RNA–Protein interactions for RNA: ENST00000474281.1

PGK1-202, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 1 (best)

Gene PGK1, Length 307 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-202ENST00000474281 TRIM67Q6ZTA4 783 aa5.9□□□□□ -1.46
PGK1-202ENST00000474281 DHX32Q7L7V1 743 aaKnown RBP5.9□□□□□ -1.46
PGK1-202ENST00000474281 JARID2Q92833 1246 aaPredicted RBP5.9□□□□□ -1.46
PGK1-202ENST00000474281 IRF2BPLQ9H1B7 796 aa5.9□□□□□ -1.46
PGK1-202ENST00000474281 TNKS2Q9H2K2 1166 aa5.9□□□□□ -1.46
PGK1-202ENST00000474281 EHMT1Q9H9B1 1298 aa5.9□□□□□ -1.46
PGK1-202ENST00000474281 BRMS1Q9HCU9 246 aa5.9□□□□□ -1.46
PGK1-202ENST00000474281 STRN4Q9NRL3 753 aa5.9□□□□□ -1.46
PGK1-202ENST00000474281 DDX56Q9NY93 547 aaKnown RBP5.9□□□□□ -1.46
PGK1-202ENST00000474281 MARK1Q9P0L2 795 aa5.9□□□□□ -1.46
PGK1-202ENST00000474281 LEMD3Q9Y2U8 911 aa5.9□□□□□ -1.46
PGK1-202ENST00000474281 SAMM50Q9Y512 469 aa5.9□□□□□ -1.46
PGK1-202ENST00000474281 MAPTP10636 758 aaKnown RBP5.89□□□□□ -1.47
PGK1-202ENST00000474281 NME2P22392 152 aa5.89□□□□□ -1.47
PGK1-202ENST00000474281 CLCQ05315 142 aa5.89□□□□□ -1.47
PGK1-202ENST00000474281 PPP2R3AQ06190 1150 aa5.89□□□□□ -1.47
PGK1-202ENST00000474281 SPEM2Q0P670 501 aa5.89□□□□□ -1.47
PGK1-202ENST00000474281 C2orf27AQ580R0 203 aa5.89□□□□□ -1.47
PGK1-202ENST00000474281 DIEXFQ68CQ4 756 aaKnown RBP5.89□□□□□ -1.47
PGK1-202ENST00000474281 LSRQ86X29 649 aaPredicted RBP5.89□□□□□ -1.47
PGK1-202ENST00000474281 ASAP3Q8TDY4 903 aa5.89□□□□□ -1.47
PGK1-202ENST00000474281 THAP3Q8WTV1 239 aaPredicted RBP5.89□□□□□ -1.47
PGK1-202ENST00000474281 STAG1Q8WVM7 1258 aa5.89□□□□□ -1.47
PGK1-202ENST00000474281 FEZ1Q99689 392 aa5.89□□□□□ -1.47
PGK1-202ENST00000474281 PBX4Q9BYU1 374 aa5.89□□□□□ -1.47
PGK1-202ENST00000474281 SENP3-EIF4A1A0A087X0R7 540 aa5.88□□□□□ -1.47
PGK1-202ENST00000474281 LOC102724428A0A0B4J2F2 783 aa5.88□□□□□ -1.47
PGK1-202ENST00000474281 DCDC2BA2VCK2 349 aa5.88□□□□□ -1.47
PGK1-202ENST00000474281 TRIM37O94972 964 aa5.88□□□□□ -1.47
PGK1-202ENST00000474281 ATE1O95260 518 aa5.88□□□□□ -1.47
PGK1-202ENST00000474281 GJB6O95452 261 aa5.88□□□□□ -1.47
PGK1-202ENST00000474281 ZNF157P51786 506 aaPredicted RBP5.88□□□□□ -1.47
PGK1-202ENST00000474281 SIK1P57059 783 aa5.88□□□□□ -1.47
PGK1-202ENST00000474281 SEPT6Q14141 434 aa5.88□□□□□ -1.47
PGK1-202ENST00000474281 LRRC14Q15048 493 aa5.88□□□□□ -1.47
PGK1-202ENST00000474281 MTERF2Q49AM1 385 aa5.88□□□□□ -1.47
PGK1-202ENST00000474281 TAF7LQ5H9L4 462 aa5.88□□□□□ -1.47
PGK1-202ENST00000474281 GK5Q6ZS86 529 aa5.88□□□□□ -1.47
PGK1-202ENST00000474281 C19orf47Q8N9M1 422 aaKnown RBP5.88□□□□□ -1.47
PGK1-202ENST00000474281 BHMTQ93088 406 aa5.88□□□□□ -1.47
PGK1-202ENST00000474281 SLC30A3Q99726 388 aa5.88□□□□□ -1.47
PGK1-202ENST00000474281 MUC3BQ9H195 1237 aa5.88□□□□□ -1.47
PGK1-202ENST00000474281 CLEC4MQ9H2X3 399 aaPredicted RBP5.88□□□□□ -1.47
PGK1-202ENST00000474281 NDFIP2Q9NV92 336 aa5.88□□□□□ -1.47
PGK1-202ENST00000474281 HCN2Q9UL51 889 aa5.88□□□□□ -1.47
PGK1-202ENST00000474281 PPME1Q9Y570 386 aa5.88□□□□□ -1.47
PGK1-202ENST00000474281 ARID4BQ4LE39 1312 aaPredicted RBP5.88□□□□□ -1.47
PGK1-202ENST00000474281 A0A0G2JS52 829 aa5.87□□□□□ -1.47
PGK1-202ENST00000474281 ZBTB42B2RXF5 422 aa5.87□□□□□ -1.47
PGK1-202ENST00000474281 BNIP3LO60238 219 aa5.87□□□□□ -1.47
PGK1-202ENST00000474281 VIL1P09327 827 aaKnown RBP5.87□□□□□ -1.47
PGK1-202ENST00000474281 TKFCQ3LXA3 575 aa5.87□□□□□ -1.47
PGK1-202ENST00000474281 LARP1BQ659C4 914 aaKnown RBP5.87□□□□□ -1.47
PGK1-202ENST00000474281 SCARA3Q6AZY7 606 aa5.87□□□□□ -1.47
PGK1-202ENST00000474281 SYNPOQ8N3V7 929 aa5.87□□□□□ -1.47
PGK1-202ENST00000474281 ZNF669Q96BR6 464 aaPredicted RBP5.87□□□□□ -1.47
PGK1-202ENST00000474281 NSUN5Q96P11 429 aaKnown RBP5.87□□□□□ -1.47
PGK1-202ENST00000474281 POP1Q99575 1024 aaKnown RBP5.87□□□□□ -1.47
PGK1-202ENST00000474281 RASSF4Q9H2L5 321 aa5.87□□□□□ -1.47
PGK1-202ENST00000474281 TYW1Q9NV66 732 aaKnown RBP5.87□□□□□ -1.47
PGK1-202ENST00000474281 DNMT3LQ9UJW3 386 aa5.87□□□□□ -1.47
PGK1-202ENST00000474281 KDM2BQ8NHM5 1336 aa5.87□□□□□ -1.47
PGK1-202ENST00000474281 BPNT1O95861 308 aa5.86□□□□□ -1.47
PGK1-202ENST00000474281 B3GALT4O96024 378 aa5.86□□□□□ -1.47
PGK1-202ENST00000474281 ARNTP27540 789 aa5.86□□□□□ -1.47
PGK1-202ENST00000474281 GPLD1P80108 840 aa5.86□□□□□ -1.47
PGK1-202ENST00000474281 TCEA2Q15560 299 aa5.86□□□□□ -1.47
PGK1-202ENST00000474281 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.86□□□□□ -1.476e-16■■■□□ 14.7
PGK1-202ENST00000474281 LLGL2Q6P1M3 1020 aa5.86□□□□□ -1.47
PGK1-202ENST00000474281 KRT26Q7Z3Y9 468 aa5.86□□□□□ -1.47
PGK1-202ENST00000474281 SPNS2Q8IVW8 549 aa5.86□□□□□ -1.47
PGK1-202ENST00000474281 ST13P5Q8NFI4 369 aaPredicted RBP5.86□□□□□ -1.47
PGK1-202ENST00000474281 STK35Q8TDR2 534 aa5.86□□□□□ -1.47
PGK1-202ENST00000474281 BSNDQ8WZ55 320 aa5.86□□□□□ -1.47
PGK1-202ENST00000474281 GAL3ST3Q96A11 431 aa5.86□□□□□ -1.47
PGK1-202ENST00000474281 CHPF2Q9P2E5 772 aa5.86□□□□□ -1.47
PGK1-202ENST00000474281 ZMYM5Q9UJ78 669 aa5.86□□□□□ -1.47
PGK1-202ENST00000474281 SUGT1Q9Y2Z0 365 aa5.86□□□□□ -1.47
PGK1-202ENST00000474281 A0A1W2PQH9 124 aa5.85□□□□□ -1.47
PGK1-202ENST00000474281 J3QW42 95 aa5.85□□□□□ -1.47
PGK1-202ENST00000474281 DIAPH1O60610 1272 aaKnown RBP5.85□□□□□ -1.47
PGK1-202ENST00000474281 DDAH1O94760 285 aa5.85□□□□□ -1.47
PGK1-202ENST00000474281 PDGFRBP09619 1106 aa5.85□□□□□ -1.47
PGK1-202ENST00000474281 ATP11AP98196 1134 aa5.85□□□□□ -1.47
PGK1-202ENST00000474281 RPL6Q02878 288 aaKnown RBP5.85□□□□□ -1.47
PGK1-202ENST00000474281 PCDH1Q08174 1060 aa5.85□□□□□ -1.47
PGK1-202ENST00000474281 ZNF252P-AS1Q0IIN9 211 aa5.85□□□□□ -1.47
PGK1-202ENST00000474281 PPP2R5EQ16537 467 aa5.85□□□□□ -1.47
PGK1-202ENST00000474281 ZNF423Q2M1K9 1284 aa5.85□□□□□ -1.47
PGK1-202ENST00000474281 TRIM46Q7Z4K8 759 aa5.85□□□□□ -1.47
PGK1-202ENST00000474281 GRIN3AQ8TCU5 1115 aa5.85□□□□□ -1.47
PGK1-202ENST00000474281 EMILIN2Q9BXX0 1053 aa5.85□□□□□ -1.47
PGK1-202ENST00000474281 NUCKS1Q9H1E3 243 aaKnown RBP5.85□□□□□ -1.47
PGK1-202ENST00000474281 POLR3KQ9Y2Y1 108 aaPredicted RBP5.85□□□□□ -1.47
PGK1-202ENST00000474281 PCDHB14Q9Y5E9 798 aa5.85□□□□□ -1.47
PGK1-202ENST00000474281 H7C1W4 665 aa5.84□□□□□ -1.47
PGK1-202ENST00000474281 SMNDC1O75940 238 aaKnown RBP eCLIP5.84□□□□□ -1.471e-51■■■□□ 17.7
PGK1-202ENST00000474281 AVPP01185 164 aa5.84□□□□□ -1.47
PGK1-202ENST00000474281 GHRHP01286 108 aa5.84□□□□□ -1.47
PGK1-202ENST00000474281 S100BP04271 92 aaPredicted RBP5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms