP22.03■■□□□ 1.12
ABCF3-217ENST00000489719 OS9Q13438 667 aaPredicted RBP22.03■■□□□ 1.12
ABCF3-217ENST00000489719 NBPF12Q5TAG4 269 aaPredicted RBP22.03■■□□□ 1.12
ABCF3-217ENST00000489719 HHIPL2Q6UWX4 724 aa22.03■■□□□ 1.12
ABCF3-217ENST00000489719 TMOD2Q9NZR1 351 aa22.03■■□□□ 1.12
ABCF3-217ENST00000489719 RCAN3Q9UKA8 241 aa22.03■■□□□ 1.12
ABCF3-217ENST00000489719 ZNF646O15015 1829 aaPredicted RBP22.03■■□□□ 1.12
ABCF3-217ENST00000489719 COL1A1P02452 1464 aaPredicted RBP22.03■■□□□ 1.12
ABCF3-217ENST00000489719 SURF6O75683 361 aaKnown RBP22.02■■□□□ 1.12
ABCF3-217ENST00000489719 POLA2Q14181 598 aa22.02■■□□□ 1.12
ABCF3-217ENST00000489719 ZGPATQ8N5A5 531 aaKnown RBP22.02■■□□□ 1.12
ABCF3-217ENST00000489719 SSH3Q8TE77 659 aa22.02■■□□□ 1.12
ABCF3-217ENST00000489719 SLC10A4Q96EP9 437 aa22.02■■□□□ 1.12
ABCF3-217ENST00000489719 CSRNP1Q96S65 589 aa22.02■■□□□ 1.12
ABCF3-217ENST00000489719 TSKSQ9UJT2 592 aa22.02■■□□□ 1.12
ABCF3-217ENST00000489719 LDLRAD1Q5T700 205 aa22.01■■□□□ 1.11
ABCF3-217ENST00000489719 APOBEC3HQ6NTF7 200 aaKnown RBP22.01■■□□□ 1.11
ABCF3-217ENST00000489719 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.01■■□□□ 1.11
ABCF3-217ENST00000489719 ZBTB22O15209 634 aa22■■□□□ 1.11
ABCF3-217ENST00000489719 IREB2P48200 963 aaKnown RBP22■■□□□ 1.11
ABCF3-217ENST00000489719 FZD1Q9UP38 647 aa22■■□□□ 1.11
ABCF3-217ENST00000489719 MAP3K11Q16584 847 aa21.99■■□□□ 1.11
ABCF3-217ENST00000489719 SPTY2D1Q68D10 685 aaPredicted RBP21.99■■□□□ 1.11
ABCF3-217ENST00000489719 SALL1Q9NSC2 1324 aa21.99■■□□□ 1.11
ABCF3-217ENST00000489719 PAPPA2Q9BXP8 1791 aa21.98■■□□□ 1.11
ABCF3-217ENST00000489719 UNCXA6NJT0 531 aa21.98■■□□□ 1.11
ABCF3-217ENST00000489719 PRDX5P30044 214 aa21.98■■□□□ 1.11
ABCF3-217ENST00000489719 ABCF2Q9UG63 623 aa21.98■■□□□ 1.11
ABCF3-217ENST00000489719 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.98■■□□□ 1.11
ABCF3-217ENST00000489719 USP2O75604 605 aaPredicted RBP21.97■■□□□ 1.11
ABCF3-217ENST00000489719 TRPA1O75762 1119 aa21.97■■□□□ 1.11
ABCF3-217ENST00000489719 CACNB3P54284 484 aa21.97■■□□□ 1.11
ABCF3-217ENST00000489719 MKRN3Q13064 507 aaKnown RBP21.97■■□□□ 1.11
ABCF3-217ENST00000489719 RASGRF1Q13972 1273 aa21.97■■□□□ 1.11
ABCF3-217ENST00000489719 FKBP1CQ5VVH2 108 aa21.97■■□□□ 1.11
ABCF3-217ENST00000489719 SLF2Q8IX21 1173 aa21.97■■□□□ 1.11
ABCF3-217ENST00000489719 TMEM39BQ9GZU3 492 aa21.97■■□□□ 1.11
ABCF3-217ENST00000489719 CHMP4BQ9H444 224 aaKnown RBP21.97■■□□□ 1.11
ABCF3-217ENST00000489719 GPR108Q9NPR9 543 aa21.97■■□□□ 1.11
ABCF3-217ENST00000489719 RNF186Q9NXI6 227 aa21.97■■□□□ 1.11
ABCF3-217ENST00000489719 SAGE1Q9NXZ1 904 aa21.97■■□□□ 1.11
ABCF3-217ENST00000489719 DIXDC1Q155Q3 683 aa21.96■■□□□ 1.11
ABCF3-217ENST00000489719 FAM83AQ86UY5 434 aa21.96■■□□□ 1.11
ABCF3-217ENST00000489719 TEPSINQ96N21 525 aa21.96■■□□□ 1.11
ABCF3-217ENST00000489719 NOP58Q9Y2X3 529 aaKnown RBP21.96■■□□□ 1.11
ABCF3-217ENST00000489719 DAGLAQ9Y4D2 1042 aa21.96■■□□□ 1.11
ABCF3-217ENST00000489719 UQCRFS1P1P0C7P4 283 aa21.95■■□□□ 1.1
ABCF3-217ENST00000489719 CEP85Q6P2H3 762 aa21.95■■□□□ 1.1
ABCF3-217ENST00000489719 DZIP1Q86YF9 867 aaKnown RBP21.95■■□□□ 1.1
ABCF3-217ENST00000489719 ANKRD13AQ8IZ07 590 aa21.95■■□□□ 1.1
ABCF3-217ENST00000489719 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.95■■□□□ 1.1
ABCF3-217ENST00000489719 HOOK2Q96ED9 719 aa21.95■■□□□ 1.1
ABCF3-217ENST00000489719 USP40Q9NVE5 1235 aa21.95■■□□□ 1.1
ABCF3-217ENST00000489719 DDX19BQ9UMR2 479 aa21.95■■□□□ 1.1
ABCF3-217ENST00000489719 COG6Q9Y2V7 657 aa21.95■■□□□ 1.1
ABCF3-217ENST00000489719 PDS5AQ29RF7 1337 aaKnown RBP21.95■■□□□ 1.1
ABCF3-217ENST00000489719 TNNI3KQ59H18 835 aa21.94■■□□□ 1.1
ABCF3-217ENST00000489719 CCDC158Q5M9N0 1113 aa21.94■■□□□ 1.1
ABCF3-217ENST00000489719 SPRYD7Q5W111 196 aa21.94■■□□□ 1.1
ABCF3-217ENST00000489719 ERICH6Q7L0X2 663 aa21.94■■□□□ 1.1
ABCF3-217ENST00000489719 SPATA5Q8NB90 893 aa21.94■■□□□ 1.1
ABCF3-217ENST00000489719 FPGT-TNNI3KV9GXZ4 949 aa21.94■■□□□ 1.1
ABCF3-217ENST00000489719 THSD7BQ9C0I4 1608 aa21.94■■□□□ 1.1
ABCF3-217ENST00000489719 TM4SF4P48230 202 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms