RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 RASSF7Q02833 373 aa6.63□□□□□ -1.35
SMARCA1-204ENST00000478420 AP3B2Q13367 1082 aa6.63□□□□□ -1.35
SMARCA1-204ENST00000478420 DUOXA2Q1HG44 320 aa6.63□□□□□ -1.35
SMARCA1-204ENST00000478420 SHISA2Q6UWI4 295 aa6.63□□□□□ -1.35
SMARCA1-204ENST00000478420 USP31Q70CQ4 1352 aa6.63□□□□□ -1.35
SMARCA1-204ENST00000478420 SV2BQ7L1I2 683 aa6.63□□□□□ -1.35
SMARCA1-204ENST00000478420 LENG1Q96BZ8 264 aaPredicted RBP6.63□□□□□ -1.35
SMARCA1-204ENST00000478420 DCAF5Q96JK2 942 aa6.63□□□□□ -1.35
SMARCA1-204ENST00000478420 NECAB3Q96P71 396 aaPredicted RBP6.63□□□□□ -1.35
SMARCA1-204ENST00000478420 USP26Q9BXU7 913 aa6.63□□□□□ -1.35
SMARCA1-204ENST00000478420 MRPL18Q9H0U6 180 aaKnown RBP6.63□□□□□ -1.35
SMARCA1-204ENST00000478420 KCNK4Q9NYG8 393 aa6.63□□□□□ -1.35
SMARCA1-204ENST00000478420 USP21Q9UK80 565 aa6.63□□□□□ -1.35
SMARCA1-204ENST00000478420 SAMM50Q9Y512 469 aa6.63□□□□□ -1.35
SMARCA1-204ENST00000478420 ADAM11O75078 769 aa6.62□□□□□ -1.35
SMARCA1-204ENST00000478420 SELPP16109 830 aa6.62□□□□□ -1.35
SMARCA1-204ENST00000478420 NRG1Q02297 640 aaPredicted RBP6.62□□□□□ -1.35
SMARCA1-204ENST00000478420 CCDC85BQ15834 202 aaPredicted RBP6.62□□□□□ -1.35
SMARCA1-204ENST00000478420 TSNAXIP1Q2TAA8 658 aa6.62□□□□□ -1.35
SMARCA1-204ENST00000478420 ZNF428Q96B54 188 aa6.62□□□□□ -1.35
SMARCA1-204ENST00000478420 CORO1BQ9BR76 489 aa6.62□□□□□ -1.35
SMARCA1-204ENST00000478420 BACH2Q9BYV9 841 aa6.62□□□□□ -1.35
SMARCA1-204ENST00000478420 KRBA1A5PL33 1030 aa6.61□□□□□ -1.35
SMARCA1-204ENST00000478420 ENC1O14682 589 aa6.61□□□□□ -1.35
SMARCA1-204ENST00000478420 GDF11O95390 407 aa6.61□□□□□ -1.35
SMARCA1-204ENST00000478420 NME2P22392 152 aa6.61□□□□□ -1.35
SMARCA1-204ENST00000478420 MAOBP27338 520 aa6.61□□□□□ -1.35
SMARCA1-204ENST00000478420 POU4F3Q15319 338 aa6.61□□□□□ -1.35
SMARCA1-204ENST00000478420 ACAD11Q709F0 780 aa6.61□□□□□ -1.35
SMARCA1-204ENST00000478420 SULF2Q8IWU5 870 aa6.61□□□□□ -1.35
SMARCA1-204ENST00000478420 TMEM87AQ8NBN3 555 aa6.61□□□□□ -1.35
SMARCA1-204ENST00000478420 TRIM56Q9BRZ2 755 aaKnown RBP6.61□□□□□ -1.35
SMARCA1-204ENST00000478420 KIAA1522Q9P206 1035 aaPredicted RBP6.61□□□□□ -1.35
SMARCA1-204ENST00000478420 CELA3AP09093 270 aa6.6□□□□□ -1.35
SMARCA1-204ENST00000478420 GSK3AP49840 483 aa6.6□□□□□ -1.35
SMARCA1-204ENST00000478420 HP1BP3Q5SSJ5 553 aaPredicted RBP6.6□□□□□ -1.35
SMARCA1-204ENST00000478420 TMEM130Q8N3G9 435 aa6.6□□□□□ -1.35
SMARCA1-204ENST00000478420 TMEM151AQ8N4L1 468 aa6.6□□□□□ -1.35
SMARCA1-204ENST00000478420 UBASH3BQ8TF42 649 aa6.6□□□□□ -1.35
SMARCA1-204ENST00000478420 NOC4LQ9BVI4 516 aaKnown RBP6.6□□□□□ -1.35
SMARCA1-204ENST00000478420 EMILIN2Q9BXX0 1053 aa6.6□□□□□ -1.35
SMARCA1-204ENST00000478420 NRSN2Q9GZP1 204 aa6.6□□□□□ -1.35
SMARCA1-204ENST00000478420 LOC100289279A0A1B0GTE1 492 aa6.59□□□□□ -1.35
SMARCA1-204ENST00000478420 PAGE1O75459 146 aa6.59□□□□□ -1.35
SMARCA1-204ENST00000478420 WISP1O95388 367 aa6.59□□□□□ -1.35
SMARCA1-204ENST00000478420 RLBP1P12271 317 aa6.59□□□□□ -1.35
SMARCA1-204ENST00000478420 ARNTP27540 789 aa6.59□□□□□ -1.35
SMARCA1-204ENST00000478420 HNRNPUQ00839 825 aaKnown RBP eCLIP6.59□□□□□ -1.35
SMARCA1-204ENST00000478420 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.59□□□□□ -1.35
SMARCA1-204ENST00000478420 RUSC1Q9BVN2 902 aa6.59□□□□□ -1.35
SMARCA1-204ENST00000478420 AKTIPQ9H8T0 292 aa6.59□□□□□ -1.35
SMARCA1-204ENST00000478420 CBX8Q9HC52 389 aa6.59□□□□□ -1.35
SMARCA1-204ENST00000478420 F8W735 103 aaPredicted RBP6.58□□□□□ -1.36
SMARCA1-204ENST00000478420 RECKO95980 971 aa6.58□□□□□ -1.36
SMARCA1-204ENST00000478420 GSTP1P09211 210 aaKnown RBP6.58□□□□□ -1.36
SMARCA1-204ENST00000478420 CHRNA4P43681 627 aa6.58□□□□□ -1.36
SMARCA1-204ENST00000478420 LRRC14Q15048 493 aa6.58□□□□□ -1.36
SMARCA1-204ENST00000478420 PCNX4Q63HM2 1172 aa6.58□□□□□ -1.36
SMARCA1-204ENST00000478420 KIAA1211Q6ZU35 1233 aa6.58□□□□□ -1.36
SMARCA1-204ENST00000478420 CD163Q86VB7 1156 aa6.58□□□□□ -1.36
SMARCA1-204ENST00000478420 RNF208Q9H0X6 261 aa6.58□□□□□ -1.36
SMARCA1-204ENST00000478420 C1QTNF9BB2RNN3 333 aa6.57□□□□□ -1.36
SMARCA1-204ENST00000478420 E9PSI1 815 aa6.57□□□□□ -1.36
SMARCA1-204ENST00000478420 ECEL1O95672 775 aa6.57□□□□□ -1.36
SMARCA1-204ENST00000478420 BMP6P22004 513 aa6.57□□□□□ -1.36
SMARCA1-204ENST00000478420 ADGRE1Q14246 886 aa6.57□□□□□ -1.36
SMARCA1-204ENST00000478420 PDE3AQ14432 1141 aa6.57□□□□□ -1.36
SMARCA1-204ENST00000478420 MBTPS1Q14703 1052 aa6.57□□□□□ -1.36
SMARCA1-204ENST00000478420 MAP3K11Q16584 847 aa6.57□□□□□ -1.36
SMARCA1-204ENST00000478420 EXOSC6Q5RKV6 272 aaKnown RBP6.57□□□□□ -1.36
SMARCA1-204ENST00000478420 TTBK2Q6IQ55 1244 aa6.57□□□□□ -1.36
SMARCA1-204ENST00000478420 AGGF1Q8N302 714 aaeCLIP6.57□□□□□ -1.36
SMARCA1-204ENST00000478420 STK35Q8TDR2 534 aa6.57□□□□□ -1.36
SMARCA1-204ENST00000478420 WFDC12Q8WWY7 111 aa6.57□□□□□ -1.36
SMARCA1-204ENST00000478420 KCNB2Q92953 911 aa6.57□□□□□ -1.36
SMARCA1-204ENST00000478420 ZC3H12CQ9C0D7 883 aaKnown RBP6.57□□□□□ -1.36
SMARCA1-204ENST00000478420 METTL5Q9NRN9 209 aaKnown RBP6.57□□□□□ -1.36
SMARCA1-204ENST00000478420 CYP8B1Q9UNU6 501 aa6.57□□□□□ -1.36
SMARCA1-204ENST00000478420 MEGF11A6BM72 1044 aa6.56□□□□□ -1.36
SMARCA1-204ENST00000478420 SCAMP3O14828 347 aaKnown RBP6.56□□□□□ -1.36
SMARCA1-204ENST00000478420 ALX3O95076 343 aa6.56□□□□□ -1.36
SMARCA1-204ENST00000478420 DLGAP3O95886 979 aa6.56□□□□□ -1.36
SMARCA1-204ENST00000478420 CTSBP07858 339 aa6.56□□□□□ -1.36
SMARCA1-204ENST00000478420 LMNB1P20700 586 aa6.56□□□□□ -1.36
SMARCA1-204ENST00000478420 ZNF76P36508 570 aa6.56□□□□□ -1.36
SMARCA1-204ENST00000478420 IREB2P48200 963 aaKnown RBP6.56□□□□□ -1.36
SMARCA1-204ENST00000478420 LIG3P49916 1009 aa6.56□□□□□ -1.36
SMARCA1-204ENST00000478420 LDLRAD1Q5T700 205 aa6.56□□□□□ -1.36
SMARCA1-204ENST00000478420 NUTM2GQ5VZR2 741 aa6.56□□□□□ -1.36
SMARCA1-204ENST00000478420 MAP1SQ66K74 1059 aaPredicted RBP6.56□□□□□ -1.36
SMARCA1-204ENST00000478420 LLGL2Q6P1M3 1020 aa6.56□□□□□ -1.36
SMARCA1-204ENST00000478420 HS2ST1Q7LGA3 356 aa6.56□□□□□ -1.36
SMARCA1-204ENST00000478420 PDZD3Q86UT5 571 aa6.56□□□□□ -1.36
SMARCA1-204ENST00000478420 TXNRD3Q86VQ6 643 aa6.56□□□□□ -1.36
SMARCA1-204ENST00000478420 RAD18Q9NS91 495 aa6.56□□□□□ -1.36
SMARCA1-204ENST00000478420 KRT82Q9NSB4 513 aa6.56□□□□□ -1.36
SMARCA1-204ENST00000478420 GLB1P16278 677 aa6.55□□□□□ -1.36
SMARCA1-204ENST00000478420 NOS3P29474 1203 aa6.55□□□□□ -1.36
SMARCA1-204ENST00000478420 RPS26P62854 115 aaKnown RBP6.55□□□□□ -1.36
SMARCA1-204ENST00000478420 ZNF252P-AS1Q0IIN9 211 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms