RNA–Protein interactions for RNA: ENST00000476994.1

SREBF1-211, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-211ENST00000476994 DOCK2Q92608 1830 aa21.6■■□□□ 1.05
SREBF1-211ENST00000476994 IFIT2P09913 472 aaKnown RBP21.6■■□□□ 1.05
SREBF1-211ENST00000476994 FAM84BQ96KN1 310 aaPredicted RBP21.6■■□□□ 1.05
SREBF1-211ENST00000476994 NEUROD6Q96NK8 337 aa21.6■■□□□ 1.05
SREBF1-211ENST00000476994 MYH7P12883 1935 aa21.6■■□□□ 1.05
SREBF1-211ENST00000476994 USP17L3A6NCW0 530 aa21.59■■□□□ 1.05
SREBF1-211ENST00000476994 USP17L4A6NCW7 530 aa21.59■■□□□ 1.05
SREBF1-211ENST00000476994 ZBTB22O15209 634 aa21.59■■□□□ 1.05
SREBF1-211ENST00000476994 PDE1AP54750 535 aa21.59■■□□□ 1.05
SREBF1-211ENST00000476994 USP17L1Q7RTZ2 530 aa21.59■■□□□ 1.05
SREBF1-211ENST00000476994 FBXO33Q7Z6M2 555 aa21.59■■□□□ 1.05
SREBF1-211ENST00000476994 OSBPL3Q9H4L5 887 aa21.59■■□□□ 1.05
SREBF1-211ENST00000476994 GGA3Q9NZ52 723 aa21.59■■□□□ 1.05
SREBF1-211ENST00000476994 ZBTB47Q9UFB7 747 aaPredicted RBP21.59■■□□□ 1.05
SREBF1-211ENST00000476994 CASP8AP2Q9UKL3 1982 aa21.58■■□□□ 1.05
SREBF1-211ENST00000476994 EGFRP00533 1210 aa21.58■■□□□ 1.05
SREBF1-211ENST00000476994 USP17L8P0C7I0 530 aa21.58■■□□□ 1.05
SREBF1-211ENST00000476994 MX1P20591 662 aa21.58■■□□□ 1.05
SREBF1-211ENST00000476994 PHKA1P46020 1223 aa21.58■■□□□ 1.05
SREBF1-211ENST00000476994 KCNJ4P48050 445 aa21.58■■□□□ 1.05
SREBF1-211ENST00000476994 PI4K2BQ8TCG2 481 aa21.58■■□□□ 1.05
SREBF1-211ENST00000476994 CCDC102AQ96A19 550 aa21.58■■□□□ 1.05
SREBF1-211ENST00000476994 COL1A1P02452 1464 aaPredicted RBP21.58■■□□□ 1.04
SREBF1-211ENST00000476994 ADM5C9JUS6 153 aa21.57■■□□□ 1.04
SREBF1-211ENST00000476994 GYG1P46976 350 aa21.57■■□□□ 1.04
SREBF1-211ENST00000476994 TSHZ3Q63HK5 1081 aa21.57■■□□□ 1.04
SREBF1-211ENST00000476994 CCDC102BQ68D86 513 aa21.57■■□□□ 1.04
SREBF1-211ENST00000476994 RGMBQ6NW40 437 aa21.57■■□□□ 1.04
SREBF1-211ENST00000476994 BCL11AQ9H165 835 aa21.57■■□□□ 1.04
SREBF1-211ENST00000476994 AOX1Q06278 1338 aa21.56■■□□□ 1.04
SREBF1-211ENST00000476994 TTC41PQ6P2S7 1318 aa21.56■■□□□ 1.04
SREBF1-211ENST00000476994 ARID4AP29374 1257 aaPredicted RBP21.56■■□□□ 1.04
SREBF1-211ENST00000476994 BCAMP50895 628 aa21.56■■□□□ 1.04
SREBF1-211ENST00000476994 ZNF280AP59817 542 aaPredicted RBP21.56■■□□□ 1.04
SREBF1-211ENST00000476994 OGFOD1Q8N543 542 aa21.56■■□□□ 1.04
SREBF1-211ENST00000476994 ABHD8Q96I13 439 aa21.56■■□□□ 1.04
SREBF1-211ENST00000476994 ZNF512BQ96KM6 892 aaPredicted RBP21.56■■□□□ 1.04
SREBF1-211ENST00000476994 ECHDC1Q9NTX5 307 aa21.56■■□□□ 1.04
SREBF1-211ENST00000476994 TSKSQ9UJT2 592 aa21.56■■□□□ 1.04
SREBF1-211ENST00000476994 ZNF157P51786 506 aaPredicted RBP21.55■■□□□ 1.04
SREBF1-211ENST00000476994 SCARF1Q14162 830 aa21.55■■□□□ 1.04
SREBF1-211ENST00000476994 FBXW7Q969H0 707 aa21.55■■□□□ 1.04
SREBF1-211ENST00000476994 MYOZ2Q9NPC6 264 aa21.55■■□□□ 1.04
SREBF1-211ENST00000476994 MYO3BQ8WXR4 1341 aa21.55■■□□□ 1.04
SREBF1-211ENST00000476994 ATP5JP18859 108 aa21.54■■□□□ 1.04
SREBF1-211ENST00000476994 ANGEL2Q5VTE6 544 aaKnown RBP21.54■■□□□ 1.04
SREBF1-211ENST00000476994 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.54■■□□□ 1.04
SREBF1-211ENST00000476994 HIBADHP31937 336 aaKnown RBP21.53■■□□□ 1.04
SREBF1-211ENST00000476994 DLK2Q6UY11 383 aa21.53■■□□□ 1.04
SREBF1-211ENST00000476994 COA1Q9GZY4 146 aa21.53■■□□□ 1.04
SREBF1-211ENST00000476994 PITPNM2Q9BZ72 1349 aa21.53■■□□□ 1.04
SREBF1-211ENST00000476994 IL1R1P14778 569 aa21.52■■□□□ 1.04
SREBF1-211ENST00000476994 MCAMP43121 646 aa21.52■■□□□ 1.04
SREBF1-211ENST00000476994 RGS3P49796 1198 aa21.52■■□□□ 1.04
SREBF1-211ENST00000476994 MMP14P50281 582 aa21.52■■□□□ 1.04
SREBF1-211ENST00000476994 TDRD7Q8NHU6 1098 aaKnown RBP21.52■■□□□ 1.04
SREBF1-211ENST00000476994 CDCA5Q96FF9 252 aa21.52■■□□□ 1.04
SREBF1-211ENST00000476994 FKBP1BP68106 108 aa21.51■■□□□ 1.03
SREBF1-211ENST00000476994 RASGRF1Q13972 1273 aa21.51■■□□□ 1.03
SREBF1-211ENST00000476994 CAVIN4Q5BKX8 364 aa21.51■■□□□ 1.03
SREBF1-211ENST00000476994 CCDC158Q5M9N0 1113 aa21.51■■□□□ 1.03
SREBF1-211ENST00000476994 CD209Q9NNX6 404 aa21.51■■□□□ 1.03
SREBF1-211ENST00000476994 GLRX3O76003 335 aaKnown RBP21.5■■□□□ 1.03
SREBF1-211ENST00000476994 UQCRFS1P1P0C7P4 283 aa21.5■■□□□ 1.03
SREBF1-211ENST00000476994 GSPT1P15170 499 aaKnown RBP21.5■■□□□ 1.03
SREBF1-211ENST00000476994 TTC39AQ5SRH9 613 aa21.5■■□□□ 1.03
SREBF1-211ENST00000476994 GORABQ5T7V8 394 aa21.5■■□□□ 1.03
SREBF1-211ENST00000476994 STRIP1Q5VSL9 837 aa21.5■■□□□ 1.03
SREBF1-211ENST00000476994 ZNF804AQ7Z570 1209 aa21.5■■□□□ 1.03
SREBF1-211ENST00000476994 GPATCH3Q96I76 525 aa21.5■■□□□ 1.03
SREBF1-211ENST00000476994 GMLQ99445 158 aa21.5■■□□□ 1.03
SREBF1-211ENST00000476994 PAPPA2Q9BXP8 1791 aa21.5■■□□□ 1.03
SREBF1-211ENST00000476994 MAST2Q6P0Q8 1798 aa21.49■■□□□ 1.03
SREBF1-211ENST00000476994 TTC22Q5TAA0 569 aa21.49■■□□□ 1.03
SREBF1-211ENST00000476994 PI16Q6UXB8 463 aa21.49■■□□□ 1.03
SREBF1-211ENST00000476994 REM2Q8IYK8 340 aaPredicted RBP21.49■■□□□ 1.03
SREBF1-211ENST00000476994 HAUS7Q99871 368 aa21.49■■□□□ 1.03
SREBF1-211ENST00000476994 BOLA2Q9H3K6 86 aa21.49■■□□□ 1.03
SREBF1-211ENST00000476994 HMG20BQ9P0W2 317 aa21.49■■□□□ 1.03
SREBF1-211ENST00000476994 HDAC9Q9UKV0 1011 aa21.49■■□□□ 1.03
SREBF1-211ENST00000476994 ASTN2O75129 1339 aaPredicted RBP21.49■■□□□ 1.03
SREBF1-211ENST00000476994 PDS5AQ29RF7 1337 aaKnown RBP21.49■■□□□ 1.03
SREBF1-211ENST00000476994 CCDC85CA6NKD9 419 aa21.48■■□□□ 1.03
SREBF1-211ENST00000476994 SEMA3EO15041 775 aa21.48■■□□□ 1.03
SREBF1-211ENST00000476994 ERC2O15083 957 aa21.48■■□□□ 1.03
SREBF1-211ENST00000476994 NF2P35240 595 aa21.48■■□□□ 1.03
SREBF1-211ENST00000476994 SAGE1Q9NXZ1 904 aa21.48■■□□□ 1.03
SREBF1-211ENST00000476994 IQSEC3Q9UPP2 1182 aaPredicted RBP21.48■■□□□ 1.03
SREBF1-211ENST00000476994 FAM155AB1AL88 458 aaPredicted RBP21.47■■□□□ 1.03
SREBF1-211ENST00000476994 KIF23Q02241 960 aaPredicted RBP21.47■■□□□ 1.03
SREBF1-211ENST00000476994 DACT2Q5SW24 774 aa21.47■■□□□ 1.03
SREBF1-211ENST00000476994 TTLL5Q6EMB2 1281 aa21.47■■□□□ 1.03
SREBF1-211ENST00000476994 NDUFB9Q9Y6M9 179 aa21.47■■□□□ 1.03
SREBF1-211ENST00000476994 SLC10A3P09131 477 aa21.46■■□□□ 1.03
SREBF1-211ENST00000476994 TTLL12Q14166 644 aaPredicted RBP21.46■■□□□ 1.03
SREBF1-211ENST00000476994 VPS37DQ86XT2 251 aa21.46■■□□□ 1.03
SREBF1-211ENST00000476994 SPATA5Q8NB90 893 aa21.46■■□□□ 1.03
SREBF1-211ENST00000476994 GNL3LQ9NVN8 582 aaKnown RBP21.46■■□□□ 1.03
SREBF1-211ENST00000476994 FAM205AQ6ZU69 1335 aa21.46■■□□□ 1.03
SREBF1-211ENST00000476994 ZAP70P43403 619 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms