RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 CST9Q5W186 159 aa15.3■□□□□ 0.04
HMG20B-211ENST00000486028 ZGPATQ8N5A5 531 aaKnown RBP15.3■□□□□ 0.04
HMG20B-211ENST00000486028 MRIQ9BWK5 157 aa15.3■□□□□ 0.04
HMG20B-211ENST00000486028 PDS5AQ29RF7 1337 aaKnown RBP15.29■□□□□ 0.04
HMG20B-211ENST00000486028 SALL1Q9NSC2 1324 aa15.29■□□□□ 0.04
HMG20B-211ENST00000486028 CRKP46108 304 aa15.29■□□□□ 0.04
HMG20B-211ENST00000486028 CCDC158Q5M9N0 1113 aa15.29■□□□□ 0.04
HMG20B-211ENST00000486028 APOBEC3FQ8IUX4 373 aaKnown RBP15.29■□□□□ 0.04
HMG20B-211ENST00000486028 DNAJC5GQ8N7S2 189 aa15.29■□□□□ 0.04
HMG20B-211ENST00000486028 RHPN1Q8TCX5 695 aa15.29■□□□□ 0.04
HMG20B-211ENST00000486028 TEKT1Q969V4 418 aa15.29■□□□□ 0.04
HMG20B-211ENST00000486028 KIF1BPQ96EK5 621 aa15.29■□□□□ 0.04
HMG20B-211ENST00000486028 PRMT6Q96LA8 375 aaPredicted RBP15.29■□□□□ 0.04
HMG20B-211ENST00000486028 CRBNQ96SW2 442 aa15.29■□□□□ 0.04
HMG20B-211ENST00000486028 DBNDD2Q9BQY9 259 aa15.29■□□□□ 0.04
HMG20B-211ENST00000486028 ZNF408Q9H9D4 720 aa15.29■□□□□ 0.04
HMG20B-211ENST00000486028 ABT1Q9ULW3 272 aaKnown RBP15.29■□□□□ 0.04
HMG20B-211ENST00000486028 APBB1O00213 710 aa15.28■□□□□ 0.04
HMG20B-211ENST00000486028 LDHBP07195 334 aaKnown RBP15.28■□□□□ 0.04
HMG20B-211ENST00000486028 TTC39AQ5SRH9 613 aa15.28■□□□□ 0.04
HMG20B-211ENST00000486028 SPTY2D1Q68D10 685 aaPredicted RBP15.28■□□□□ 0.04
HMG20B-211ENST00000486028 CLASRPQ8N2M8 674 aaKnown RBP15.28■□□□□ 0.04
HMG20B-211ENST00000486028 EAF2Q96CJ1 260 aaPredicted RBP15.28■□□□□ 0.04
HMG20B-211ENST00000486028 ARID4AP29374 1257 aaPredicted RBP15.27■□□□□ 0.04
HMG20B-211ENST00000486028 DLK2Q6UY11 383 aa15.27■□□□□ 0.04
HMG20B-211ENST00000486028 AACSQ86V21 672 aa15.27■□□□□ 0.04
HMG20B-211ENST00000486028 SPATA5Q8NB90 893 aa15.27■□□□□ 0.04
HMG20B-211ENST00000486028 CDCA5Q96FF9 252 aa15.27■□□□□ 0.04
HMG20B-211ENST00000486028 ZDHHC15Q96MV8 337 aa15.27■□□□□ 0.04
HMG20B-211ENST00000486028 CCDC8Q9H0W5 538 aaPredicted RBP15.27■□□□□ 0.04
HMG20B-211ENST00000486028 HMG20BQ9P0W2 317 aa15.27■□□□□ 0.04
HMG20B-211ENST00000486028 SUPT16HQ9Y5B9 1047 aaKnown RBP15.27■□□□□ 0.04
HMG20B-211ENST00000486028 PCDHAC2Q9Y5I4 1007 aa15.27■□□□□ 0.04
HMG20B-211ENST00000486028 POLR2AP24928 1970 aaKnown RBP15.27■□□□□ 0.03
HMG20B-211ENST00000486028 COL1A1P02452 1464 aaPredicted RBP15.27■□□□□ 0.03
HMG20B-211ENST00000486028 CLRN2A0PK11 232 aa15.26■□□□□ 0.03
HMG20B-211ENST00000486028 AAMPQ13685 434 aa15.26■□□□□ 0.03
HMG20B-211ENST00000486028 HHIPL2Q6UWX4 724 aa15.26■□□□□ 0.03
HMG20B-211ENST00000486028 KLRG1Q96E93 195 aa15.26■□□□□ 0.03
HMG20B-211ENST00000486028 ZNF512BQ96KM6 892 aaPredicted RBP15.26■□□□□ 0.03
HMG20B-211ENST00000486028 IL1RAPL2Q9NP60 686 aa15.26■□□□□ 0.03
HMG20B-211ENST00000486028 ABCF2Q9UG63 623 aa15.26■□□□□ 0.03
HMG20B-211ENST00000486028 DBNLQ9UJU6 430 aaKnown RBP15.26■□□□□ 0.03
HMG20B-211ENST00000486028 SCAF8Q9UPN6 1271 aaKnown RBP15.26■□□□□ 0.03
HMG20B-211ENST00000486028 PRDX5P30044 214 aa15.25■□□□□ 0.03
HMG20B-211ENST00000486028 DEFB115Q30KQ5 88 aa15.25■□□□□ 0.03
HMG20B-211ENST00000486028 C2orf69Q8N8R5 385 aa15.25■□□□□ 0.03
HMG20B-211ENST00000486028 DEFB129Q9H1M3 183 aa15.25■□□□□ 0.03
HMG20B-211ENST00000486028 TDRD3Q9H7E2 651 aaKnown RBP15.25■□□□□ 0.03
HMG20B-211ENST00000486028 VEZTQ9HBM0 779 aa15.25■□□□□ 0.03
HMG20B-211ENST00000486028 ZNF70Q9UC06 446 aaPredicted RBP15.25■□□□□ 0.03
HMG20B-211ENST00000486028 MKRN1Q9UHC7 482 aaKnown RBP15.25■□□□□ 0.03
HMG20B-211ENST00000486028 PCDHB15Q9Y5E8 787 aa15.25■□□□□ 0.03
HMG20B-211ENST00000486028 TLL2Q9Y6L7 1015 aa15.25■□□□□ 0.03
HMG20B-211ENST00000486028 ARAP2Q8WZ64 1704 aa15.25■□□□□ 0.03
HMG20B-211ENST00000486028 IFIT2P09913 472 aaKnown RBP15.24■□□□□ 0.03
HMG20B-211ENST00000486028 PRKCSHP14314 528 aaPredicted RBP15.24■□□□□ 0.03
HMG20B-211ENST00000486028 NF2P35240 595 aa15.24■□□□□ 0.03
HMG20B-211ENST00000486028 MCAMP43121 646 aa15.24■□□□□ 0.03
HMG20B-211ENST00000486028 SPDYE2Q495Y8 402 aa15.24■□□□□ 0.03
HMG20B-211ENST00000486028 ERICH6Q7L0X2 663 aa15.24■□□□□ 0.03
HMG20B-211ENST00000486028 DZIP1Q86YF9 867 aaKnown RBP15.24■□□□□ 0.03
HMG20B-211ENST00000486028 SLF2Q8IX21 1173 aa15.24■□□□□ 0.03
HMG20B-211ENST00000486028 DCTPP1Q9H773 170 aa15.24■□□□□ 0.03
HMG20B-211ENST00000486028 GBA2Q9HCG7 927 aaPredicted RBP15.24■□□□□ 0.03
HMG20B-211ENST00000486028 TLR7Q9NYK1 1049 aaKnown RBP15.24■□□□□ 0.03
HMG20B-211ENST00000486028 PPP2R3BQ9Y5P8 575 aa15.24■□□□□ 0.03
HMG20B-211ENST00000486028 RASSF10A6NK89 507 aa15.23■□□□□ 0.03
HMG20B-211ENST00000486028 TNFAIP1Q13829 316 aa15.23■□□□□ 0.03
HMG20B-211ENST00000486028 PRAMEF18Q5VWM3 479 aa15.23■□□□□ 0.03
HMG20B-211ENST00000486028 APOBEC3HQ6NTF7 200 aaKnown RBP15.23■□□□□ 0.03
HMG20B-211ENST00000486028 PI16Q6UXB8 463 aa15.23■□□□□ 0.03
HMG20B-211ENST00000486028 SAPCD2Q86UD0 394 aa15.23■□□□□ 0.03
HMG20B-211ENST00000486028 LRRCC1Q9C099 1032 aa15.23■□□□□ 0.03
HMG20B-211ENST00000486028 BCL11AQ9H165 835 aa15.23■□□□□ 0.03
HMG20B-211ENST00000486028 SNRKQ9NRH2 765 aa15.23■□□□□ 0.03
HMG20B-211ENST00000486028 TMOD2Q9NZR1 351 aa15.23■□□□□ 0.03
HMG20B-211ENST00000486028 CNTNAP1P78357 1384 aa15.23■□□□□ 0.03
HMG20B-211ENST00000486028 TRPM7Q96QT4 1865 aa15.23■□□□□ 0.03
HMG20B-211ENST00000486028 AOX1Q06278 1338 aa15.22■□□□□ 0.03
HMG20B-211ENST00000486028 TNNI2P48788 182 aa15.22■□□□□ 0.03
HMG20B-211ENST00000486028 FKBP1BP68106 108 aa15.22■□□□□ 0.03
HMG20B-211ENST00000486028 DIXDC1Q155Q3 683 aa15.22■□□□□ 0.03
HMG20B-211ENST00000486028 TBC1D9Q6ZT07 1266 aa15.22■□□□□ 0.03
HMG20B-211ENST00000486028 FAM163AQ96GL9 167 aaPredicted RBP15.22■□□□□ 0.03
HMG20B-211ENST00000486028 HHIPL1Q96JK4 782 aa15.22■□□□□ 0.03
HMG20B-211ENST00000486028 LRP2BPQ9P2M1 347 aa15.22■□□□□ 0.03
HMG20B-211ENST00000486028 DAGLAQ9Y4D2 1042 aa15.22■□□□□ 0.03
HMG20B-211ENST00000486028 MYH13Q9UKX3 1938 aa15.21■□□□□ 0.03
HMG20B-211ENST00000486028 LDHCP07864 332 aa15.21■□□□□ 0.03
HMG20B-211ENST00000486028 ECE1P42892 770 aa15.21■□□□□ 0.03
HMG20B-211ENST00000486028 HUNKP57058 714 aa15.21■□□□□ 0.03
HMG20B-211ENST00000486028 GSTO1P78417 241 aa15.21■□□□□ 0.03
HMG20B-211ENST00000486028 RASA3Q14644 834 aa15.21■□□□□ 0.03
HMG20B-211ENST00000486028 SUPT20HL1Q3ZLR7 823 aa15.21■□□□□ 0.03
HMG20B-211ENST00000486028 FKBP1CQ5VVH2 108 aa15.21■□□□□ 0.03
HMG20B-211ENST00000486028 PAXIP1Q6ZW49 1069 aaPredicted RBP15.21■□□□□ 0.03
HMG20B-211ENST00000486028 IFNLR1Q8IU57 520 aaPredicted RBP15.21■□□□□ 0.03
HMG20B-211ENST00000486028 RAI14Q9P0K7 980 aa15.21■□□□□ 0.03
HMG20B-211ENST00000486028 TAOK2Q9UL54 1235 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms