RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 SUGT1Q9Y2Z0 365 aa29.68■■■□□ 2.34
CPNE1-223ENST00000475146 MAST3O60307 1309 aa29.68■■■□□ 2.34
CPNE1-223ENST00000475146 SEMA3EO15041 775 aa29.67■■■□□ 2.34
CPNE1-223ENST00000475146 PAPPA2Q9BXP8 1791 aa29.67■■■□□ 2.34
CPNE1-223ENST00000475146 TTLL12Q14166 644 aaPredicted RBP29.66■■■□□ 2.34
CPNE1-223ENST00000475146 TEKT1Q969V4 418 aa29.66■■■□□ 2.34
CPNE1-223ENST00000475146 DEFB129Q9H1M3 183 aa29.66■■■□□ 2.34
CPNE1-223ENST00000475146 FKBP1BP68106 108 aa29.65■■■□□ 2.34
CPNE1-223ENST00000475146 HDLBPQ00341 1268 aaKnown RBP29.65■■■□□ 2.34
CPNE1-223ENST00000475146 GORABQ5T7V8 394 aa29.65■■■□□ 2.34
CPNE1-223ENST00000475146 RGMBQ6NW40 437 aa29.65■■■□□ 2.34
CPNE1-223ENST00000475146 AIDAQ96BJ3 306 aa29.65■■■□□ 2.34
CPNE1-223ENST00000475146 TDRD3Q9H7E2 651 aaKnown RBP29.65■■■□□ 2.34
CPNE1-223ENST00000475146 THSD7BQ9C0I4 1608 aa29.64■■■□□ 2.34
CPNE1-223ENST00000475146 AOC2O75106 756 aa29.64■■■□□ 2.34
CPNE1-223ENST00000475146 SPDYE2Q495Y8 402 aa29.64■■■□□ 2.34
CPNE1-223ENST00000475146 ZNF70Q9UC06 446 aaPredicted RBP29.64■■■□□ 2.34
CPNE1-223ENST00000475146 RASGRF1Q13972 1273 aa29.63■■■□□ 2.33
CPNE1-223ENST00000475146 PPP2R3BQ9Y5P8 575 aa29.63■■■□□ 2.33
CPNE1-223ENST00000475146 ZNF157P51786 506 aaPredicted RBP29.62■■■□□ 2.33
CPNE1-223ENST00000475146 MAP2K1Q02750 393 aaPredicted RBP29.62■■■□□ 2.33
CPNE1-223ENST00000475146 MOB2Q70IA6 237 aa29.62■■■□□ 2.33
CPNE1-223ENST00000475146 CHMP4BQ9H444 224 aaKnown RBP29.62■■■□□ 2.33
CPNE1-223ENST00000475146 NOP58Q9Y2X3 529 aaKnown RBP29.62■■■□□ 2.33
CPNE1-223ENST00000475146 LDHBP07195 334 aaKnown RBP29.61■■■□□ 2.33
CPNE1-223ENST00000475146 PRDX5P30044 214 aa29.61■■■□□ 2.33
CPNE1-223ENST00000475146 MAP2K2P36507 400 aa29.61■■■□□ 2.33
CPNE1-223ENST00000475146 TNFAIP1Q13829 316 aa29.61■■■□□ 2.33
CPNE1-223ENST00000475146 PDE3AQ14432 1141 aa29.61■■■□□ 2.33
CPNE1-223ENST00000475146 C20orf194Q5TEA3 1177 aa29.61■■■□□ 2.33
CPNE1-223ENST00000475146 PRKG1Q13976 671 aa29.6■■■□□ 2.33
CPNE1-223ENST00000475146 TNNI3KQ59H18 835 aa29.6■■■□□ 2.33
CPNE1-223ENST00000475146 ZDHHC15Q96MV8 337 aa29.6■■■□□ 2.33
CPNE1-223ENST00000475146 WBP1LQ9NX94 342 aa29.6■■■□□ 2.33
CPNE1-223ENST00000475146 FPGT-TNNI3KV9GXZ4 949 aa29.6■■■□□ 2.33
CPNE1-223ENST00000475146 SALL1Q9NSC2 1324 aa29.6■■■□□ 2.33
CPNE1-223ENST00000475146 UBE2Q2LH0YL09 131 aa29.59■■■□□ 2.33
CPNE1-223ENST00000475146 ZBTB22O15209 634 aa29.59■■■□□ 2.33
CPNE1-223ENST00000475146 NOGQ13253 232 aa29.59■■■□□ 2.33
CPNE1-223ENST00000475146 RASA3Q14644 834 aa29.59■■■□□ 2.33
CPNE1-223ENST00000475146 ZGPATQ8N5A5 531 aaKnown RBP29.59■■■□□ 2.33
CPNE1-223ENST00000475146 CCDC102AQ96A19 550 aa29.59■■■□□ 2.33
CPNE1-223ENST00000475146 MRIQ9BWK5 157 aa29.59■■■□□ 2.33
CPNE1-223ENST00000475146 GPR108Q9NPR9 543 aa29.59■■■□□ 2.33
CPNE1-223ENST00000475146 ZBTB40Q9NUA8 1239 aa29.59■■■□□ 2.33
CPNE1-223ENST00000475146 FOXN1O15353 648 aa29.58■■■□□ 2.33
CPNE1-223ENST00000475146 HHIPL2Q6UWX4 724 aa29.58■■■□□ 2.33
CPNE1-223ENST00000475146 ARMC9Q7Z3E5 817 aa29.58■■■□□ 2.33
CPNE1-223ENST00000475146 PDS5AQ29RF7 1337 aaKnown RBP29.57■■■□□ 2.32
CPNE1-223ENST00000475146 TCP10L2B9ZVM9 353 aa29.57■■■□□ 2.32
CPNE1-223ENST00000475146 DIXDC1Q155Q3 683 aa29.57■■■□□ 2.32
CPNE1-223ENST00000475146 BEGAINQ9BUH8 593 aa29.57■■■□□ 2.32
CPNE1-223ENST00000475146 TMOD2Q9NZR1 351 aa29.57■■■□□ 2.32
CPNE1-223ENST00000475146 ABCF2Q9UG63 623 aa29.57■■■□□ 2.32
CPNE1-223ENST00000475146 EXOC6BQ9Y2D4 811 aa29.57■■■□□ 2.32
CPNE1-223ENST00000475146 FAM155AB1AL88 458 aaPredicted RBP29.56■■■□□ 2.32
CPNE1-223ENST00000475146 TNNI2P48788 182 aa29.56■■■□□ 2.32
CPNE1-223ENST00000475146 SUPT20HL1Q3ZLR7 823 aa29.56■■■□□ 2.32
CPNE1-223ENST00000475146 APOBEC3HQ6NTF7 200 aaKnown RBP29.56■■■□□ 2.32
CPNE1-223ENST00000475146 SLC10A3P09131 477 aa29.55■■■□□ 2.32
CPNE1-223ENST00000475146 CACNB3P54284 484 aa29.55■■■□□ 2.32
CPNE1-223ENST00000475146 RPAP2Q8IXW5 612 aaPredicted RBP29.55■■■□□ 2.32
CPNE1-223ENST00000475146 ANGEL1Q9UNK9 670 aaKnown RBP29.55■■■□□ 2.32
CPNE1-223ENST00000475146 HMMRO75330 724 aa29.54■■■□□ 2.32
CPNE1-223ENST00000475146 ARID4AP29374 1257 aaPredicted RBP29.54■■■□□ 2.32
CPNE1-223ENST00000475146 NBPF12Q5TAG4 269 aaPredicted RBP29.54■■■□□ 2.32
CPNE1-223ENST00000475146 DZIP1Q86YF9 867 aaKnown RBP29.54■■■□□ 2.32
CPNE1-223ENST00000475146 RASAL3Q86YV0 1011 aa29.54■■■□□ 2.32
CPNE1-223ENST00000475146 ERC1Q8IUD2 1116 aa29.54■■■□□ 2.32
CPNE1-223ENST00000475146 ZIC5Q96T25 663 aa29.54■■■□□ 2.32
CPNE1-223ENST00000475146 DBNDD2Q9BQY9 259 aa29.54■■■□□ 2.32
CPNE1-223ENST00000475146 HMG20BQ9P0W2 317 aa29.54■■■□□ 2.32
CPNE1-223ENST00000475146 FZD1Q9UP38 647 aa29.54■■■□□ 2.32
CPNE1-223ENST00000475146 DAGLAQ9Y4D2 1042 aa29.54■■■□□ 2.32
CPNE1-223ENST00000475146 SSC5DA1L4H1 1573 aa29.54■■■□□ 2.32
CPNE1-223ENST00000475146 UQCRFS1P1P0C7P4 283 aa29.53■■■□□ 2.32
CPNE1-223ENST00000475146 CTCFP49711 727 aaPredicted RBP29.53■■■□□ 2.32
CPNE1-223ENST00000475146 TTC39AQ5SRH9 613 aa29.53■■■□□ 2.32
CPNE1-223ENST00000475146 SPTY2D1Q68D10 685 aaPredicted RBP29.53■■■□□ 2.32
CPNE1-223ENST00000475146 SPATA5Q8NB90 893 aa29.53■■■□□ 2.32
CPNE1-223ENST00000475146 PPP1R12BO60237 982 aaPredicted RBP29.52■■■□□ 2.32
CPNE1-223ENST00000475146 HSP90AB4PQ58FF6 505 aa29.52■■■□□ 2.32
CPNE1-223ENST00000475146 CCDC158Q5M9N0 1113 aa29.52■■■□□ 2.32
CPNE1-223ENST00000475146 PI16Q6UXB8 463 aa29.52■■■□□ 2.32
CPNE1-223ENST00000475146 TMEM39BQ9GZU3 492 aa29.51■■■□□ 2.31
CPNE1-223ENST00000475146 MCAMP43121 646 aa29.5■■■□□ 2.31
CPNE1-223ENST00000475146 KIF23Q02241 960 aaPredicted RBP29.5■■■□□ 2.31
CPNE1-223ENST00000475146 ERICH6Q7L0X2 663 aa29.5■■■□□ 2.31
CPNE1-223ENST00000475146 PCNTO95613 3336 aa29.5■■■□□ 2.31
CPNE1-223ENST00000475146 SIRT2Q8IXJ6 389 aa29.49■■■□□ 2.31
CPNE1-223ENST00000475146 CCDC8Q9H0W5 538 aaPredicted RBP29.49■■■□□ 2.31
CPNE1-223ENST00000475146 DBNLQ9UJU6 430 aaKnown RBP29.49■■■□□ 2.31
CPNE1-223ENST00000475146 CDAN1Q8IWY9 1227 aa29.48■■■□□ 2.31
CPNE1-223ENST00000475146 SLF2Q8IX21 1173 aa29.48■■■□□ 2.31
CPNE1-223ENST00000475146 EAF2Q96CJ1 260 aaPredicted RBP29.48■■■□□ 2.31
CPNE1-223ENST00000475146 TEPSINQ96N21 525 aa29.48■■■□□ 2.31
CPNE1-223ENST00000475146 TLR7Q9NYK1 1049 aaKnown RBP29.48■■■□□ 2.31
CPNE1-223ENST00000475146 ZBTB4Q9P1Z0 1013 aaPredicted RBP29.48■■■□□ 2.31
CPNE1-223ENST00000475146 APBB1O00213 710 aa29.47■■■□□ 2.31
CPNE1-223ENST00000475146 LDLRAD1Q5T700 205 aa29.47■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms