RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 HPS5Q9UPZ3 1129 aa23.61■■□□□ 1.37
ABCF3-214ENST00000480562 ZBTB48P10074 688 aaPredicted RBP23.6■■□□□ 1.37
ABCF3-214ENST00000480562 GJA5P36382 358 aa23.6■■□□□ 1.37
ABCF3-214ENST00000480562 RFX5P48382 616 aaPredicted RBP23.6■■□□□ 1.37
ABCF3-214ENST00000480562 NOM1Q5C9Z4 860 aaKnown RBP23.6■■□□□ 1.37
ABCF3-214ENST00000480562 IFNL1Q8IU54 200 aa23.6■■□□□ 1.37
ABCF3-214ENST00000480562 TRMT2AQ8IZ69 625 aaKnown RBP23.6■■□□□ 1.37
ABCF3-214ENST00000480562 CFHR5Q9BXR6 569 aa23.6■■□□□ 1.37
ABCF3-214ENST00000480562 UNCXA6NJT0 531 aa23.59■■□□□ 1.37
ABCF3-214ENST00000480562 FKTNO75072 461 aa23.59■■□□□ 1.37
ABCF3-214ENST00000480562 FGFR2P21802 821 aa23.59■■□□□ 1.37
ABCF3-214ENST00000480562 INHBEP58166 350 aa23.59■■□□□ 1.37
ABCF3-214ENST00000480562 PUM3Q15397 648 aaKnown RBP23.59■■□□□ 1.37
ABCF3-214ENST00000480562 ANKRD13AQ8IZ07 590 aa23.59■■□□□ 1.37
ABCF3-214ENST00000480562 TBC1D22AQ8WUA7 517 aa23.59■■□□□ 1.37
ABCF3-214ENST00000480562 TEPSINQ96N21 525 aa23.59■■□□□ 1.37
ABCF3-214ENST00000480562 TMEM39BQ9GZU3 492 aa23.59■■□□□ 1.37
ABCF3-214ENST00000480562 EYA2O00167 538 aa23.58■■□□□ 1.37
ABCF3-214ENST00000480562 IGF2BP3O00425 579 aaKnown RBP eCLIP23.58■■□□□ 1.37
ABCF3-214ENST00000480562 ALDH1A1P00352 501 aa23.58■■□□□ 1.37
ABCF3-214ENST00000480562 IFIT1P09914 478 aaKnown RBP23.58■■□□□ 1.37
ABCF3-214ENST00000480562 PKN2Q16513 984 aaKnown RBP23.58■■□□□ 1.37
ABCF3-214ENST00000480562 CACNB3P54284 484 aa23.57■■□□□ 1.36
ABCF3-214ENST00000480562 TEKT1Q969V4 418 aa23.57■■□□□ 1.36
ABCF3-214ENST00000480562 ELP3Q9H9T3 547 aa23.57■■□□□ 1.36
ABCF3-214ENST00000480562 NOB1Q9ULX3 412 aaKnown RBP23.57■■□□□ 1.36
ABCF3-214ENST00000480562 TNNI2P48788 182 aa23.56■■□□□ 1.36
ABCF3-214ENST00000480562 HDLBPQ00341 1268 aaKnown RBP23.56■■□□□ 1.36
ABCF3-214ENST00000480562 UBTFL1P0CB47 393 aaPredicted RBP23.55■■□□□ 1.36
ABCF3-214ENST00000480562 SLC5A1P13866 664 aa23.55■■□□□ 1.36
ABCF3-214ENST00000480562 ATG9AQ7Z3C6 839 aa23.55■■□□□ 1.36
ABCF3-214ENST00000480562 SIL1Q9H173 461 aa23.55■■□□□ 1.36
ABCF3-214ENST00000480562 KIF16BQ96L93 1317 aa23.55■■□□□ 1.36
ABCF3-214ENST00000480562 OTOFQ9HC10 1997 aa23.54■■□□□ 1.36
ABCF3-214ENST00000480562 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.54■■□□□ 1.36
ABCF3-214ENST00000480562 CNKSR2Q8WXI2 1034 aa23.54■■□□□ 1.36
ABCF3-214ENST00000480562 LPIN2Q92539 896 aa23.54■■□□□ 1.36
ABCF3-214ENST00000480562 OPTNQ96CV9 577 aa23.54■■□□□ 1.36
ABCF3-214ENST00000480562 TNRC18O15417 2968 aaPredicted RBP23.54■■□□□ 1.36
ABCF3-214ENST00000480562 CT47B1P0C2W7 299 aaPredicted RBP23.53■■□□□ 1.36
ABCF3-214ENST00000480562 APOBEC3HQ6NTF7 200 aaKnown RBP23.53■■□□□ 1.36
ABCF3-214ENST00000480562 FBXO46Q6PJ61 603 aaPredicted RBP23.53■■□□□ 1.36
ABCF3-214ENST00000480562 ZDHHC15Q96MV8 337 aa23.53■■□□□ 1.36
ABCF3-214ENST00000480562 PTPN18Q99952 460 aa23.53■■□□□ 1.36
ABCF3-214ENST00000480562 MAP3K9P80192 1104 aa23.52■■□□□ 1.36
ABCF3-214ENST00000480562 VGLL4Q14135 290 aa23.52■■□□□ 1.36
ABCF3-214ENST00000480562 API5Q9BZZ5 524 aaKnown RBP23.52■■□□□ 1.36
ABCF3-214ENST00000480562 SUGT1Q9Y2Z0 365 aa23.52■■□□□ 1.36
ABCF3-214ENST00000480562 LRRFIP2Q9Y608 721 aaKnown RBP23.52■■□□□ 1.36
ABCF3-214ENST00000480562 LAMB1P07942 1786 aa23.51■■□□□ 1.35
ABCF3-214ENST00000480562 CRHR2Q13324 411 aa23.51■■□□□ 1.35
ABCF3-214ENST00000480562 MRIQ9BWK5 157 aa23.51■■□□□ 1.35
ABCF3-214ENST00000480562 TMOD2Q9NZR1 351 aa23.51■■□□□ 1.35
ABCF3-214ENST00000480562 TESPA1A2RU30 521 aaPredicted RBP23.5■■□□□ 1.35
ABCF3-214ENST00000480562 OTUD7BQ6GQQ9 843 aa23.5■■□□□ 1.35
ABCF3-214ENST00000480562 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.5■■□□□ 1.35
ABCF3-214ENST00000480562 WDR66Q8TBY9 1149 aa23.5■■□□□ 1.35
ABCF3-214ENST00000480562 CEP126Q9P2H0 1117 aa23.5■■□□□ 1.35
ABCF3-214ENST00000480562 TRIM17Q9Y577 477 aa23.5■■□□□ 1.35
ABCF3-214ENST00000480562 MAST3O60307 1309 aa23.5■■□□□ 1.35
ABCF3-214ENST00000480562 CIAO1O76071 339 aa23.49■■□□□ 1.35
ABCF3-214ENST00000480562 ATP2B3Q16720 1220 aa23.49■■□□□ 1.35
ABCF3-214ENST00000480562 HHIPL2Q6UWX4 724 aa23.49■■□□□ 1.35
ABCF3-214ENST00000480562 MS4A4AQ96JQ5 239 aa23.49■■□□□ 1.35
ABCF3-214ENST00000480562 PA2G4Q9UQ80 394 aaKnown RBP23.49■■□□□ 1.35
ABCF3-214ENST00000480562 CCER2I3L3R5 266 aa23.48■■□□□ 1.35
ABCF3-214ENST00000480562 RARSP54136 660 aaKnown RBP23.48■■□□□ 1.35
ABCF3-214ENST00000480562 FAM83AQ86UY5 434 aa23.48■■□□□ 1.35
ABCF3-214ENST00000480562 MEIS3Q99687 375 aa23.48■■□□□ 1.35
ABCF3-214ENST00000480562 FBXO3Q9UK99 471 aa23.48■■□□□ 1.35
ABCF3-214ENST00000480562 CSADQ9Y600 493 aa23.48■■□□□ 1.35
ABCF3-214ENST00000480562 MYH13Q9UKX3 1938 aa23.47■■□□□ 1.35
ABCF3-214ENST00000480562 OTOP1Q7RTM1 612 aa23.47■■□□□ 1.35
ABCF3-214ENST00000480562 BRI3BPQ8WY22 251 aa23.47■■□□□ 1.35
ABCF3-214ENST00000480562 OTUD5Q96G74 571 aa23.47■■□□□ 1.35
ABCF3-214ENST00000480562 CCL15-CCL14A0A0B4J2E2 113 aa23.46■■□□□ 1.35
ABCF3-214ENST00000480562 DIXDC1Q155Q3 683 aa23.46■■□□□ 1.35
ABCF3-214ENST00000480562 CCL15Q16663 113 aa23.46■■□□□ 1.35
ABCF3-214ENST00000480562 FKBP1CQ5VVH2 108 aa23.46■■□□□ 1.35
ABCF3-214ENST00000480562 CD99L2Q8TCZ2 262 aa23.46■■□□□ 1.35
ABCF3-214ENST00000480562 PRDX5P30044 214 aa23.45■■□□□ 1.34
ABCF3-214ENST00000480562 IL15P40933 162 aaPredicted RBP23.45■■□□□ 1.34
ABCF3-214ENST00000480562 PHKA1P46020 1223 aa23.45■■□□□ 1.34
ABCF3-214ENST00000480562 GTF2A2P52657 109 aa23.45■■□□□ 1.34
ABCF3-214ENST00000480562 ERO1AQ96HE7 468 aa23.45■■□□□ 1.34
ABCF3-214ENST00000480562 WRNIP1Q96S55 665 aa23.45■■□□□ 1.34
ABCF3-214ENST00000480562 GNL3LQ9NVN8 582 aaKnown RBP23.45■■□□□ 1.34
ABCF3-214ENST00000480562 DAGLAQ9Y4D2 1042 aa23.45■■□□□ 1.34
ABCF3-214ENST00000480562 SNCAIPQ9Y6H5 919 aa23.45■■□□□ 1.34
ABCF3-214ENST00000480562 PDE4DIPQ5VU43 2346 aa23.44■■□□□ 1.34
ABCF3-214ENST00000480562 ADORA1P30542 326 aa23.44■■□□□ 1.34
ABCF3-214ENST00000480562 MIGA2Q7L4E1 593 aa23.44■■□□□ 1.34
ABCF3-214ENST00000480562 ZKSCAN4Q969J2 545 aaPredicted RBP23.44■■□□□ 1.34
ABCF3-214ENST00000480562 HDAC5Q9UQL6 1122 aa23.44■■□□□ 1.34
ABCF3-214ENST00000480562 SPDYE5A6NIY4 337 aa23.43■■□□□ 1.34
ABCF3-214ENST00000480562 CAP1Q01518 475 aa23.43■■□□□ 1.34
ABCF3-214ENST00000480562 SP3Q02447 781 aa23.43■■□□□ 1.34
ABCF3-214ENST00000480562 CDC42EP5Q6NZY7 148 aa23.43■■□□□ 1.34
ABCF3-214ENST00000480562 COPRSQ9NQ92 184 aa23.43■■□□□ 1.34
ABCF3-214ENST00000480562 LDHBP07195 334 aaKnown RBP23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms