RNA–Protein interactions for RNA: ENST00000486724.5

APTX-228, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 556 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-228ENST00000486724 CSADQ9Y600 493 aa10.93□□□□□ -0.66
APTX-228ENST00000486724 CLRN2A0PK11 232 aa10.92□□□□□ -0.66
APTX-228ENST00000486724 SPDYE5A6NIY4 337 aa10.92□□□□□ -0.66
APTX-228ENST00000486724 IRS4O14654 1257 aaPredicted RBP10.92□□□□□ -0.66
APTX-228ENST00000486724 ADCY3O60266 1144 aa10.92□□□□□ -0.66
APTX-228ENST00000486724 ANXA1P04083 346 aa10.92□□□□□ -0.66
APTX-228ENST00000486724 FCGRTP55899 365 aa10.92□□□□□ -0.66
APTX-228ENST00000486724 AIMP1Q12904 312 aaKnown RBP10.92□□□□□ -0.66
APTX-228ENST00000486724 TTLL5Q6EMB2 1281 aa10.92□□□□□ -0.66
APTX-228ENST00000486724 COPS6Q7L5N1 327 aa10.92□□□□□ -0.66
APTX-228ENST00000486724 COA1Q9GZY4 146 aa10.92□□□□□ -0.66
APTX-228ENST00000486724 SEC31BQ9NQW1 1179 aa10.92□□□□□ -0.66
APTX-228ENST00000486724 DDX60LQ5H9U9 1706 aaKnown RBP10.92□□□□□ -0.66
APTX-228ENST00000486724 DNAH12Q6ZR08 3092 aa10.91□□□□□ -0.66
APTX-228ENST00000486724 MYBBP1AQ9BQG0 1328 aaKnown RBP10.91□□□□□ -0.66
APTX-228ENST00000486724 CACNA1AO00555 2505 aa10.91□□□□□ -0.66
APTX-228ENST00000486724 ELNP15502 786 aa10.91□□□□□ -0.66
APTX-228ENST00000486724 SNAPC2Q13487 334 aa10.91□□□□□ -0.66
APTX-228ENST00000486724 RASA3Q14644 834 aa10.91□□□□□ -0.66
APTX-228ENST00000486724 RTL5Q5HYW3 569 aaPredicted RBP10.91□□□□□ -0.66
APTX-228ENST00000486724 PXYLP1Q8TE99 480 aa10.91□□□□□ -0.66
APTX-228ENST00000486724 XAGE3Q8WTP9 111 aa10.91□□□□□ -0.66
APTX-228ENST00000486724 SEMA6BQ9H3T3 888 aa10.91□□□□□ -0.66
APTX-228ENST00000486724 MGAMO43451 1857 aa10.91□□□□□ -0.66
APTX-228ENST00000486724 SPDYE2BA6NHP3 402 aa10.9□□□□□ -0.66
APTX-228ENST00000486724 SPDYE6P0CI01 402 aa10.9□□□□□ -0.66
APTX-228ENST00000486724 EIF2S2P20042 333 aaKnown RBP10.9□□□□□ -0.66
APTX-228ENST00000486724 MAP3K9P80192 1104 aa10.9□□□□□ -0.66
APTX-228ENST00000486724 MDM2Q00987 491 aaPredicted RBP10.9□□□□□ -0.66
APTX-228ENST00000486724 TNFAIP1Q13829 316 aa10.9□□□□□ -0.66
APTX-228ENST00000486724 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.9□□□□□ -0.66
APTX-228ENST00000486724 C1QTNF1Q9BXJ1 281 aa10.9□□□□□ -0.66
APTX-228ENST00000486724 C11orf49Q9H6J7 331 aa10.9□□□□□ -0.66
APTX-228ENST00000486724 GABRQQ9UN88 632 aa10.9□□□□□ -0.66
APTX-228ENST00000486724 HSP90B1P14625 803 aaKnown RBP10.89□□□□□ -0.67
APTX-228ENST00000486724 CCDC152Q4G0S7 254 aa10.89□□□□□ -0.67
APTX-228ENST00000486724 CC2D1BQ5T0F9 858 aaKnown RBP10.89□□□□□ -0.67
APTX-228ENST00000486724 ANKRD18AQ8IVF6 992 aa10.89□□□□□ -0.67
APTX-228ENST00000486724 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.89□□□□□ -0.67
APTX-228ENST00000486724 IRF6O14896 467 aa10.88□□□□□ -0.67
APTX-228ENST00000486724 FLT3LGP49771 235 aa10.88□□□□□ -0.67
APTX-228ENST00000486724 GTF2IP78347 998 aa10.88□□□□□ -0.67
APTX-228ENST00000486724 IRF5Q13568 498 aa10.88□□□□□ -0.67
APTX-228ENST00000486724 CFAP100Q494V2 611 aa10.88□□□□□ -0.67
APTX-228ENST00000486724 ANKRD23Q86SG2 305 aa10.88□□□□□ -0.67
APTX-228ENST00000486724 ERO1BQ86YB8 467 aa10.88□□□□□ -0.67
APTX-228ENST00000486724 ADAMTS19Q8TE59 1207 aa10.88□□□□□ -0.67
APTX-228ENST00000486724 ARAP2Q8WZ64 1704 aa10.88□□□□□ -0.67
APTX-228ENST00000486724 ISCA1Q9BUE6 129 aa10.88□□□□□ -0.67
APTX-228ENST00000486724 PCDHAC2Q9Y5I4 1007 aa10.88□□□□□ -0.67
APTX-228ENST00000486724 PDHXO00330 501 aa10.87□□□□□ -0.67
APTX-228ENST00000486724 PPIL2Q13356 520 aa10.87□□□□□ -0.67
APTX-228ENST00000486724 PRMT6Q96LA8 375 aaPredicted RBP10.87□□□□□ -0.67
APTX-228ENST00000486724 SNCAIPQ9Y6H5 919 aa10.87□□□□□ -0.67
APTX-228ENST00000486724 FANCIQ9NVI1 1328 aa10.86□□□□□ -0.67
APTX-228ENST00000486724 NCOR1O75376 2440 aa10.86□□□□□ -0.67
APTX-228ENST00000486724 DLG5Q8TDM6 1919 aa10.86□□□□□ -0.67
APTX-228ENST00000486724 ATP5J2-PTCD1G3V325 749 aa10.86□□□□□ -0.67
APTX-228ENST00000486724 BCRP11274 1271 aa10.86□□□□□ -0.67
APTX-228ENST00000486724 CCT4P50991 539 aaKnown RBP10.86□□□□□ -0.67
APTX-228ENST00000486724 CNGB1Q14028 1251 aaPredicted RBP10.86□□□□□ -0.67
APTX-228ENST00000486724 USP38Q8NB14 1042 aa10.86□□□□□ -0.67
APTX-228ENST00000486724 PLBD2Q8NHP8 589 aa10.86□□□□□ -0.67
APTX-228ENST00000486724 ATXN2LQ8WWM7 1075 aaKnown RBP10.86□□□□□ -0.67
APTX-228ENST00000486724 UHRF1Q96T88 793 aaPredicted RBP10.86□□□□□ -0.67
APTX-228ENST00000486724 PARK7Q99497 189 aaKnown RBP10.86□□□□□ -0.67
APTX-228ENST00000486724 LBHD1Q9BQE6 289 aaPredicted RBP10.86□□□□□ -0.67
APTX-228ENST00000486724 TTYH1Q9H313 450 aaPredicted RBP10.86□□□□□ -0.67
APTX-228ENST00000486724 NUDCQ9Y266 331 aa10.86□□□□□ -0.67
APTX-228ENST00000486724 AOX1Q06278 1338 aa10.85□□□□□ -0.67
APTX-228ENST00000486724 U2AF1L5P0DN76 240 aaPredicted RBP10.85□□□□□ -0.67
APTX-228ENST00000486724 U2AF1Q01081 240 aaKnown RBP eCLIP10.85□□□□□ -0.672e-8■■■■■ 37
APTX-228ENST00000486724 TXNRD3Q86VQ6 643 aa10.85□□□□□ -0.67
APTX-228ENST00000486724 CDAN1Q8IWY9 1227 aa10.85□□□□□ -0.67
APTX-228ENST00000486724 CERS5Q8N5B7 392 aa10.85□□□□□ -0.67
APTX-228ENST00000486724 CFAP53Q96M91 514 aa10.85□□□□□ -0.67
APTX-228ENST00000486724 TEPSINQ96N21 525 aa10.85□□□□□ -0.67
APTX-228ENST00000486724 SPEF2Q9C093 1822 aa10.85□□□□□ -0.67
APTX-228ENST00000486724 PFASO15067 1338 aa10.84□□□□□ -0.67
APTX-228ENST00000486724 F8W031 263 aaPredicted RBP10.84□□□□□ -0.67
APTX-228ENST00000486724 TNPO2O14787 897 aaKnown RBP10.84□□□□□ -0.67
APTX-228ENST00000486724 PPP2R1AP30153 589 aa10.84□□□□□ -0.67
APTX-228ENST00000486724 RBM5P52756 815 aaKnown RBP eCLIP10.84□□□□□ -0.67
APTX-228ENST00000486724 SPDYE2Q495Y8 402 aa10.84□□□□□ -0.67
APTX-228ENST00000486724 ALYREFQ86V81 257 aaKnown RBP10.84□□□□□ -0.67
APTX-228ENST00000486724 ZBTB38Q8NAP3 1195 aaPredicted RBP10.84□□□□□ -0.67
APTX-228ENST00000486724 CCDC85AQ96PX6 553 aaPredicted RBP10.84□□□□□ -0.67
APTX-228ENST00000486724 ASB2Q96Q27 587 aa10.84□□□□□ -0.67
APTX-228ENST00000486724 CDC5LQ99459 802 aaKnown RBP10.84□□□□□ -0.67
APTX-228ENST00000486724 TAOK2Q9UL54 1235 aa10.84□□□□□ -0.67
APTX-228ENST00000486724 MINPP1Q9UNW1 487 aa10.84□□□□□ -0.67
APTX-228ENST00000486724 XIRP2A4UGR9 3374 aa10.83□□□□□ -0.67
APTX-228ENST00000486724 SMAD3P84022 425 aaKnown RBP10.83□□□□□ -0.68
APTX-228ENST00000486724 PPATQ06203 517 aa10.83□□□□□ -0.68
APTX-228ENST00000486724 TRIM28Q13263 835 aaKnown RBP10.83□□□□□ -0.68
APTX-228ENST00000486724 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.83□□□□□ -0.68
APTX-228ENST00000486724 IL27Q8NEV9 243 aa10.83□□□□□ -0.68
APTX-228ENST00000486724 ZKSCAN4Q969J2 545 aaPredicted RBP10.83□□□□□ -0.68
APTX-228ENST00000486724 WRNIP1Q96S55 665 aa10.83□□□□□ -0.68
APTX-228ENST00000486724 MRS2Q9HD23 443 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms