RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 CAND2O75155 1236 aa7.24□□□□□ -1.25
SMARCE1-208ENST00000474246 LMNB1P20700 586 aa7.24□□□□□ -1.25
SMARCE1-208ENST00000474246 PTPREP23469 700 aa7.24□□□□□ -1.25
SMARCE1-208ENST00000474246 SEPT2Q15019 361 aa7.24□□□□□ -1.25
SMARCE1-208ENST00000474246 GIGYF2Q6Y7W6 1299 aaKnown RBP7.24□□□□□ -1.25
SMARCE1-208ENST00000474246 CCDC34Q96HJ3 373 aa7.24□□□□□ -1.25
SMARCE1-208ENST00000474246 MAP7D2Q96T17 732 aa7.24□□□□□ -1.25
SMARCE1-208ENST00000474246 FAM198AQ9UFP1 575 aa7.24□□□□□ -1.25
SMARCE1-208ENST00000474246 U2AF1L5P0DN76 240 aaPredicted RBP7.24□□□□□ -1.25
SMARCE1-208ENST00000474246 ABCD1P33897 745 aa7.24□□□□□ -1.25
SMARCE1-208ENST00000474246 ZNF131P52739 623 aa7.24□□□□□ -1.25
SMARCE1-208ENST00000474246 U2AF1Q01081 240 aaKnown RBP eCLIP7.24□□□□□ -1.25
SMARCE1-208ENST00000474246 TAF11Q15544 211 aa7.24□□□□□ -1.25
SMARCE1-208ENST00000474246 TMEM95Q3KNT9 176 aa7.24□□□□□ -1.25
SMARCE1-208ENST00000474246 PDXDC1Q6P996 788 aa7.24□□□□□ -1.25
SMARCE1-208ENST00000474246 METTL3Q86U44 580 aaKnown RBP7.24□□□□□ -1.25
SMARCE1-208ENST00000474246 IQCF2Q8IXL9 164 aa7.24□□□□□ -1.25
SMARCE1-208ENST00000474246 CCDC24Q8N4L8 307 aa7.24□□□□□ -1.25
SMARCE1-208ENST00000474246 ATRIPQ8WXE1 791 aa7.24□□□□□ -1.25
SMARCE1-208ENST00000474246 SMARCC1Q92922 1105 aaPredicted RBP7.24□□□□□ -1.25
SMARCE1-208ENST00000474246 KCNK17Q96T54 332 aa7.24□□□□□ -1.25
SMARCE1-208ENST00000474246 CAPN10Q9HC96 672 aa7.24□□□□□ -1.25
SMARCE1-208ENST00000474246 UTP6Q9NYH9 597 aaKnown RBP7.24□□□□□ -1.25
SMARCE1-208ENST00000474246 CLIC5Q9NZA1 410 aa7.24□□□□□ -1.25
SMARCE1-208ENST00000474246 ADGRG1Q9Y653 693 aa7.24□□□□□ -1.25
SMARCE1-208ENST00000474246 ERICH4A6NGS2 130 aa7.23□□□□□ -1.25
SMARCE1-208ENST00000474246 A6NJY4 79 aa7.23□□□□□ -1.25
SMARCE1-208ENST00000474246 TRIM6-TRIM34B2RNG4 842 aa7.23□□□□□ -1.25
SMARCE1-208ENST00000474246 ST18O60284 1047 aa7.23□□□□□ -1.25
SMARCE1-208ENST00000474246 RPN1P04843 607 aaKnown RBP7.23□□□□□ -1.25
SMARCE1-208ENST00000474246 CCDC175P0C221 793 aa7.23□□□□□ -1.25
SMARCE1-208ENST00000474246 ECE1P42892 770 aa7.23□□□□□ -1.25
SMARCE1-208ENST00000474246 CCT2P78371 535 aaKnown RBP7.23□□□□□ -1.25
SMARCE1-208ENST00000474246 DUSP27Q5VZP5 1158 aa7.23□□□□□ -1.25
SMARCE1-208ENST00000474246 ARHGAP27Q6ZUM4 889 aa7.23□□□□□ -1.25
SMARCE1-208ENST00000474246 SUGP1Q8IWZ8 645 aaKnown RBP7.23□□□□□ -1.25
SMARCE1-208ENST00000474246 ADAMTS19Q8TE59 1207 aa7.23□□□□□ -1.25
SMARCE1-208ENST00000474246 MARVELD3Q96A59 401 aa7.23□□□□□ -1.25
SMARCE1-208ENST00000474246 RABGAP1Q9Y3P9 1069 aa7.23□□□□□ -1.25
SMARCE1-208ENST00000474246 HFM1A2PYH4 1435 aa7.23□□□□□ -1.25
SMARCE1-208ENST00000474246 PIK3CAP42336 1068 aa7.22□□□□□ -1.25
SMARCE1-208ENST00000474246 MAP3K11Q16584 847 aa7.22□□□□□ -1.25
SMARCE1-208ENST00000474246 MFSD4BQ5TF39 518 aa7.22□□□□□ -1.25
SMARCE1-208ENST00000474246 PHLDB3Q6NSJ2 640 aa7.22□□□□□ -1.25
SMARCE1-208ENST00000474246 PPP1R18Q6NYC8 613 aa7.22□□□□□ -1.25
SMARCE1-208ENST00000474246 NYAP1Q6ZVC0 841 aa7.22□□□□□ -1.25
SMARCE1-208ENST00000474246 WDR75Q8IWA0 830 aaKnown RBP7.22□□□□□ -1.25
SMARCE1-208ENST00000474246 TTC13Q8NBP0 860 aa7.22□□□□□ -1.25
SMARCE1-208ENST00000474246 TSR2Q969E8 191 aaKnown RBP7.22□□□□□ -1.25
SMARCE1-208ENST00000474246 IWS1Q96ST2 819 aa7.22□□□□□ -1.25
SMARCE1-208ENST00000474246 CGNQ9P2M7 1197 aaKnown RBP7.22□□□□□ -1.25
SMARCE1-208ENST00000474246 ZNF69Q9UC07 566 aa7.22□□□□□ -1.25
SMARCE1-208ENST00000474246 HDAC9Q9UKV0 1011 aa7.22□□□□□ -1.25
SMARCE1-208ENST00000474246 MAFFQ9ULX9 164 aa7.22□□□□□ -1.25
SMARCE1-208ENST00000474246 RBM19Q9Y4C8 960 aaKnown RBP7.22□□□□□ -1.25
SMARCE1-208ENST00000474246 ENPP3O14638 875 aa7.22□□□□□ -1.25
SMARCE1-208ENST00000474246 KRT18P05783 430 aaKnown RBP7.22□□□□□ -1.25
SMARCE1-208ENST00000474246 LMOD1P29536 600 aaPredicted RBP7.22□□□□□ -1.25
SMARCE1-208ENST00000474246 VARS2Q5ST30 1063 aaKnown RBP7.22□□□□□ -1.25
SMARCE1-208ENST00000474246 ALYREFQ86V81 257 aaKnown RBP7.22□□□□□ -1.25
SMARCE1-208ENST00000474246 GMLQ99445 158 aa7.22□□□□□ -1.25
SMARCE1-208ENST00000474246 CD248Q9HCU0 757 aa7.22□□□□□ -1.25
SMARCE1-208ENST00000474246 TSKSQ9UJT2 592 aa7.22□□□□□ -1.25
SMARCE1-208ENST00000474246 PRKAB1Q9Y478 270 aa7.22□□□□□ -1.25
SMARCE1-208ENST00000474246 ARHGAP31Q2M1Z3 1444 aa7.22□□□□□ -1.25
SMARCE1-208ENST00000474246 SSH2Q76I76 1423 aa7.22□□□□□ -1.25
SMARCE1-208ENST00000474246 A0A1W2PRQ8 180 aa7.21□□□□□ -1.25
SMARCE1-208ENST00000474246 PPP1R3GB7ZBB8 358 aa7.21□□□□□ -1.25
SMARCE1-208ENST00000474246 TPPPO94811 219 aa7.21□□□□□ -1.25
SMARCE1-208ENST00000474246 OATP04181 439 aa7.21□□□□□ -1.25
SMARCE1-208ENST00000474246 CCDC172P0C7W6 258 aa7.21□□□□□ -1.25
SMARCE1-208ENST00000474246 TMED1Q13445 227 aa7.21□□□□□ -1.25
SMARCE1-208ENST00000474246 PROX2Q3B8N5 592 aa7.21□□□□□ -1.25
SMARCE1-208ENST00000474246 KRT28Q7Z3Y7 464 aa7.21□□□□□ -1.25
SMARCE1-208ENST00000474246 FERMT3Q86UX7 667 aa7.21□□□□□ -1.25
SMARCE1-208ENST00000474246 ARHGEF25Q86VW2 580 aa7.21□□□□□ -1.25
SMARCE1-208ENST00000474246 PXYLP1Q8TE99 480 aa7.21□□□□□ -1.25
SMARCE1-208ENST00000474246 CHST12Q9NRB3 414 aa7.21□□□□□ -1.25
SMARCE1-208ENST00000474246 KLHL33A6NCF5 533 aa7.21□□□□□ -1.26
SMARCE1-208ENST00000474246 C3orf80F5H4A9 247 aa7.21□□□□□ -1.26
SMARCE1-208ENST00000474246 CHL1O00533 1208 aa7.21□□□□□ -1.26
SMARCE1-208ENST00000474246 HNRNPCP07910 306 aaKnown RBP eCLIP7.21□□□□□ -1.26
SMARCE1-208ENST00000474246 CCDC159P0C7I6 412 aa7.21□□□□□ -1.26
SMARCE1-208ENST00000474246 ZNF853P0CG23 659 aa7.21□□□□□ -1.26
SMARCE1-208ENST00000474246 RPL17P18621 184 aaKnown RBP7.21□□□□□ -1.26
SMARCE1-208ENST00000474246 PSEN2P49810 448 aa7.21□□□□□ -1.26
SMARCE1-208ENST00000474246 C10orf62Q5T681 223 aaPredicted RBP7.21□□□□□ -1.26
SMARCE1-208ENST00000474246 PPP4R4Q6NUP7 873 aa7.21□□□□□ -1.26
SMARCE1-208ENST00000474246 MYO1HQ8N1T3 1032 aa7.21□□□□□ -1.26
SMARCE1-208ENST00000474246 MPP4Q96JB8 637 aa7.21□□□□□ -1.26
SMARCE1-208ENST00000474246 NUCKS1Q9H1E3 243 aaKnown RBP7.21□□□□□ -1.26
SMARCE1-208ENST00000474246 CHCHD3Q9NX63 227 aaKnown RBP7.21□□□□□ -1.26
SMARCE1-208ENST00000474246 BIN2Q9UBW5 565 aaPredicted RBP7.21□□□□□ -1.26
SMARCE1-208ENST00000474246 IP6K2Q9UHH9 426 aa7.21□□□□□ -1.26
SMARCE1-208ENST00000474246 HCN4Q9Y3Q4 1203 aa7.21□□□□□ -1.26
SMARCE1-208ENST00000474246 IKBKGQ9Y6K9 419 aa7.21□□□□□ -1.26
SMARCE1-208ENST00000474246 PALM3A6NDB9 673 aaPredicted RBP7.2□□□□□ -1.26
SMARCE1-208ENST00000474246 FOXO3O43524 673 aa7.2□□□□□ -1.26
SMARCE1-208ENST00000474246 HTATSF1O43719 755 aaKnown RBP7.2□□□□□ -1.26
SMARCE1-208ENST00000474246 BPNT1O95861 308 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms