RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 ERICH6Q7L0X2 663 aa13.86□□□□□ -0.19
NUP50-216ENST00000486184 DZIP1Q86YF9 867 aaKnown RBP13.86□□□□□ -0.19
NUP50-216ENST00000486184 CERS5Q8N5B7 392 aa13.86□□□□□ -0.19
NUP50-216ENST00000486184 BOLA2Q9H3K6 86 aa13.86□□□□□ -0.19
NUP50-216ENST00000486184 RRAGCQ9HB90 399 aa13.86□□□□□ -0.19
NUP50-216ENST00000486184 LRP2BPQ9P2M1 347 aa13.86□□□□□ -0.19
NUP50-216ENST00000486184 TTF2Q9UNY4 1162 aaKnown RBP13.86□□□□□ -0.19
NUP50-216ENST00000486184 SUGT1Q9Y2Z0 365 aa13.86□□□□□ -0.19
NUP50-216ENST00000486184 UTRNP46939 3433 aa13.85□□□□□ -0.19
NUP50-216ENST00000486184 GLRX3O76003 335 aaKnown RBP13.85□□□□□ -0.19
NUP50-216ENST00000486184 EPHX2P34913 555 aa13.85□□□□□ -0.19
NUP50-216ENST00000486184 RBM5P52756 815 aaKnown RBP eCLIP13.85□□□□□ -0.19
NUP50-216ENST00000486184 TSHZ3Q63HK5 1081 aa13.85□□□□□ -0.19
NUP50-216ENST00000486184 SLF2Q8IX21 1173 aa13.85□□□□□ -0.19
NUP50-216ENST00000486184 OTUD7AQ8TE49 926 aaPredicted RBP13.85□□□□□ -0.19
NUP50-216ENST00000486184 NMRK2Q9NPI5 230 aa13.85□□□□□ -0.19
NUP50-216ENST00000486184 ADARB2Q9NS39 739 aaKnown RBP13.85□□□□□ -0.19
NUP50-216ENST00000486184 RAI14Q9P0K7 980 aa13.85□□□□□ -0.19
NUP50-216ENST00000486184 GOLIM4O00461 696 aa13.84□□□□□ -0.19
NUP50-216ENST00000486184 EPS15P42566 896 aa13.84□□□□□ -0.19
NUP50-216ENST00000486184 PDE1AP54750 535 aa13.84□□□□□ -0.19
NUP50-216ENST00000486184 EAPPQ56P03 285 aaPredicted RBP13.84□□□□□ -0.19
NUP50-216ENST00000486184 RBM26Q5T8P6 1007 aaKnown RBP13.84□□□□□ -0.19
NUP50-216ENST00000486184 TBC1D9Q6ZT07 1266 aa13.84□□□□□ -0.19
NUP50-216ENST00000486184 PNMA8AQ86V59 439 aaPredicted RBP13.84□□□□□ -0.19
NUP50-216ENST00000486184 GMLQ99445 158 aa13.84□□□□□ -0.19
NUP50-216ENST00000486184 HAUS7Q99871 368 aa13.84□□□□□ -0.19
NUP50-216ENST00000486184 PAG1Q9NWQ8 432 aa13.84□□□□□ -0.19
NUP50-216ENST00000486184 NDUFB9Q9Y6M9 179 aa13.84□□□□□ -0.19
NUP50-216ENST00000486184 AOX1Q06278 1338 aa13.84□□□□□ -0.19
NUP50-216ENST00000486184 IDH1O75874 414 aaKnown RBP13.83□□□□□ -0.2
NUP50-216ENST00000486184 CYP2E1P05181 493 aaPredicted RBP13.83□□□□□ -0.2
NUP50-216ENST00000486184 PRDX5P30044 214 aa13.83□□□□□ -0.2
NUP50-216ENST00000486184 GSTO1P78417 241 aa13.83□□□□□ -0.2
NUP50-216ENST00000486184 MAP3K12Q12852 859 aa13.83□□□□□ -0.2
NUP50-216ENST00000486184 MKRN4PQ13434 485 aaPredicted RBP13.83□□□□□ -0.2
NUP50-216ENST00000486184 DLGAP5Q15398 846 aa13.83□□□□□ -0.2
NUP50-216ENST00000486184 KIF4BQ2VIQ3 1234 aa13.83□□□□□ -0.2
NUP50-216ENST00000486184 TBC1D10BQ4KMP7 808 aaPredicted RBP13.83□□□□□ -0.2
NUP50-216ENST00000486184 ZNF784Q8NCA9 323 aaPredicted RBP13.83□□□□□ -0.2
NUP50-216ENST00000486184 TEKT1Q969V4 418 aa13.83□□□□□ -0.2
NUP50-216ENST00000486184 TAF1DQ9H5J8 278 aaPredicted RBP13.83□□□□□ -0.2
NUP50-216ENST00000486184 MYOZ2Q9NPC6 264 aa13.83□□□□□ -0.2
NUP50-216ENST00000486184 STAP2Q9UGK3 403 aa13.83□□□□□ -0.2
NUP50-216ENST00000486184 SALL3Q9BXA9 1300 aa13.83□□□□□ -0.2
NUP50-216ENST00000486184 SHTN1A0MZ66 631 aa13.82□□□□□ -0.2
NUP50-216ENST00000486184 MYO1BO43795 1136 aa13.82□□□□□ -0.2
NUP50-216ENST00000486184 IGSF3O75054 1194 aa13.82□□□□□ -0.2
NUP50-216ENST00000486184 ZNF280AP59817 542 aaPredicted RBP13.82□□□□□ -0.2
NUP50-216ENST00000486184 USP50Q70EL3 339 aaPredicted RBP13.82□□□□□ -0.2
NUP50-216ENST00000486184 SAMD7Q7Z3H4 446 aa13.82□□□□□ -0.2
NUP50-216ENST00000486184 PLEKHM2Q8IWE5 1019 aa13.82□□□□□ -0.2
NUP50-216ENST00000486184 NOL10Q9BSC4 688 aaKnown RBP13.82□□□□□ -0.2
NUP50-216ENST00000486184 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.82□□□□□ -0.2
NUP50-216ENST00000486184 SERPINA10Q9UK55 444 aa13.82□□□□□ -0.2
NUP50-216ENST00000486184 CLEC11AQ9Y240 323 aa13.82□□□□□ -0.2
NUP50-216ENST00000486184 TRIM6-TRIM34B2RNG4 842 aa13.81□□□□□ -0.2
NUP50-216ENST00000486184 MAP4K4O95819 1239 aaPredicted RBP13.81□□□□□ -0.2
NUP50-216ENST00000486184 LDHCP07864 332 aa13.81□□□□□ -0.2
NUP50-216ENST00000486184 CRKP46108 304 aa13.81□□□□□ -0.2
NUP50-216ENST00000486184 HDLBPQ00341 1268 aaKnown RBP13.81□□□□□ -0.2
NUP50-216ENST00000486184 GRIK5Q16478 980 aa13.81□□□□□ -0.2
NUP50-216ENST00000486184 LRRFIP1Q32MZ4 808 aaKnown RBP13.81□□□□□ -0.2
NUP50-216ENST00000486184 CFAP100Q494V2 611 aa13.81□□□□□ -0.2
NUP50-216ENST00000486184 NAA16Q6N069 864 aaPredicted RBP13.81□□□□□ -0.2
NUP50-216ENST00000486184 ZSCAN25Q6NSZ9 544 aa13.81□□□□□ -0.2
NUP50-216ENST00000486184 PI4K2BQ8TCG2 481 aa13.81□□□□□ -0.2
NUP50-216ENST00000486184 ANTXR1Q9H6X2 564 aa13.81□□□□□ -0.2
NUP50-216ENST00000486184 PIH1D3Q9NQM4 214 aaKnown RBP13.81□□□□□ -0.2
NUP50-216ENST00000486184 POLR2AP24928 1970 aaKnown RBP13.8□□□□□ -0.2
NUP50-216ENST00000486184 POTECB2RU33 542 aa13.8□□□□□ -0.2
NUP50-216ENST00000486184 PDE4AP27815 886 aa13.8□□□□□ -0.2
NUP50-216ENST00000486184 MECOMQ03112 1051 aa13.8□□□□□ -0.2
NUP50-216ENST00000486184 FSD1Q9BTV5 496 aa13.8□□□□□ -0.2
NUP50-216ENST00000486184 OSBPL3Q9H4L5 887 aa13.8□□□□□ -0.2
NUP50-216ENST00000486184 DIXDC1Q155Q3 683 aa13.79□□□□□ -0.2
NUP50-216ENST00000486184 TMED8Q6PL24 325 aaPredicted RBP13.79□□□□□ -0.2
NUP50-216ENST00000486184 HHIPL2Q6UWX4 724 aa13.79□□□□□ -0.2
NUP50-216ENST00000486184 CNTROBQ8N137 903 aa13.79□□□□□ -0.2
NUP50-216ENST00000486184 MAGEB6Q8N7X4 407 aa13.79□□□□□ -0.2
NUP50-216ENST00000486184 TRPM4Q8TD43 1214 aa13.79□□□□□ -0.2
NUP50-216ENST00000486184 NSUN4Q96CB9 384 aaKnown RBP13.79□□□□□ -0.2
NUP50-216ENST00000486184 EDC3Q96F86 508 aaKnown RBP13.79□□□□□ -0.2
NUP50-216ENST00000486184 MRIQ9BWK5 157 aa13.79□□□□□ -0.2
NUP50-216ENST00000486184 TMOD2Q9NZR1 351 aa13.79□□□□□ -0.2
NUP50-216ENST00000486184 CDK5RAP2Q96SN8 1893 aa13.78□□□□□ -0.2
NUP50-216ENST00000486184 RGS3P49796 1198 aa13.78□□□□□ -0.2
NUP50-216ENST00000486184 SLC9C2Q5TAH2 1124 aa13.78□□□□□ -0.2
NUP50-216ENST00000486184 LDHDQ86WU2 507 aa13.78□□□□□ -0.2
NUP50-216ENST00000486184 KBTBD3Q8NAB2 608 aa13.78□□□□□ -0.2
NUP50-216ENST00000486184 MTMR14Q8NCE2 650 aa13.78□□□□□ -0.2
NUP50-216ENST00000486184 RILPL2Q969X0 211 aa13.78□□□□□ -0.2
NUP50-216ENST00000486184 EVI5LQ96CN4 794 aa13.78□□□□□ -0.2
NUP50-216ENST00000486184 ZDHHC15Q96MV8 337 aa13.78□□□□□ -0.2
NUP50-216ENST00000486184 MROH7-TTC4A0A0A0MT08 1334 aa13.78□□□□□ -0.2
NUP50-216ENST00000486184 SPDYE2BA6NHP3 402 aa13.77□□□□□ -0.21
NUP50-216ENST00000486184 WNT10BO00744 389 aa13.77□□□□□ -0.21
NUP50-216ENST00000486184 BAG3O95817 575 aa13.77□□□□□ -0.21
NUP50-216ENST00000486184 EGFRP00533 1210 aa13.77□□□□□ -0.21
NUP50-216ENST00000486184 SPDYE6P0CI01 402 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms