RNA–Protein interactions for RNA: ENST00000478503.6

SH3D19-207, Transcript of SH3 domain containing 19, humanhuman

TSL 2

Gene SH3D19, Length 4,038 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-207ENST00000478503 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.07□□□□□ -1.28
SH3D19-207ENST00000478503 MED23Q9ULK4 1368 aa7.07□□□□□ -1.28
SH3D19-207ENST00000478503 MAST3O60307 1309 aa7.07□□□□□ -1.28
SH3D19-207ENST00000478503 SLIT3O75094 1523 aa7.07□□□□□ -1.28
SH3D19-207ENST00000478503 NR1I2O75469 434 aa7.07□□□□□ -1.28
SH3D19-207ENST00000478503 IL15P40933 162 aaPredicted RBP7.07□□□□□ -1.28
SH3D19-207ENST00000478503 IFIT5Q13325 482 aaKnown RBP7.07□□□□□ -1.28
SH3D19-207ENST00000478503 NBPF5PQ86XG9 351 aaPredicted RBP7.07□□□□□ -1.28
SH3D19-207ENST00000478503 NKX2-3Q8TAU0 364 aa7.07□□□□□ -1.28
SH3D19-207ENST00000478503 KDM3BQ7LBC6 1761 aa7.07□□□□□ -1.28
SH3D19-207ENST00000478503 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.06□□□□□ -1.28
SH3D19-207ENST00000478503 E7EWF7 191 aa7.06□□□□□ -1.28
SH3D19-207ENST00000478503 KIF6Q6ZMV9 814 aa7.06□□□□□ -1.28
SH3D19-207ENST00000478503 PUF60Q9UHX1 559 aaKnown RBP7.06□□□□□ -1.28
SH3D19-207ENST00000478503 SRCAPQ6ZRS2 3230 aa7.06□□□□□ -1.28
SH3D19-207ENST00000478503 IBSPP21815 317 aaPredicted RBP7.06□□□□□ -1.28
SH3D19-207ENST00000478503 ITGA6P23229 1130 aa7.06□□□□□ -1.28
SH3D19-207ENST00000478503 TCIRG1Q13488 830 aa7.06□□□□□ -1.28
SH3D19-207ENST00000478503 CCDC158Q5M9N0 1113 aa7.06□□□□□ -1.28
SH3D19-207ENST00000478503 C11orf96Q7Z7L8 435 aa7.06□□□□□ -1.28
SH3D19-207ENST00000478503 CCDC24Q8N4L8 307 aa7.06□□□□□ -1.28
SH3D19-207ENST00000478503 SLC4A9Q96Q91 983 aa7.06□□□□□ -1.28
SH3D19-207ENST00000478503 ATG3Q9NT62 314 aa7.06□□□□□ -1.28
SH3D19-207ENST00000478503 U3KPZ7 1027 aaPredicted RBP7.06□□□□□ -1.28
SH3D19-207ENST00000478503 PTPDC1A2A3K4 754 aa7.06□□□□□ -1.28
SH3D19-207ENST00000478503 WTIPA6NIX2 430 aaPredicted RBP7.06□□□□□ -1.28
SH3D19-207ENST00000478503 ZRANB2O95218 330 aaKnown RBP eCLIP7.06□□□□□ -1.28
SH3D19-207ENST00000478503 MAP2K1Q02750 393 aaPredicted RBP7.06□□□□□ -1.28
SH3D19-207ENST00000478503 CEP120Q8N960 986 aa7.06□□□□□ -1.28
SH3D19-207ENST00000478503 CCDC191Q8NCU4 936 aa7.06□□□□□ -1.28
SH3D19-207ENST00000478503 GTF3C6Q969F1 213 aa7.06□□□□□ -1.28
SH3D19-207ENST00000478503 PDLIM2Q96JY6 352 aa7.06□□□□□ -1.28
SH3D19-207ENST00000478503 CARD10Q9BWT7 1032 aa7.06□□□□□ -1.28
SH3D19-207ENST00000478503 TNMDQ9H2S6 317 aa7.06□□□□□ -1.28
SH3D19-207ENST00000478503 TOMM22Q9NS69 142 aa7.06□□□□□ -1.28
SH3D19-207ENST00000478503 FAM13BQ9NYF5 915 aa7.06□□□□□ -1.28
SH3D19-207ENST00000478503 CACNA1FO60840 1977 aa7.06□□□□□ -1.28
SH3D19-207ENST00000478503 CAMTA1Q9Y6Y1 1673 aa7.06□□□□□ -1.28
SH3D19-207ENST00000478503 DRC7Q8IY82 874 aa7.05□□□□□ -1.28
SH3D19-207ENST00000478503 LEO1Q8WVC0 666 aaPredicted RBP7.05□□□□□ -1.28
SH3D19-207ENST00000478503 PGBD1Q96JS3 809 aa7.05□□□□□ -1.28
SH3D19-207ENST00000478503 MYL10Q9BUA6 226 aa7.05□□□□□ -1.28
SH3D19-207ENST00000478503 NUP62CLQ9H1M0 184 aa7.05□□□□□ -1.28
SH3D19-207ENST00000478503 FBXO9Q9UK97 447 aaPredicted RBP7.05□□□□□ -1.28
SH3D19-207ENST00000478503 DIS3Q9Y2L1 958 aaKnown RBP7.05□□□□□ -1.28
SH3D19-207ENST00000478503 ERVV-2B6SEH9 535 aa7.05□□□□□ -1.28
SH3D19-207ENST00000478503 RNF113AO15541 343 aaKnown RBP7.05□□□□□ -1.28
SH3D19-207ENST00000478503 HOXA2O43364 376 aa7.05□□□□□ -1.28
SH3D19-207ENST00000478503 GTF2F1P35269 517 aaKnown RBP eCLIP7.05□□□□□ -1.28
SH3D19-207ENST00000478503 PDE4DQ08499 809 aa7.05□□□□□ -1.28
SH3D19-207ENST00000478503 ANKRD1Q15327 319 aa7.05□□□□□ -1.28
SH3D19-207ENST00000478503 ISM2Q6H9L7 571 aa7.05□□□□□ -1.28
SH3D19-207ENST00000478503 BICDL1Q6ZP65 573 aa7.05□□□□□ -1.28
SH3D19-207ENST00000478503 AIFM3Q96NN9 605 aa7.05□□□□□ -1.28
SH3D19-207ENST00000478503 CGNQ9P2M7 1197 aaKnown RBP7.05□□□□□ -1.28
SH3D19-207ENST00000478503 PRR12Q9ULL5 1215 aa7.05□□□□□ -1.28
SH3D19-207ENST00000478503 NOL7Q9UMY1 257 aaKnown RBP7.05□□□□□ -1.28
SH3D19-207ENST00000478503 ZKSCAN5Q9Y2L8 839 aa7.05□□□□□ -1.28
SH3D19-207ENST00000478503 UBE2Q2LH0YL09 131 aa7.05□□□□□ -1.28
SH3D19-207ENST00000478503 CTDNEP1O95476 244 aa7.05□□□□□ -1.28
SH3D19-207ENST00000478503 FGAP02671 866 aa7.05□□□□□ -1.28
SH3D19-207ENST00000478503 SLC9C2Q5TAH2 1124 aa7.05□□□□□ -1.28
SH3D19-207ENST00000478503 DHX32Q7L7V1 743 aaKnown RBP7.05□□□□□ -1.28
SH3D19-207ENST00000478503 KCNB2Q92953 911 aa7.05□□□□□ -1.28
SH3D19-207ENST00000478503 DNAJC25Q9H1X3 360 aa7.05□□□□□ -1.28
SH3D19-207ENST00000478503 LMO7Q8WWI1 1683 aa7.05□□□□□ -1.28
SH3D19-207ENST00000478503 IRS4O14654 1257 aaPredicted RBP7.04□□□□□ -1.28
SH3D19-207ENST00000478503 PDCP20941 246 aa7.04□□□□□ -1.28
SH3D19-207ENST00000478503 ATP2B3Q16720 1220 aa7.04□□□□□ -1.28
SH3D19-207ENST00000478503 ANO6Q4KMQ2 910 aa7.04□□□□□ -1.28
SH3D19-207ENST00000478503 RRP12Q5JTH9 1297 aaKnown RBP7.04□□□□□ -1.28
SH3D19-207ENST00000478503 IL17RAQ96F46 866 aa7.04□□□□□ -1.28
SH3D19-207ENST00000478503 CALR3Q96L12 384 aaKnown RBP7.04□□□□□ -1.28
SH3D19-207ENST00000478503 SEC31BQ9NQW1 1179 aa7.04□□□□□ -1.28
SH3D19-207ENST00000478503 HMG20BQ9P0W2 317 aa7.04□□□□□ -1.28
SH3D19-207ENST00000478503 STARD3NLO95772 234 aa7.04□□□□□ -1.28
SH3D19-207ENST00000478503 PHKA1P46020 1223 aa7.04□□□□□ -1.28
SH3D19-207ENST00000478503 ME1P48163 572 aa7.04□□□□□ -1.28
SH3D19-207ENST00000478503 TSNAXIP1Q2TAA8 658 aa7.04□□□□□ -1.28
SH3D19-207ENST00000478503 ZMYM1Q5SVZ6 1142 aa7.04□□□□□ -1.28
SH3D19-207ENST00000478503 MEX3CQ5U5Q3 659 aaKnown RBP7.04□□□□□ -1.28
SH3D19-207ENST00000478503 MSL3Q8N5Y2 521 aaKnown RBP7.04□□□□□ -1.28
SH3D19-207ENST00000478503 UBXN4Q92575 508 aa7.04□□□□□ -1.28
SH3D19-207ENST00000478503 SENP2Q9HC62 589 aa7.04□□□□□ -1.28
SH3D19-207ENST00000478503 CCDC39Q9UFE4 941 aa7.04□□□□□ -1.28
SH3D19-207ENST00000478503 TMA7Q9Y2S6 64 aaKnown RBP7.04□□□□□ -1.28
SH3D19-207ENST00000478503 MCAMP43121 646 aa7.04□□□□□ -1.28
SH3D19-207ENST00000478503 MMP14P50281 582 aa7.04□□□□□ -1.28
SH3D19-207ENST00000478503 KRT32Q14532 448 aa7.04□□□□□ -1.28
SH3D19-207ENST00000478503 MAP3K11Q16584 847 aa7.04□□□□□ -1.28
SH3D19-207ENST00000478503 SLC4A8Q2Y0W8 1093 aa7.04□□□□□ -1.28
SH3D19-207ENST00000478503 FAM182BQ5T319 152 aa7.04□□□□□ -1.28
SH3D19-207ENST00000478503 C1orf131Q8NDD1 294 aaKnown RBP7.04□□□□□ -1.28
SH3D19-207ENST00000478503 NSUN7Q8NE18 718 aaKnown RBP7.04□□□□□ -1.28
SH3D19-207ENST00000478503 AK7Q96M32 723 aa7.04□□□□□ -1.28
SH3D19-207ENST00000478503 USP28Q96RU2 1077 aa7.04□□□□□ -1.28
SH3D19-207ENST00000478503 TSPAN18Q96SJ8 248 aa7.04□□□□□ -1.28
SH3D19-207ENST00000478503 UBA5Q9GZZ9 404 aa7.04□□□□□ -1.28
SH3D19-207ENST00000478503 TCEAL9Q9UHQ7 104 aa7.04□□□□□ -1.28
SH3D19-207ENST00000478503 NRBP1Q9UHY1 535 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms