RNA–Protein interactions for RNA: ENST00000487445.6

GCA-210, Transcript of grancalcin, humanhuman

TSL 5

Gene GCA, Length 1,808 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-210ENST00000487445 ANP32AP39687 249 aaKnown RBP17.4■□□□□ 0.38
GCA-210ENST00000487445 ZNF384Q8TF68 577 aa17.4■□□□□ 0.38
GCA-210ENST00000487445 F8W031 263 aaPredicted RBP17.39■□□□□ 0.37
GCA-210ENST00000487445 NFKBIEO00221 500 aa17.39■□□□□ 0.37
GCA-210ENST00000487445 MBD4O95243 580 aa17.39■□□□□ 0.37
GCA-210ENST00000487445 IARSP41252 1262 aaKnown RBP17.39■□□□□ 0.37
GCA-210ENST00000487445 MAP4K1Q92918 833 aa17.39■□□□□ 0.37
GCA-210ENST00000487445 ARMT1Q9H993 441 aa17.39■□□□□ 0.37
GCA-210ENST00000487445 RBM8AQ9Y5S9 174 aaKnown RBP17.39■□□□□ 0.37
GCA-210ENST00000487445 DLEC1Q9Y238 1755 aa17.38■□□□□ 0.37
GCA-210ENST00000487445 SOCS7O14512 581 aa17.38■□□□□ 0.37
GCA-210ENST00000487445 HSPD1P10809 573 aaKnown RBP17.38■□□□□ 0.37
GCA-210ENST00000487445 MAGEB6P1A0A0J9YX57 407 aa17.37■□□□□ 0.37
GCA-210ENST00000487445 EPB41L2O43491 1005 aaKnown RBP17.37■□□□□ 0.37
GCA-210ENST00000487445 APPP05067 770 aa17.37■□□□□ 0.37
GCA-210ENST00000487445 DIXDC1Q155Q3 683 aa17.37■□□□□ 0.37
GCA-210ENST00000487445 KIAA1551Q9HCM1 1747 aa17.37■□□□□ 0.37
GCA-210ENST00000487445 USP17L3A6NCW0 530 aa17.37■□□□□ 0.37
GCA-210ENST00000487445 USP17L4A6NCW7 530 aa17.37■□□□□ 0.37
GCA-210ENST00000487445 YDJCA8MPS7 323 aa17.37■□□□□ 0.37
GCA-210ENST00000487445 HSPA4P34932 840 aa17.37■□□□□ 0.37
GCA-210ENST00000487445 RASSF7Q02833 373 aa17.37■□□□□ 0.37
GCA-210ENST00000487445 STRIP1Q5VSL9 837 aa17.37■□□□□ 0.37
GCA-210ENST00000487445 USP17L1Q7RTZ2 530 aa17.37■□□□□ 0.37
GCA-210ENST00000487445 NIM1KQ8IY84 436 aa17.37■□□□□ 0.37
GCA-210ENST00000487445 LCORLQ8N3X6 602 aa17.37■□□□□ 0.37
GCA-210ENST00000487445 CERS5Q8N5B7 392 aa17.37■□□□□ 0.37
GCA-210ENST00000487445 STRBPQ96SI9 672 aaKnown RBP17.37■□□□□ 0.37
GCA-210ENST00000487445 VPS33BQ9H267 617 aa17.37■□□□□ 0.37
GCA-210ENST00000487445 PALD1Q9ULE6 856 aa17.37■□□□□ 0.37
GCA-210ENST00000487445 AK9Q5TCS8 1911 aa17.36■□□□□ 0.37
GCA-210ENST00000487445 DYNLL1P63167 89 aaKnown RBP17.36■□□□□ 0.37
GCA-210ENST00000487445 GSTO1P78417 241 aa17.36■□□□□ 0.37
GCA-210ENST00000487445 ARHGAP27Q6ZUM4 889 aa17.36■□□□□ 0.37
GCA-210ENST00000487445 JDP2Q8WYK2 163 aa17.36■□□□□ 0.37
GCA-210ENST00000487445 DSCC1Q9BVC3 393 aa17.36■□□□□ 0.37
GCA-210ENST00000487445 AATFQ9NY61 560 aaKnown RBP eCLIP17.36■□□□□ 0.37
GCA-210ENST00000487445 RAD17O75943 681 aa17.35■□□□□ 0.37
GCA-210ENST00000487445 U3KPZ7 1027 aaPredicted RBP17.35■□□□□ 0.37
GCA-210ENST00000487445 LDHCP07864 332 aa17.35■□□□□ 0.37
GCA-210ENST00000487445 NECTIN1Q15223 517 aa17.35■□□□□ 0.37
GCA-210ENST00000487445 DACT2Q5SW24 774 aa17.35■□□□□ 0.37
GCA-210ENST00000487445 KIF2CQ99661 725 aa17.35■□□□□ 0.37
GCA-210ENST00000487445 TTF2Q9UNY4 1162 aaKnown RBP17.35■□□□□ 0.37
GCA-210ENST00000487445 SLC4A4Q9Y6R1 1079 aa17.35■□□□□ 0.37
GCA-210ENST00000487445 PRKAB2O43741 272 aa17.34■□□□□ 0.37
GCA-210ENST00000487445 CREB3L3Q68CJ9 461 aa17.34■□□□□ 0.37
GCA-210ENST00000487445 KIAA0825Q8IV33 1275 aa17.34■□□□□ 0.37
GCA-210ENST00000487445 RIOK1Q9BRS2 568 aaKnown RBP17.34■□□□□ 0.37
GCA-210ENST00000487445 ZNRF3Q9ULT6 936 aa17.34■□□□□ 0.37
GCA-210ENST00000487445 FOXP2O15409 715 aa17.33■□□□□ 0.37
GCA-210ENST00000487445 IGSF3O75054 1194 aa17.33■□□□□ 0.37
GCA-210ENST00000487445 ZKSCAN1P17029 563 aaPredicted RBP17.33■□□□□ 0.37
GCA-210ENST00000487445 SCNN1DP51172 638 aa17.33■□□□□ 0.37
GCA-210ENST00000487445 RNF20Q5VTR2 975 aa17.33■□□□□ 0.37
GCA-210ENST00000487445 RASEFQ8IZ41 740 aa17.33■□□□□ 0.37
GCA-210ENST00000487445 NOL10Q9BSC4 688 aaKnown RBP17.33■□□□□ 0.37
GCA-210ENST00000487445 SUGT1Q9Y2Z0 365 aa17.33■□□□□ 0.37
GCA-210ENST00000487445 UTRNP46939 3433 aa17.33■□□□□ 0.36
GCA-210ENST00000487445 PATL2C9JE40 543 aaKnown RBP17.33■□□□□ 0.36
GCA-210ENST00000487445 SLC27A2O14975 620 aa17.33■□□□□ 0.36
GCA-210ENST00000487445 FGAP02671 866 aa17.33■□□□□ 0.36
GCA-210ENST00000487445 TMED8Q6PL24 325 aaPredicted RBP17.33■□□□□ 0.36
GCA-210ENST00000487445 SLF2Q8IX21 1173 aa17.33■□□□□ 0.36
GCA-210ENST00000487445 SNX14Q9Y5W7 946 aa17.33■□□□□ 0.36
GCA-210ENST00000487445 BAG3O95817 575 aa17.32■□□□□ 0.36
GCA-210ENST00000487445 GNAT2P19087 354 aa17.32■□□□□ 0.36
GCA-210ENST00000487445 SDR42E1Q8WUS8 393 aa17.32■□□□□ 0.36
GCA-210ENST00000487445 MROH7-TTC4A0A0A0MT08 1334 aa17.32■□□□□ 0.36
GCA-210ENST00000487445 PSMD14O00487 310 aa17.31■□□□□ 0.36
GCA-210ENST00000487445 BTDP43251 543 aa17.31■□□□□ 0.36
GCA-210ENST00000487445 ANAPC15P60006 121 aa17.31■□□□□ 0.36
GCA-210ENST00000487445 CTNNA3Q9UI47 895 aa17.31■□□□□ 0.36
GCA-210ENST00000487445 LTBP3Q9NS15 1303 aa17.31■□□□□ 0.36
GCA-210ENST00000487445 GSG1L2A8MUP6 293 aa17.31■□□□□ 0.36
GCA-210ENST00000487445 CYP21A2P08686 494 aa17.31■□□□□ 0.36
GCA-210ENST00000487445 PRELPP51888 382 aa17.31■□□□□ 0.36
GCA-210ENST00000487445 FKBP1AP62942 108 aaKnown RBP17.31■□□□□ 0.36
GCA-210ENST00000487445 IFNL3Q8IZI9 196 aa17.31■□□□□ 0.36
GCA-210ENST00000487445 NACAP1Q9BZK3 213 aa17.31■□□□□ 0.36
GCA-210ENST00000487445 NAPBQ9H115 298 aa17.31■□□□□ 0.36
GCA-210ENST00000487445 TDO2P48775 406 aa17.3■□□□□ 0.36
GCA-210ENST00000487445 HAND2P61296 217 aa17.3■□□□□ 0.36
GCA-210ENST00000487445 CXCL9Q07325 125 aa17.3■□□□□ 0.36
GCA-210ENST00000487445 CRNKL1Q9BZJ0 848 aaKnown RBP17.3■□□□□ 0.36
GCA-210ENST00000487445 ZBTB12Q9Y330 459 aaPredicted RBP17.3■□□□□ 0.36
GCA-210ENST00000487445 TAF6LQ9Y6J9 622 aa17.3■□□□□ 0.36
GCA-210ENST00000487445 COL4A5P29400 1685 aa17.29■□□□□ 0.36
GCA-210ENST00000487445 YBX3P16989 372 aaKnown RBP eCLIP17.29■□□□□ 0.36
GCA-210ENST00000487445 RBM5P52756 815 aaKnown RBP eCLIP17.29■□□□□ 0.36
GCA-210ENST00000487445 RABEP1Q15276 862 aa17.29■□□□□ 0.36
GCA-210ENST00000487445 IMMTQ16891 758 aaKnown RBP17.29■□□□□ 0.36
GCA-210ENST00000487445 RSBN1LQ6PCB5 846 aaPredicted RBP17.29■□□□□ 0.36
GCA-210ENST00000487445 SH3RF3Q8TEJ3 882 aaPredicted RBP17.29■□□□□ 0.36
GCA-210ENST00000487445 TEKT1Q969V4 418 aa17.29■□□□□ 0.36
GCA-210ENST00000487445 FAM163AQ96GL9 167 aaPredicted RBP17.29■□□□□ 0.36
GCA-210ENST00000487445 EPB41L4AQ9HCS5 686 aaPredicted RBP17.29■□□□□ 0.36
GCA-210ENST00000487445 DAGLAQ9Y4D2 1042 aa17.29■□□□□ 0.36
GCA-210ENST00000487445 GPR75-ASB3A0A0A6YYF3 556 aa17.28■□□□□ 0.36
GCA-210ENST00000487445 ZNF213O14771 459 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms