RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 DLC1Q96QB1 1528 aa13.01□□□□□ -0.33
SMPD4-218ENST00000482171 H0YHG0 523 aa13□□□□□ -0.33
SMPD4-218ENST00000482171 SNAP23O00161 211 aa13□□□□□ -0.33
SMPD4-218ENST00000482171 HIBADHP31937 336 aaKnown RBP13□□□□□ -0.33
SMPD4-218ENST00000482171 PHKA1P46020 1223 aa13□□□□□ -0.33
SMPD4-218ENST00000482171 SLFNL1Q499Z3 407 aa13□□□□□ -0.33
SMPD4-218ENST00000482171 ANO6Q4KMQ2 910 aa13□□□□□ -0.33
SMPD4-218ENST00000482171 SPATA5Q8NB90 893 aa13□□□□□ -0.33
SMPD4-218ENST00000482171 C1orf167Q5SNV9 1468 aa13□□□□□ -0.33
SMPD4-218ENST00000482171 GADD45BO75293 160 aaPredicted RBP13□□□□□ -0.33
SMPD4-218ENST00000482171 SLF2Q8IX21 1173 aa13□□□□□ -0.33
SMPD4-218ENST00000482171 DEPDC5O75140 1603 aa13□□□□□ -0.33
SMPD4-218ENST00000482171 KIF2AO00139 706 aaPredicted RBP13□□□□□ -0.33
SMPD4-218ENST00000482171 RIOK3O14730 519 aaKnown RBP13□□□□□ -0.33
SMPD4-218ENST00000482171 LDHBP07195 334 aaKnown RBP13□□□□□ -0.33
SMPD4-218ENST00000482171 EPS15P42566 896 aa13□□□□□ -0.33
SMPD4-218ENST00000482171 HLFQ16534 295 aa13□□□□□ -0.33
SMPD4-218ENST00000482171 CCDC102BQ68D86 513 aa13□□□□□ -0.33
SMPD4-218ENST00000482171 TIGD1Q96MW7 591 aa13□□□□□ -0.33
SMPD4-218ENST00000482171 MAGEC2Q9UBF1 373 aaPredicted RBP13□□□□□ -0.33
SMPD4-218ENST00000482171 PAXBP1Q9Y5B6 917 aa13□□□□□ -0.33
SMPD4-218ENST00000482171 UFL1O94874 794 aa12.99□□□□□ -0.33
SMPD4-218ENST00000482171 USPL1Q5W0Q7 1092 aa12.99□□□□□ -0.33
SMPD4-218ENST00000482171 LSG1Q9H089 658 aaKnown RBP12.99□□□□□ -0.33
SMPD4-218ENST00000482171 AATFQ9NY61 560 aaKnown RBP eCLIP12.99□□□□□ -0.33
SMPD4-218ENST00000482171 CRB1P82279 1406 aa12.99□□□□□ -0.33
SMPD4-218ENST00000482171 TMEM131LA2VDJ0 1609 aa12.99□□□□□ -0.33
SMPD4-218ENST00000482171 ZNF500O60304 480 aaPredicted RBP12.99□□□□□ -0.33
SMPD4-218ENST00000482171 KIF5BP33176 963 aa12.99□□□□□ -0.33
SMPD4-218ENST00000482171 POLA2Q14181 598 aa12.99□□□□□ -0.33
SMPD4-218ENST00000482171 AXDND1Q5T1B0 1012 aaPredicted RBP12.99□□□□□ -0.33
SMPD4-218ENST00000482171 CDC37L1Q7L3B6 337 aa12.99□□□□□ -0.33
SMPD4-218ENST00000482171 ZNF804AQ7Z570 1209 aa12.99□□□□□ -0.33
SMPD4-218ENST00000482171 HAUS7Q99871 368 aa12.99□□□□□ -0.33
SMPD4-218ENST00000482171 TMX1Q9H3N1 280 aa12.99□□□□□ -0.33
SMPD4-218ENST00000482171 E7EWF7 191 aa12.99□□□□□ -0.33
SMPD4-218ENST00000482171 ZNF76P36508 570 aa12.99□□□□□ -0.33
SMPD4-218ENST00000482171 TRMT1LQ7Z2T5 733 aaKnown RBP12.99□□□□□ -0.33
SMPD4-218ENST00000482171 ZFP91Q96JP5 570 aaPredicted RBP12.99□□□□□ -0.33
SMPD4-218ENST00000482171 RUFY1Q96T51 708 aa12.99□□□□□ -0.33
SMPD4-218ENST00000482171 DNAJC25Q9H1X3 360 aa12.99□□□□□ -0.33
SMPD4-218ENST00000482171 SAP30BPQ9UHR5 308 aaKnown RBP12.99□□□□□ -0.33
SMPD4-218ENST00000482171 SKILP12757 684 aa12.99□□□□□ -0.33
SMPD4-218ENST00000482171 RPS8P62241 208 aaKnown RBP12.98□□□□□ -0.33
SMPD4-218ENST00000482171 PI4K2BQ8TCG2 481 aa12.98□□□□□ -0.33
SMPD4-218ENST00000482171 PHKBQ93100 1093 aa12.98□□□□□ -0.33
SMPD4-218ENST00000482171 DACH1Q9UI36 760 aa12.98□□□□□ -0.33
SMPD4-218ENST00000482171 TPCN1Q9ULQ1 816 aa12.98□□□□□ -0.33
SMPD4-218ENST00000482171 HSPD1P10809 573 aaKnown RBP12.98□□□□□ -0.33
SMPD4-218ENST00000482171 LUZP1Q86V48 1076 aa12.98□□□□□ -0.33
SMPD4-218ENST00000482171 CCDC102AQ96A19 550 aa12.98□□□□□ -0.33
SMPD4-218ENST00000482171 PPLO60437 1756 aa12.98□□□□□ -0.33
SMPD4-218ENST00000482171 IQSEC2Q5JU85 1478 aa12.98□□□□□ -0.33
SMPD4-218ENST00000482171 hCG_1642624A0A1W2PR95 340 aa12.98□□□□□ -0.33
SMPD4-218ENST00000482171 PATL2C9JE40 543 aaKnown RBP12.98□□□□□ -0.33
SMPD4-218ENST00000482171 SYKP43405 635 aa12.98□□□□□ -0.33
SMPD4-218ENST00000482171 NLRP10Q86W26 655 aa12.98□□□□□ -0.33
SMPD4-218ENST00000482171 PPFIBP1Q86W92 1011 aa12.98□□□□□ -0.33
SMPD4-218ENST00000482171 ANKRD2Q9GZV1 360 aa12.98□□□□□ -0.33
SMPD4-218ENST00000482171 EPB41L2O43491 1005 aaKnown RBP12.97□□□□□ -0.33
SMPD4-218ENST00000482171 GNAT2P19087 354 aa12.97□□□□□ -0.33
SMPD4-218ENST00000482171 SNW1Q13573 536 aaKnown RBP12.97□□□□□ -0.33
SMPD4-218ENST00000482171 STIM1Q13586 685 aa12.97□□□□□ -0.33
SMPD4-218ENST00000482171 TMTC2Q8N394 836 aa12.97□□□□□ -0.33
SMPD4-218ENST00000482171 TANGO6Q9C0B7 1094 aa12.97□□□□□ -0.33
SMPD4-218ENST00000482171 SPTLC2O15270 562 aa12.97□□□□□ -0.33
SMPD4-218ENST00000482171 BMS1Q14692 1282 aaKnown RBP12.97□□□□□ -0.33
SMPD4-218ENST00000482171 CAGE1Q8TC20 777 aa12.97□□□□□ -0.33
SMPD4-218ENST00000482171 DENND2AQ9ULE3 1009 aa12.97□□□□□ -0.33
SMPD4-218ENST00000482171 SMTNL1A8MU46 457 aa12.97□□□□□ -0.33
SMPD4-218ENST00000482171 CTAGE5O15320 804 aa12.97□□□□□ -0.33
SMPD4-218ENST00000482171 PDE8BO95263 885 aa12.97□□□□□ -0.33
SMPD4-218ENST00000482171 IL6STP40189 918 aaPredicted RBP12.97□□□□□ -0.33
SMPD4-218ENST00000482171 AFMP43652 599 aa12.97□□□□□ -0.33
SMPD4-218ENST00000482171 MRPS27Q92552 414 aaKnown RBP12.97□□□□□ -0.33
SMPD4-218ENST00000482171 ANGEL1Q9UNK9 670 aaKnown RBP12.97□□□□□ -0.33
SMPD4-218ENST00000482171 GSTO1P78417 241 aa12.96□□□□□ -0.33
SMPD4-218ENST00000482171 TMC6Q7Z403 805 aa12.96□□□□□ -0.33
SMPD4-218ENST00000482171 HEATR3Q7Z4Q2 680 aa12.96□□□□□ -0.33
SMPD4-218ENST00000482171 ERCC4Q92889 916 aaPredicted RBP12.96□□□□□ -0.33
SMPD4-218ENST00000482171 ZBTB9Q96C00 473 aa12.96□□□□□ -0.33
SMPD4-218ENST00000482171 CEP89Q96ST8 783 aa12.96□□□□□ -0.33
SMPD4-218ENST00000482171 ATG3Q9NT62 314 aa12.96□□□□□ -0.33
SMPD4-218ENST00000482171 ADCY9O60503 1353 aa12.96□□□□□ -0.33
SMPD4-218ENST00000482171 A0A1B0GVL5 298 aa12.96□□□□□ -0.33
SMPD4-218ENST00000482171 NBPF26B4DH59 902 aa12.96□□□□□ -0.33
SMPD4-218ENST00000482171 FGAP02671 866 aa12.96□□□□□ -0.33
SMPD4-218ENST00000482171 PDE6AP16499 860 aa12.96□□□□□ -0.33
SMPD4-218ENST00000482171 TYRO3Q06418 890 aa12.96□□□□□ -0.33
SMPD4-218ENST00000482171 NBPF14Q5TI25 921 aa12.96□□□□□ -0.33
SMPD4-218ENST00000482171 NBPF10Q6P3W6 841 aaKnown RBP12.96□□□□□ -0.33
SMPD4-218ENST00000482171 NBPF15Q8N660 670 aa12.96□□□□□ -0.33
SMPD4-218ENST00000482171 SDR42E1Q8WUS8 393 aa12.96□□□□□ -0.33
SMPD4-218ENST00000482171 TNS3Q68CZ2 1445 aa12.96□□□□□ -0.33
SMPD4-218ENST00000482171 MROH5Q6ZUA9 1318 aa12.96□□□□□ -0.33
SMPD4-218ENST00000482171 NEURL4Q96JN8 1562 aa12.96□□□□□ -0.33
SMPD4-218ENST00000482171 CD163L1Q9NR16 1453 aa12.96□□□□□ -0.33
SMPD4-218ENST00000482171 KIF20AO95235 890 aa12.96□□□□□ -0.33
SMPD4-218ENST00000482171 GPT2Q8TD30 523 aa12.96□□□□□ -0.33
SMPD4-218ENST00000482171 BCL2L12Q9HB09 334 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms