RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 OSGEPQ9NPF4 335 aa9.32□□□□□ -0.92
SF3B1-210ENST00000482158 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.32□□□□□ -0.92
SF3B1-210ENST00000482158 NME2P22392 152 aa9.31□□□□□ -0.92
SF3B1-210ENST00000482158 C19orf57Q0VDD7 668 aa9.31□□□□□ -0.92
SF3B1-210ENST00000482158 TTBK2Q6IQ55 1244 aa9.31□□□□□ -0.92
SF3B1-210ENST00000482158 AGMOQ6ZNB7 445 aa9.31□□□□□ -0.92
SF3B1-210ENST00000482158 PDZD3Q86UT5 571 aa9.31□□□□□ -0.92
SF3B1-210ENST00000482158 SULF2Q8IWU5 870 aa9.31□□□□□ -0.92
SF3B1-210ENST00000482158 RHOVQ96L33 236 aa9.31□□□□□ -0.92
SF3B1-210ENST00000482158 ACBD3Q9H3P7 528 aa9.31□□□□□ -0.92
SF3B1-210ENST00000482158 RLBP1P12271 317 aa9.3□□□□□ -0.92
SF3B1-210ENST00000482158 TFE3P19532 575 aaPredicted RBP9.3□□□□□ -0.92
SF3B1-210ENST00000482158 GSTM4Q03013 218 aa9.3□□□□□ -0.92
SF3B1-210ENST00000482158 TRAPPC3LQ5T215 181 aa9.3□□□□□ -0.92
SF3B1-210ENST00000482158 ZSCAN1Q8NBB4 408 aa9.3□□□□□ -0.92
SF3B1-210ENST00000482158 GRIN3AQ8TCU5 1115 aa9.3□□□□□ -0.92
SF3B1-210ENST00000482158 ADAMTS1Q9UHI8 967 aa9.3□□□□□ -0.92
SF3B1-210ENST00000482158 A0A0A0MRY4 1105 aa9.29□□□□□ -0.92
SF3B1-210ENST00000482158 MINDY4BA8MYZ0 360 aa9.29□□□□□ -0.92
SF3B1-210ENST00000482158 ADAM11O75078 769 aa9.29□□□□□ -0.92
SF3B1-210ENST00000482158 ECEL1O95672 775 aa9.29□□□□□ -0.92
SF3B1-210ENST00000482158 CTSBP07858 339 aa9.29□□□□□ -0.92
SF3B1-210ENST00000482158 GARTP22102 1010 aa9.29□□□□□ -0.92
SF3B1-210ENST00000482158 ARNTP27540 789 aa9.29□□□□□ -0.92
SF3B1-210ENST00000482158 GBP2P32456 591 aaPredicted RBP9.29□□□□□ -0.92
SF3B1-210ENST00000482158 RPS26P62854 115 aaKnown RBP9.29□□□□□ -0.92
SF3B1-210ENST00000482158 ZNF252P-AS1Q0IIN9 211 aa9.29□□□□□ -0.92
SF3B1-210ENST00000482158 FAM117BQ6P1L5 589 aa9.29□□□□□ -0.92
SF3B1-210ENST00000482158 RELL1Q8IUW5 271 aa9.29□□□□□ -0.92
SF3B1-210ENST00000482158 ZNF654Q8IZM8 581 aa9.29□□□□□ -0.92
SF3B1-210ENST00000482158 PLVAPQ9BX97 442 aa9.29□□□□□ -0.92
SF3B1-210ENST00000482158 KCNK4Q9NYG8 393 aa9.29□□□□□ -0.92
SF3B1-210ENST00000482158 DDX3YO15523 660 aaKnown RBP9.28□□□□□ -0.92
SF3B1-210ENST00000482158 TNNI2P48788 182 aa9.28□□□□□ -0.92
SF3B1-210ENST00000482158 PWP1Q13610 501 aa9.28□□□□□ -0.92
SF3B1-210ENST00000482158 FOXD4L6Q3SYB3 417 aaPredicted RBP9.28□□□□□ -0.92
SF3B1-210ENST00000482158 FOXD4L3Q6VB84 417 aaPredicted RBP9.28□□□□□ -0.92
SF3B1-210ENST00000482158 MPRIPQ6WCQ1 1025 aa9.28□□□□□ -0.92
SF3B1-210ENST00000482158 FBXO11Q86XK2 927 aa9.28□□□□□ -0.92
SF3B1-210ENST00000482158 MAP4K3Q8IVH8 894 aa9.28□□□□□ -0.92
SF3B1-210ENST00000482158 DTWD1Q8N5C7 304 aa9.28□□□□□ -0.92
SF3B1-210ENST00000482158 KLHL23Q8NBE8 558 aa9.28□□□□□ -0.92
SF3B1-210ENST00000482158 C8orf37Q96NL8 207 aa9.28□□□□□ -0.92
SF3B1-210ENST00000482158 KCNQ5Q9NR82 932 aa9.28□□□□□ -0.92
SF3B1-210ENST00000482158 PCDHB5Q9Y5E4 795 aa9.28□□□□□ -0.92
SF3B1-210ENST00000482158 CNTNAP5Q8WYK1 1306 aa9.28□□□□□ -0.92
SF3B1-210ENST00000482158 GNB5O14775 395 aa9.27□□□□□ -0.93
SF3B1-210ENST00000482158 PF4P02776 101 aa9.27□□□□□ -0.93
SF3B1-210ENST00000482158 ARL4DP49703 201 aa9.27□□□□□ -0.93
SF3B1-210ENST00000482158 ZC3H6P61129 1189 aaKnown RBP9.27□□□□□ -0.93
SF3B1-210ENST00000482158 AP3B2Q13367 1082 aa9.27□□□□□ -0.93
SF3B1-210ENST00000482158 SUZ12Q15022 739 aaKnown RBP9.27□□□□□ -0.93
SF3B1-210ENST00000482158 FMR1NBQ8N0W7 255 aaPredicted RBP9.27□□□□□ -0.93
SF3B1-210ENST00000482158 TINF2Q9BSI4 451 aa9.27□□□□□ -0.93
SF3B1-210ENST00000482158 CACNA2D2Q9NY47 1150 aa9.27□□□□□ -0.93
SF3B1-210ENST00000482158 ADAMTS8Q9UP79 889 aa9.27□□□□□ -0.93
SF3B1-210ENST00000482158 DLL1O00548 723 aa9.26□□□□□ -0.93
SF3B1-210ENST00000482158 GSTP1P09211 210 aaKnown RBP9.26□□□□□ -0.93
SF3B1-210ENST00000482158 LMNB2Q03252 620 aa9.26□□□□□ -0.93
SF3B1-210ENST00000482158 CAMK2GQ13555 558 aaPredicted RBP9.26□□□□□ -0.93
SF3B1-210ENST00000482158 FBXL19Q6PCT2 694 aa9.26□□□□□ -0.93
SF3B1-210ENST00000482158 DDX54Q8TDD1 881 aaKnown RBP9.26□□□□□ -0.93
SF3B1-210ENST00000482158 CCSER2Q9H7U1 834 aa9.26□□□□□ -0.93
SF3B1-210ENST00000482158 MKL2Q9ULH7 1088 aa9.26□□□□□ -0.93
SF3B1-210ENST00000482158 CYP8B1Q9UNU6 501 aa9.26□□□□□ -0.93
SF3B1-210ENST00000482158 FAM229AH3BQW9 127 aa9.25□□□□□ -0.93
SF3B1-210ENST00000482158 DLGAP3O95886 979 aa9.25□□□□□ -0.93
SF3B1-210ENST00000482158 MAOBP27338 520 aa9.25□□□□□ -0.93
SF3B1-210ENST00000482158 CD68P34810 354 aaPredicted RBP9.25□□□□□ -0.93
SF3B1-210ENST00000482158 EIF4A3P38919 411 aaKnown RBP9.25□□□□□ -0.93
SF3B1-210ENST00000482158 NLRP12P59046 1061 aa9.25□□□□□ -0.93
SF3B1-210ENST00000482158 FAM160A1Q05DH4 1040 aa9.25□□□□□ -0.93
SF3B1-210ENST00000482158 PTPN11Q06124 597 aaPredicted RBP9.25□□□□□ -0.93
SF3B1-210ENST00000482158 POU4F3Q15319 338 aa9.25□□□□□ -0.93
SF3B1-210ENST00000482158 GAL3ST3Q96A11 431 aa9.25□□□□□ -0.93
SF3B1-210ENST00000482158 SAMM50Q9Y512 469 aa9.25□□□□□ -0.93
SF3B1-210ENST00000482158 GREM1O60565 184 aa9.24□□□□□ -0.93
SF3B1-210ENST00000482158 CYP11A1P05108 521 aa9.24□□□□□ -0.93
SF3B1-210ENST00000482158 NAALADL2Q58DX5 795 aa9.24□□□□□ -0.93
SF3B1-210ENST00000482158 LLGL2Q6P1M3 1020 aa9.24□□□□□ -0.93
SF3B1-210ENST00000482158 TRIM42Q8IWZ5 723 aa9.24□□□□□ -0.93
SF3B1-210ENST00000482158 ZNF296Q8WUU4 475 aaPredicted RBP9.24□□□□□ -0.93
SF3B1-210ENST00000482158 EMILIN2Q9BXX0 1053 aa9.24□□□□□ -0.93
SF3B1-210ENST00000482158 ZC3H12CQ9C0D7 883 aaKnown RBP9.24□□□□□ -0.93
SF3B1-210ENST00000482158 CBX8Q9HC52 389 aa9.24□□□□□ -0.93
SF3B1-210ENST00000482158 LOC100289279A0A1B0GTE1 492 aa9.23□□□□□ -0.93
SF3B1-210ENST00000482158 WISP1O95388 367 aa9.23□□□□□ -0.93
SF3B1-210ENST00000482158 SELPP16109 830 aa9.23□□□□□ -0.93
SF3B1-210ENST00000482158 PAK2Q13177 524 aa9.23□□□□□ -0.93
SF3B1-210ENST00000482158 LRRC14Q15048 493 aa9.23□□□□□ -0.93
SF3B1-210ENST00000482158 UBASH3BQ8TF42 649 aa9.23□□□□□ -0.93
SF3B1-210ENST00000482158 EAF1Q96JC9 268 aaPredicted RBP9.23□□□□□ -0.93
SF3B1-210ENST00000482158 SPON2Q9BUD6 331 aa9.23□□□□□ -0.93
SF3B1-210ENST00000482158 CCDC86Q9H6F5 360 aaKnown RBP9.23□□□□□ -0.93
SF3B1-210ENST00000482158 GJA8P48165 433 aa9.22□□□□□ -0.93
SF3B1-210ENST00000482158 SEPT6Q14141 434 aa9.22□□□□□ -0.93
SF3B1-210ENST00000482158 MAP1SQ66K74 1059 aaPredicted RBP9.22□□□□□ -0.93
SF3B1-210ENST00000482158 BNC2Q6ZN30 1099 aaPredicted RBP9.22□□□□□ -0.93
SF3B1-210ENST00000482158 GOLM1Q8NBJ4 401 aa9.22□□□□□ -0.93
SF3B1-210ENST00000482158 USP26Q9BXU7 913 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms