RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 PARP3Q9Y6F1 533 aa9.32□□□□□ -0.92
SMC4-217ENST00000485867 THBS1P07996 1170 aa9.31□□□□□ -0.92
SMC4-217ENST00000485867 CTCFP49711 727 aaPredicted RBP9.31□□□□□ -0.92
SMC4-217ENST00000485867 VAC14Q08AM6 782 aa9.31□□□□□ -0.92
SMC4-217ENST00000485867 RRS1Q15050 365 aaKnown RBP9.31□□□□□ -0.92
SMC4-217ENST00000485867 SLFNL1Q499Z3 407 aa9.31□□□□□ -0.92
SMC4-217ENST00000485867 TRAPPC3LQ5T215 181 aa9.31□□□□□ -0.92
SMC4-217ENST00000485867 RNF135Q8IUD6 432 aa9.31□□□□□ -0.92
SMC4-217ENST00000485867 NUCKS1Q9H1E3 243 aaKnown RBP9.31□□□□□ -0.92
SMC4-217ENST00000485867 GDPD2Q9HCC8 539 aa9.31□□□□□ -0.92
SMC4-217ENST00000485867 RTCBQ9Y3I0 505 aaKnown RBP9.31□□□□□ -0.92
SMC4-217ENST00000485867 AFDNP55196 1824 aaKnown RBP9.31□□□□□ -0.92
SMC4-217ENST00000485867 NCAPD2Q15021 1401 aa9.31□□□□□ -0.92
SMC4-217ENST00000485867 INSRP06213 1382 aa9.3□□□□□ -0.92
SMC4-217ENST00000485867 CNTNAP1P78357 1384 aa9.3□□□□□ -0.92
SMC4-217ENST00000485867 MAP3K10Q02779 954 aa9.3□□□□□ -0.92
SMC4-217ENST00000485867 USP4Q13107 963 aa9.3□□□□□ -0.92
SMC4-217ENST00000485867 L3MBTL2Q969R5 705 aa9.3□□□□□ -0.92
SMC4-217ENST00000485867 ABHD8Q96I13 439 aa9.3□□□□□ -0.92
SMC4-217ENST00000485867 TRERF1Q96PN7 1200 aa9.3□□□□□ -0.92
SMC4-217ENST00000485867 ZSCAN10Q96SZ4 725 aaPredicted RBP9.3□□□□□ -0.92
SMC4-217ENST00000485867 TMOD3Q9NYL9 352 aa9.3□□□□□ -0.92
SMC4-217ENST00000485867 KIF20BQ96Q89 1820 aa9.29□□□□□ -0.92
SMC4-217ENST00000485867 STAU1O95793 577 aaKnown RBP9.29□□□□□ -0.92
SMC4-217ENST00000485867 CHRNA5P30532 468 aa9.29□□□□□ -0.92
SMC4-217ENST00000485867 MARSP56192 900 aaKnown RBP9.29□□□□□ -0.92
SMC4-217ENST00000485867 ETNK1Q9HBU6 452 aa9.29□□□□□ -0.92
SMC4-217ENST00000485867 CNTNAP4Q9C0A0 1308 aa9.29□□□□□ -0.92
SMC4-217ENST00000485867 A0A1B0GTH6 734 aa9.28□□□□□ -0.92
SMC4-217ENST00000485867 LMNB1P20700 586 aa9.28□□□□□ -0.92
SMC4-217ENST00000485867 RFC4P35249 363 aa9.28□□□□□ -0.92
SMC4-217ENST00000485867 IRS1P35568 1242 aa9.28□□□□□ -0.92
SMC4-217ENST00000485867 PHKA2P46019 1235 aa9.28□□□□□ -0.92
SMC4-217ENST00000485867 DDR1Q08345 913 aa9.28□□□□□ -0.92
SMC4-217ENST00000485867 AIDAQ96BJ3 306 aa9.28□□□□□ -0.92
SMC4-217ENST00000485867 SLC4A9Q96Q91 983 aa9.28□□□□□ -0.92
SMC4-217ENST00000485867 ATG3Q9NT62 314 aa9.28□□□□□ -0.92
SMC4-217ENST00000485867 ADAMTS7Q9UKP4 1686 aa9.28□□□□□ -0.92
SMC4-217ENST00000485867 NRXN2Q9P2S2 1712 aa9.28□□□□□ -0.92
SMC4-217ENST00000485867 FLT4P35916 1363 aa9.27□□□□□ -0.93
SMC4-217ENST00000485867 RPS6KA4O75676 772 aa9.27□□□□□ -0.93
SMC4-217ENST00000485867 ABL2P42684 1182 aa9.27□□□□□ -0.93
SMC4-217ENST00000485867 LBX1P52954 281 aa9.27□□□□□ -0.93
SMC4-217ENST00000485867 MLLT1Q03111 559 aaPredicted RBP9.27□□□□□ -0.93
SMC4-217ENST00000485867 MCM6Q14566 821 aa9.27□□□□□ -0.93
SMC4-217ENST00000485867 C4orf17Q53FE4 359 aa9.27□□□□□ -0.93
SMC4-217ENST00000485867 HSP90AB2PQ58FF8 381 aa9.27□□□□□ -0.93
SMC4-217ENST00000485867 OXLD1Q5BKU9 147 aa9.27□□□□□ -0.93
SMC4-217ENST00000485867 ACDQ96AP0 544 aa9.27□□□□□ -0.93
SMC4-217ENST00000485867 SCARF2Q96GP6 870 aaPredicted RBP9.27□□□□□ -0.93
SMC4-217ENST00000485867 GPAMQ9HCL2 828 aa9.27□□□□□ -0.93
SMC4-217ENST00000485867 ANKRD26Q9UPS8 1709 aa9.27□□□□□ -0.93
SMC4-217ENST00000485867 FER1L6Q2WGJ9 1857 aa9.27□□□□□ -0.93
SMC4-217ENST00000485867 MX2P20592 715 aa9.26□□□□□ -0.93
SMC4-217ENST00000485867 RGS19P49795 217 aa9.26□□□□□ -0.93
SMC4-217ENST00000485867 UBAP2LQ14157 1087 aaKnown RBP9.26□□□□□ -0.93
SMC4-217ENST00000485867 WASHC4Q2M389 1173 aa9.26□□□□□ -0.93
SMC4-217ENST00000485867 GNASQ5JWF2 1037 aa9.26□□□□□ -0.93
SMC4-217ENST00000485867 TMEM214Q6NUQ4 689 aaKnown RBP9.26□□□□□ -0.93
SMC4-217ENST00000485867 PUS7Q96PZ0 661 aaKnown RBP9.26□□□□□ -0.93
SMC4-217ENST00000485867 ENAMQ9NRM1 1142 aa9.26□□□□□ -0.93
SMC4-217ENST00000485867 SRP68Q9UHB9 627 aaKnown RBP9.26□□□□□ -0.93
SMC4-217ENST00000485867 KIF24Q5T7B8 1368 aa9.25□□□□□ -0.93
SMC4-217ENST00000485867 TJP1Q07157 1748 aa9.25□□□□□ -0.93
SMC4-217ENST00000485867 NFKBIEO00221 500 aa9.25□□□□□ -0.93
SMC4-217ENST00000485867 HSPA8P11142 646 aaKnown RBP9.25□□□□□ -0.93
SMC4-217ENST00000485867 BCRP11274 1271 aa9.25□□□□□ -0.93
SMC4-217ENST00000485867 SCNN1DP51172 638 aa9.25□□□□□ -0.93
SMC4-217ENST00000485867 KANK3Q6NY19 840 aa9.25□□□□□ -0.93
SMC4-217ENST00000485867 CFHR5Q9BXR6 569 aa9.25□□□□□ -0.93
SMC4-217ENST00000485867 SPG7Q9UQ90 795 aa9.25□□□□□ -0.93
SMC4-217ENST00000485867 USP42Q9H9J4 1324 aaKnown RBP9.25□□□□□ -0.93
SMC4-217ENST00000485867 SCN4AP35499 1836 aa9.24□□□□□ -0.93
SMC4-217ENST00000485867 POLRMTO00411 1230 aaKnown RBP9.24□□□□□ -0.93
SMC4-217ENST00000485867 PHKG2P15735 406 aa9.24□□□□□ -0.93
SMC4-217ENST00000485867 GTF2E1P29083 439 aaPredicted RBP9.24□□□□□ -0.93
SMC4-217ENST00000485867 MAP7D1Q3KQU3 841 aa9.24□□□□□ -0.93
SMC4-217ENST00000485867 RHBDD1Q8TEB9 315 aa9.24□□□□□ -0.93
SMC4-217ENST00000485867 GGNBP2Q9H3C7 697 aa9.24□□□□□ -0.93
SMC4-217ENST00000485867 DNMT3AQ9Y6K1 912 aaPredicted RBP9.24□□□□□ -0.93
SMC4-217ENST00000485867 PASKQ96RG2 1323 aa9.24□□□□□ -0.93
SMC4-217ENST00000485867 TONSLQ96HA7 1378 aa9.24□□□□□ -0.93
SMC4-217ENST00000485867 THSD7BQ9C0I4 1608 aa9.23□□□□□ -0.93
SMC4-217ENST00000485867 FYB1O15117 783 aa9.23□□□□□ -0.93
SMC4-217ENST00000485867 MSX1P28360 303 aa9.23□□□□□ -0.93
SMC4-217ENST00000485867 LBRQ14739 615 aaKnown RBP9.23□□□□□ -0.93
SMC4-217ENST00000485867 TLR1Q15399 786 aa9.23□□□□□ -0.93
SMC4-217ENST00000485867 PLPP7Q8NBV4 271 aa9.23□□□□□ -0.93
SMC4-217ENST00000485867 NSFL1CQ9UNZ2 370 aaKnown RBP9.23□□□□□ -0.93
SMC4-217ENST00000485867 CACNA1SQ13698 1873 aa9.23□□□□□ -0.93
SMC4-217ENST00000485867 ANKRD31Q8N7Z5 1873 aa9.23□□□□□ -0.93
SMC4-217ENST00000485867 CCDC85CA6NKD9 419 aa9.22□□□□□ -0.93
SMC4-217ENST00000485867 TM4SF1P30408 202 aa9.22□□□□□ -0.93
SMC4-217ENST00000485867 SOX11P35716 441 aa9.22□□□□□ -0.93
SMC4-217ENST00000485867 IFNL2Q8IZJ0 200 aa9.22□□□□□ -0.93
SMC4-217ENST00000485867 RUBCNLQ9H714 662 aa9.22□□□□□ -0.93
SMC4-217ENST00000485867 COL11A2P13942 1736 aaPredicted RBP9.22□□□□□ -0.93
SMC4-217ENST00000485867 ADAMTSL1Q8N6G6 1762 aa9.22□□□□□ -0.93
SMC4-217ENST00000485867 INHAP05111 366 aa9.21□□□□□ -0.94
SMC4-217ENST00000485867 CRKLP46109 303 aaKnown RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms