RNA–Protein interactions for RNA: ENST00000481965.6

SEC22A-207, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3 BASIC

Gene SEC22A, Length 673 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-207ENST00000481965 HMGB1P09429 215 aaKnown RBP9.72□□□□□ -0.85
SEC22A-207ENST00000481965 NME2P22392 152 aa9.72□□□□□ -0.85
SEC22A-207ENST00000481965 RAB33AQ14088 237 aa9.72□□□□□ -0.85
SEC22A-207ENST00000481965 PCSK7Q16549 785 aa9.72□□□□□ -0.85
SEC22A-207ENST00000481965 FAM169BQ8N8A8 192 aa9.72□□□□□ -0.85
SEC22A-207ENST00000481965 NANOS1Q8WY41 292 aaKnown RBP9.72□□□□□ -0.85
SEC22A-207ENST00000481965 MKL1Q969V6 931 aa9.72□□□□□ -0.85
SEC22A-207ENST00000481965 ANAPC16Q96DE5 110 aa9.72□□□□□ -0.85
SEC22A-207ENST00000481965 RBSNQ9H1K0 784 aa9.72□□□□□ -0.85
SEC22A-207ENST00000481965 PRKAG3Q9UGI9 489 aa9.72□□□□□ -0.85
SEC22A-207ENST00000481965 ROBO2Q9HCK4 1378 aa9.72□□□□□ -0.85
SEC22A-207ENST00000481965 CILPO75339 1184 aa9.71□□□□□ -0.86
SEC22A-207ENST00000481965 ESRRAP11474 423 aaPredicted RBP9.71□□□□□ -0.86
SEC22A-207ENST00000481965 BMP4P12644 408 aa9.71□□□□□ -0.86
SEC22A-207ENST00000481965 PTPN11Q06124 597 aaPredicted RBP9.71□□□□□ -0.86
SEC22A-207ENST00000481965 PPP2R3AQ06190 1150 aa9.71□□□□□ -0.86
SEC22A-207ENST00000481965 GAS6Q14393 721 aa9.71□□□□□ -0.86
SEC22A-207ENST00000481965 LAPTM4AQ15012 233 aa9.71□□□□□ -0.86
SEC22A-207ENST00000481965 EGFLAMQ63HQ2 1017 aa9.71□□□□□ -0.86
SEC22A-207ENST00000481965 SULF2Q8IWU5 870 aa9.71□□□□□ -0.86
SEC22A-207ENST00000481965 JARID2Q92833 1246 aaPredicted RBP9.71□□□□□ -0.86
SEC22A-207ENST00000481965 SMG9Q9H0W8 520 aaKnown RBP9.71□□□□□ -0.86
SEC22A-207ENST00000481965 MIR1-1HGQ9H1L0 117 aa9.71□□□□□ -0.86
SEC22A-207ENST00000481965 AVENQ9NQS1 362 aaPredicted RBP9.71□□□□□ -0.86
SEC22A-207ENST00000481965 SH2B1Q9NRF2 756 aaPredicted RBP9.71□□□□□ -0.86
SEC22A-207ENST00000481965 ZNF252P-AS1Q0IIN9 211 aa9.7□□□□□ -0.86
SEC22A-207ENST00000481965 MPP2Q14168 576 aa9.7□□□□□ -0.86
SEC22A-207ENST00000481965 FOXR1Q6PIV2 292 aa9.7□□□□□ -0.86
SEC22A-207ENST00000481965 MPRIPQ6WCQ1 1025 aa9.7□□□□□ -0.86
SEC22A-207ENST00000481965 SV2AQ7L0J3 742 aa9.7□□□□□ -0.86
SEC22A-207ENST00000481965 PDZD3Q86UT5 571 aa9.7□□□□□ -0.86
SEC22A-207ENST00000481965 CPLX3Q8WVH0 158 aa9.7□□□□□ -0.86
SEC22A-207ENST00000481965 LACRTQ9GZZ8 138 aa9.7□□□□□ -0.86
SEC22A-207ENST00000481965 CYP8B1Q9UNU6 501 aa9.7□□□□□ -0.86
SEC22A-207ENST00000481965 MRPL42Q9Y6G3 142 aaKnown RBP9.7□□□□□ -0.86
SEC22A-207ENST00000481965 ADARB2-AS1A8MUL3 147 aa9.69□□□□□ -0.86
SEC22A-207ENST00000481965 SMAD7O15105 426 aaKnown RBP9.69□□□□□ -0.86
SEC22A-207ENST00000481965 PTPRAP18433 802 aa9.69□□□□□ -0.86
SEC22A-207ENST00000481965 ARNTP27540 789 aa9.69□□□□□ -0.86
SEC22A-207ENST00000481965 ADH7P40394 386 aa9.69□□□□□ -0.86
SEC22A-207ENST00000481965 RASA3Q14644 834 aa9.69□□□□□ -0.86
SEC22A-207ENST00000481965 NFE2L2Q16236 605 aa9.69□□□□□ -0.86
SEC22A-207ENST00000481965 FCHSD1Q86WN1 690 aa9.69□□□□□ -0.86
SEC22A-207ENST00000481965 SIRPGQ9P1W8 387 aa9.69□□□□□ -0.86
SEC22A-207ENST00000481965 SBNO2Q9Y2G9 1366 aa9.68□□□□□ -0.86
SEC22A-207ENST00000481965 ANKRD62A6NC57 917 aa9.68□□□□□ -0.86
SEC22A-207ENST00000481965 SELPP16109 830 aa9.68□□□□□ -0.86
SEC22A-207ENST00000481965 EPHA1P21709 976 aa9.68□□□□□ -0.86
SEC22A-207ENST00000481965 GIPRP48546 466 aa9.68□□□□□ -0.86
SEC22A-207ENST00000481965 TCEAL1Q15170 157 aa9.68□□□□□ -0.86
SEC22A-207ENST00000481965 REC114Q7Z4M0 266 aa9.68□□□□□ -0.86
SEC22A-207ENST00000481965 MRFAP1L1Q96HT8 127 aa9.68□□□□□ -0.86
SEC22A-207ENST00000481965 BRMS1Q9HCU9 246 aa9.68□□□□□ -0.86
SEC22A-207ENST00000481965 FAM221BA6H8Z2 402 aa9.67□□□□□ -0.86
SEC22A-207ENST00000481965 CLCQ05315 142 aa9.67□□□□□ -0.86
SEC22A-207ENST00000481965 HGSNATQ68CP4 663 aa9.67□□□□□ -0.86
SEC22A-207ENST00000481965 LLGL2Q6P1M3 1020 aa9.67□□□□□ -0.86
SEC22A-207ENST00000481965 ELMSAN1Q6PJG2 1045 aa9.67□□□□□ -0.86
SEC22A-207ENST00000481965 CELF2-AS1Q8N7Q2 184 aa9.67□□□□□ -0.86
SEC22A-207ENST00000481965 SNTG2Q9NY99 539 aa9.67□□□□□ -0.86
SEC22A-207ENST00000481965 FRRS1LQ9P0K9 344 aa9.67□□□□□ -0.86
SEC22A-207ENST00000481965 SAMM50Q9Y512 469 aa9.67□□□□□ -0.86
SEC22A-207ENST00000481965 SOX1O00570 391 aaPredicted RBP9.66□□□□□ -0.86
SEC22A-207ENST00000481965 ARAFP10398 606 aa9.66□□□□□ -0.86
SEC22A-207ENST00000481965 CWF19L2Q2TBE0 894 aaKnown RBP9.66□□□□□ -0.86
SEC22A-207ENST00000481965 MICALL1Q8N3F8 863 aa9.66□□□□□ -0.86
SEC22A-207ENST00000481965 TRIM55Q9BYV6 548 aa9.66□□□□□ -0.86
SEC22A-207ENST00000481965 CACNA2D2Q9NY47 1150 aa9.66□□□□□ -0.86
SEC22A-207ENST00000481965 POLR3KQ9Y2Y1 108 aaPredicted RBP9.66□□□□□ -0.86
SEC22A-207ENST00000481965 LCE2BO14633 110 aa9.65□□□□□ -0.86
SEC22A-207ENST00000481965 MX2P20592 715 aa9.65□□□□□ -0.86
SEC22A-207ENST00000481965 MCM4P33991 863 aa9.65□□□□□ -0.86
SEC22A-207ENST00000481965 EIF6P56537 245 aaKnown RBP9.65□□□□□ -0.86
SEC22A-207ENST00000481965 LRRC14Q15048 493 aa9.65□□□□□ -0.86
SEC22A-207ENST00000481965 GRIK5Q16478 980 aa9.65□□□□□ -0.86
SEC22A-207ENST00000481965 PSAPL1Q6NUJ1 521 aa9.65□□□□□ -0.86
SEC22A-207ENST00000481965 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.65□□□□□ -0.86
SEC22A-207ENST00000481965 REXO1Q8N1G1 1221 aaKnown RBP9.65□□□□□ -0.86
SEC22A-207ENST00000481965 SRPK1Q96SB4 655 aaKnown RBP9.65□□□□□ -0.86
SEC22A-207ENST00000481965 CBX8Q9HC52 389 aa9.65□□□□□ -0.86
SEC22A-207ENST00000481965 ZNRF3Q9ULT6 936 aa9.65□□□□□ -0.86
SEC22A-207ENST00000481965 MSRB2Q9Y3D2 182 aa9.65□□□□□ -0.86
SEC22A-207ENST00000481965 LMNB1P20700 586 aa9.64□□□□□ -0.87
SEC22A-207ENST00000481965 ADH6P28332 368 aa9.64□□□□□ -0.87
SEC22A-207ENST00000481965 CDK8P49336 464 aa9.64□□□□□ -0.87
SEC22A-207ENST00000481965 IKBKEQ14164 716 aa9.64□□□□□ -0.87
SEC22A-207ENST00000481965 GK5Q6ZS86 529 aa9.64□□□□□ -0.87
SEC22A-207ENST00000481965 TTC9Q92623 222 aa9.64□□□□□ -0.87
SEC22A-207ENST00000481965 DEPDC7Q96QD5 511 aa9.64□□□□□ -0.87
SEC22A-207ENST00000481965 FERD3LQ96RJ6 166 aa9.64□□□□□ -0.87
SEC22A-207ENST00000481965 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.64□□□□□ -0.87
SEC22A-207ENST00000481965 NEURL1BA8MQ27 555 aa9.63□□□□□ -0.87
SEC22A-207ENST00000481965 CDC27P30260 824 aa9.63□□□□□ -0.87
SEC22A-207ENST00000481965 ZNF165P49910 485 aa9.63□□□□□ -0.87
SEC22A-207ENST00000481965 GDF6Q6KF10 455 aaPredicted RBP9.63□□□□□ -0.87
SEC22A-207ENST00000481965 GPR161Q8N6U8 529 aaKnown RBP9.63□□□□□ -0.87
SEC22A-207ENST00000481965 RNPC3Q96LT9 517 aaKnown RBP9.63□□□□□ -0.87
SEC22A-207ENST00000481965 EMILIN2Q9BXX0 1053 aa9.63□□□□□ -0.87
SEC22A-207ENST00000481965 STARD13Q9Y3M8 1113 aa9.63□□□□□ -0.87
SEC22A-207ENST00000481965 H3BRJ5 948 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms