RNA–Protein interactions for RNA: ENST00000474273.5

SSB-210, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-210ENST00000474273 FAM170BA6NMN3 283 aa8.54□□□□□ -1.04
SSB-210ENST00000474273 PHACTR2O75167 634 aa8.54□□□□□ -1.04
SSB-210ENST00000474273 EIF1AXP47813 144 aaKnown RBP8.54□□□□□ -1.04
SSB-210ENST00000474273 GSTM4Q03013 218 aa8.54□□□□□ -1.04
SSB-210ENST00000474273 NRSN2Q9GZP1 204 aa8.54□□□□□ -1.04
SSB-210ENST00000474273 PAK6Q9NQU5 681 aaPredicted RBP8.54□□□□□ -1.04
SSB-210ENST00000474273 TNFRSF21O75509 655 aa8.53□□□□□ -1.04
SSB-210ENST00000474273 ADH5P11766 374 aa8.53□□□□□ -1.04
SSB-210ENST00000474273 MPSTP25325 297 aa8.53□□□□□ -1.04
SSB-210ENST00000474273 SNX29Q8TEQ0 813 aa8.53□□□□□ -1.04
SSB-210ENST00000474273 ERICH6Q7L0X2 663 aa8.52□□□□□ -1.05
SSB-210ENST00000474273 POLIQ9UNA4 740 aa8.52□□□□□ -1.05
SSB-210ENST00000474273 CYP27A1Q02318 531 aa8.51□□□□□ -1.05
SSB-210ENST00000474273 PEAR1Q5VY43 1037 aaPredicted RBP8.51□□□□□ -1.05
SSB-210ENST00000474273 DUSP27Q5VZP5 1158 aa8.51□□□□□ -1.05
SSB-210ENST00000474273 ALKBH2Q6NS38 261 aa8.51□□□□□ -1.05
SSB-210ENST00000474273 PBXIP1Q96AQ6 731 aa8.51□□□□□ -1.05
SSB-210ENST00000474273 ZC3H7BQ9UGR2 993 aaKnown RBP8.51□□□□□ -1.05
SSB-210ENST00000474273 ACTL7BQ9Y614 415 aa8.51□□□□□ -1.05
SSB-210ENST00000474273 MAP7Q14244 749 aa8.5□□□□□ -1.05
SSB-210ENST00000474273 NFICP08651 508 aa8.49□□□□□ -1.05
SSB-210ENST00000474273 EHHADHQ08426 723 aa8.49□□□□□ -1.05
SSB-210ENST00000474273 CCDC82Q8N4S0 544 aa8.49□□□□□ -1.05
SSB-210ENST00000474273 LATS2Q9NRM7 1088 aa8.49□□□□□ -1.05
SSB-210ENST00000474273 FOXD3Q9UJU5 478 aaPredicted RBP8.49□□□□□ -1.05
SSB-210ENST00000474273 AMOTL2Q9Y2J4 779 aa8.49□□□□□ -1.05
SSB-210ENST00000474273 PAPLNO95428 1278 aa8.48□□□□□ -1.05
SSB-210ENST00000474273 HP1BP3Q5SSJ5 553 aaPredicted RBP8.48□□□□□ -1.05
SSB-210ENST00000474273 ZNF765Q7L2R6 523 aa8.48□□□□□ -1.05
SSB-210ENST00000474273 KRTAP4-9Q9BYQ8 210 aa8.48□□□□□ -1.05
SSB-210ENST00000474273 SEMA6CQ9H3T2 930 aa8.48□□□□□ -1.05
SSB-210ENST00000474273 LRRC4CQ9HCJ2 640 aa8.48□□□□□ -1.05
SSB-210ENST00000474273 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.47□□□□□ -1.05
SSB-210ENST00000474273 METTL12A8MUP2 240 aa8.47□□□□□ -1.05
SSB-210ENST00000474273 RAB6AP20340 208 aa8.47□□□□□ -1.05
SSB-210ENST00000474273 MAOBP27338 520 aa8.47□□□□□ -1.05
SSB-210ENST00000474273 GTF3C2Q8WUA4 911 aaPredicted RBP8.47□□□□□ -1.05
SSB-210ENST00000474273 ACSS3Q9H6R3 686 aa8.47□□□□□ -1.05
SSB-210ENST00000474273 CYP11A1P05108 521 aa8.46□□□□□ -1.06
SSB-210ENST00000474273 CTSBP07858 339 aa8.46□□□□□ -1.06
SSB-210ENST00000474273 USP5P45974 858 aa8.46□□□□□ -1.06
SSB-210ENST00000474273 PCDH1Q08174 1060 aa8.46□□□□□ -1.06
SSB-210ENST00000474273 BCL7CQ8WUZ0 217 aaPredicted RBP8.46□□□□□ -1.06
SSB-210ENST00000474273 CLEC4MQ9H2X3 399 aaPredicted RBP8.46□□□□□ -1.06
SSB-210ENST00000474273 C1orf115Q9H7X2 142 aa8.46□□□□□ -1.06
SSB-210ENST00000474273 SLC5A6Q9Y289 635 aa8.46□□□□□ -1.06
SSB-210ENST00000474273 NPR3P17342 541 aa8.45□□□□□ -1.06
SSB-210ENST00000474273 ZNF423Q2M1K9 1284 aa8.45□□□□□ -1.06
SSB-210ENST00000474273 SEZ6L2Q6UXD5 910 aa8.45□□□□□ -1.06
SSB-210ENST00000474273 DYMQ7RTS9 669 aa8.45□□□□□ -1.06
SSB-210ENST00000474273 GSX1Q9H4S2 264 aaPredicted RBP8.45□□□□□ -1.06
SSB-210ENST00000474273 ZFYVE1Q9HBF4 777 aa8.45□□□□□ -1.06
SSB-210ENST00000474273 FAM105AQ9NUU6 356 aa8.45□□□□□ -1.06
SSB-210ENST00000474273 A0A096LPE4 126 aa8.44□□□□□ -1.06
SSB-210ENST00000474273 A0A1W2PPZ6 126 aa8.44□□□□□ -1.06
SSB-210ENST00000474273 POU4F3Q15319 338 aa8.44□□□□□ -1.06
SSB-210ENST00000474273 AKAP4Q5JQC9 854 aa8.44□□□□□ -1.06
SSB-210ENST00000474273 WFDC3Q8IUB2 231 aa8.44□□□□□ -1.06
SSB-210ENST00000474273 STK11IPQ8N1F8 1099 aa8.44□□□□□ -1.06
SSB-210ENST00000474273 ZFYVE28Q9HCC9 887 aa8.44□□□□□ -1.06
SSB-210ENST00000474273 C1GALT1Q9NS00 363 aa8.44□□□□□ -1.06
SSB-210ENST00000474273 BIN1O00499 593 aa8.43□□□□□ -1.06
SSB-210ENST00000474273 MTMR3Q13615 1198 aa8.43□□□□□ -1.06
SSB-210ENST00000474273 AAMPQ13685 434 aa8.43□□□□□ -1.06
SSB-210ENST00000474273 PLCL1Q15111 1095 aa8.43□□□□□ -1.06
SSB-210ENST00000474273 CCNJLQ8IV13 435 aa8.43□□□□□ -1.06
SSB-210ENST00000474273 RAD18Q9NS91 495 aa8.43□□□□□ -1.06
SSB-210ENST00000474273 AP4E1Q9UPM8 1137 aa8.43□□□□□ -1.06
SSB-210ENST00000474273 PPP1R15AO75807 674 aaPredicted RBP8.42□□□□□ -1.06
SSB-210ENST00000474273 ASPAP45381 313 aa8.42□□□□□ -1.06
SSB-210ENST00000474273 ZNF792Q3KQV3 632 aa8.42□□□□□ -1.06
SSB-210ENST00000474273 OGFOD3Q6PK18 319 aa8.42□□□□□ -1.06
SSB-210ENST00000474273 ZNF574Q6ZN55 896 aaPredicted RBP8.42□□□□□ -1.06
SSB-210ENST00000474273 FAM13AO94988 1023 aa8.41□□□□□ -1.06
SSB-210ENST00000474273 GRIA4P48058 902 aa8.41□□□□□ -1.06
SSB-210ENST00000474273 ZNF648Q5T619 568 aaPredicted RBP8.41□□□□□ -1.06
SSB-210ENST00000474273 GJD3Q8N144 294 aa8.41□□□□□ -1.06
SSB-210ENST00000474273 MISP3Q96FF7 219 aa8.41□□□□□ -1.06
SSB-210ENST00000474273 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.41□□□□□ -1.06
SSB-210ENST00000474273 CARMIL2Q6F5E8 1435 aa8.4□□□□□ -1.06
SSB-210ENST00000474273 A0A1W2PP55 124 aa8.4□□□□□ -1.06
SSB-210ENST00000474273 DYNC1LI2O43237 492 aaPredicted RBP8.4□□□□□ -1.06
SSB-210ENST00000474273 FZD6O60353 706 aa8.4□□□□□ -1.06
SSB-210ENST00000474273 POLR3DP05423 398 aaPredicted RBP8.4□□□□□ -1.06
SSB-210ENST00000474273 SPRED3Q2MJR0 410 aa8.4□□□□□ -1.06
SSB-210ENST00000474273 SPRED2Q7Z698 418 aa8.4□□□□□ -1.06
SSB-210ENST00000474273 TCF12Q99081 682 aa8.4□□□□□ -1.06
SSB-210ENST00000474273 CORO1BQ9BR76 489 aa8.4□□□□□ -1.06
SSB-210ENST00000474273 TRIM56Q9BRZ2 755 aaKnown RBP8.4□□□□□ -1.06
SSB-210ENST00000474273 DAGLAQ9Y4D2 1042 aa8.4□□□□□ -1.06
SSB-210ENST00000474273 SSFA2P28290 1259 aa8.39□□□□□ -1.07
SSB-210ENST00000474273 GALNT12Q8IXK2 581 aa8.39□□□□□ -1.07
SSB-210ENST00000474273 DDX54Q8TDD1 881 aaKnown RBP8.39□□□□□ -1.07
SSB-210ENST00000474273 LIN7BQ9HAP6 207 aa8.39□□□□□ -1.07
SSB-210ENST00000474273 ECEL1O95672 775 aa8.38□□□□□ -1.07
SSB-210ENST00000474273 B3GALT4O96024 378 aa8.38□□□□□ -1.07
SSB-210ENST00000474273 CYP27C1Q4G0S4 372 aa8.38□□□□□ -1.07
SSB-210ENST00000474273 SYNGAP1Q96PV0 1343 aa8.37□□□□□ -1.07
SSB-210ENST00000474273 DBX1A6NMT0 343 aa8.37□□□□□ -1.07
SSB-210ENST00000474273 SUPT5HO00267 1087 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms