RNA–Protein interactions for RNA: ENST00000473270.1

APTX-218, Transcript of aprataxin, humanhuman

TSL 2

Gene APTX, Length 645 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-218ENST00000473270 USP2O75604 605 aaPredicted RBP24.42■■□□□ 1.5
APTX-218ENST00000473270 CRKP46108 304 aa24.42■■□□□ 1.5
APTX-218ENST00000473270 HOOK2Q96ED9 719 aa24.42■■□□□ 1.5
APTX-218ENST00000473270 BICC1Q9H694 974 aaKnown RBP24.42■■□□□ 1.5
APTX-218ENST00000473270 ECM29Q5VYK3 1845 aa24.42■■□□□ 1.5
APTX-218ENST00000473270 NBPF7P0C2Y1 421 aaPredicted RBP24.41■■□□□ 1.5
APTX-218ENST00000473270 PRPF38BQ5VTL8 546 aaKnown RBP24.41■■□□□ 1.5
APTX-218ENST00000473270 INTS3Q68E01 1043 aaKnown RBP24.41■■□□□ 1.5
APTX-218ENST00000473270 PUS3Q9BZE2 481 aaKnown RBP24.41■■□□□ 1.5
APTX-218ENST00000473270 ELP3Q9H9T3 547 aa24.41■■□□□ 1.5
APTX-218ENST00000473270 PTPRCP08575 1304 aa24.4■■□□□ 1.5
APTX-218ENST00000473270 TEKT1Q969V4 418 aa24.4■■□□□ 1.5
APTX-218ENST00000473270 OPTNQ96CV9 577 aa24.4■■□□□ 1.5
APTX-218ENST00000473270 R3HDMLQ9H3Y0 253 aa24.4■■□□□ 1.5
APTX-218ENST00000473270 SMC4Q9NTJ3 1288 aa24.4■■□□□ 1.5
APTX-218ENST00000473270 RIPOR2Q9Y4F9 1068 aa24.4■■□□□ 1.5
APTX-218ENST00000473270 MAST3O60307 1309 aa24.39■■□□□ 1.5
APTX-218ENST00000473270 IGF2BP3O00425 579 aaKnown RBP eCLIP24.39■■□□□ 1.49
APTX-218ENST00000473270 IFIT1P09914 478 aaKnown RBP24.39■■□□□ 1.49
APTX-218ENST00000473270 SSH1Q8WYL5 1049 aa24.39■■□□□ 1.49
APTX-218ENST00000473270 IQSEC3Q9UPP2 1182 aaPredicted RBP24.39■■□□□ 1.49
APTX-218ENST00000473270 TNRC18O15417 2968 aaPredicted RBP24.39■■□□□ 1.49
APTX-218ENST00000473270 SSC5DA1L4H1 1573 aa24.38■■□□□ 1.49
APTX-218ENST00000473270 RARSP54136 660 aaKnown RBP24.38■■□□□ 1.49
APTX-218ENST00000473270 HDLBPQ00341 1268 aaKnown RBP24.38■■□□□ 1.49
APTX-218ENST00000473270 OTOP1Q7RTM1 612 aa24.38■■□□□ 1.49
APTX-218ENST00000473270 UTYO14607 1347 aa24.37■■□□□ 1.49
APTX-218ENST00000473270 A0A1B0GUL6 1792 aa24.37■■□□□ 1.49
APTX-218ENST00000473270 PDE8BO95263 885 aa24.37■■□□□ 1.49
APTX-218ENST00000473270 GTF2A2P52657 109 aa24.37■■□□□ 1.49
APTX-218ENST00000473270 MAP3K9P80192 1104 aa24.37■■□□□ 1.49
APTX-218ENST00000473270 SP3Q02447 781 aa24.37■■□□□ 1.49
APTX-218ENST00000473270 CRHR2Q13324 411 aa24.37■■□□□ 1.49
APTX-218ENST00000473270 MRPL50Q8N5N7 158 aaKnown RBP24.37■■□□□ 1.49
APTX-218ENST00000473270 EFCC1Q9HA90 598 aa24.37■■□□□ 1.49
APTX-218ENST00000473270 FBXO33Q7Z6M2 555 aa24.36■■□□□ 1.49
APTX-218ENST00000473270 TMEM39BQ9GZU3 492 aa24.36■■□□□ 1.49
APTX-218ENST00000473270 ZFYVE28Q9HCC9 887 aa24.36■■□□□ 1.49
APTX-218ENST00000473270 PDE4DIPQ5VU43 2346 aa24.35■■□□□ 1.49
APTX-218ENST00000473270 PUM3Q15397 648 aaKnown RBP24.35■■□□□ 1.49
APTX-218ENST00000473270 RABL6Q3YEC7 729 aaPredicted RBP24.35■■□□□ 1.49
APTX-218ENST00000473270 LRRC24Q50LG9 513 aa24.35■■□□□ 1.49
APTX-218ENST00000473270 CD99L2Q8TCZ2 262 aa24.35■■□□□ 1.49
APTX-218ENST00000473270 KAZALD1Q96I82 304 aa24.34■■□□□ 1.49
APTX-218ENST00000473270 SUGT1Q9Y2Z0 365 aa24.34■■□□□ 1.49
APTX-218ENST00000473270 AOX1Q06278 1338 aa24.34■■□□□ 1.49
APTX-218ENST00000473270 CCL15-CCL14A0A0B4J2E2 113 aa24.33■■□□□ 1.49
APTX-218ENST00000473270 TESPA1A2RU30 521 aaPredicted RBP24.33■■□□□ 1.49
APTX-218ENST00000473270 SLC5A1P13866 664 aa24.33■■□□□ 1.49
APTX-218ENST00000473270 TAF1CQ15572 869 aaPredicted RBP24.33■■□□□ 1.49
APTX-218ENST00000473270 CCL15Q16663 113 aa24.33■■□□□ 1.49
APTX-218ENST00000473270 GJA5P36382 358 aa24.32■■□□□ 1.48
APTX-218ENST00000473270 BCAMP50895 628 aa24.32■■□□□ 1.48
APTX-218ENST00000473270 VGLL4Q14135 290 aa24.32■■□□□ 1.48
APTX-218ENST00000473270 KIF22Q14807 665 aa24.32■■□□□ 1.48
APTX-218ENST00000473270 DCAF15Q66K64 600 aa24.32■■□□□ 1.48
APTX-218ENST00000473270 OTUD5Q96G74 571 aa24.32■■□□□ 1.48
APTX-218ENST00000473270 MRIQ9BWK5 157 aa24.32■■□□□ 1.48
APTX-218ENST00000473270 RCAN3Q9UKA8 241 aa24.32■■□□□ 1.48
APTX-218ENST00000473270 HDAC5Q9UQL6 1122 aa24.32■■□□□ 1.48
APTX-218ENST00000473270 PTPN22Q9Y2R2 807 aa24.32■■□□□ 1.48
APTX-218ENST00000473270 KIF16BQ96L93 1317 aa24.32■■□□□ 1.48
APTX-218ENST00000473270 NBPF11Q86T75 865 aa24.31■■□□□ 1.48
APTX-218ENST00000473270 ZDHHC15Q96MV8 337 aa24.31■■□□□ 1.48
APTX-218ENST00000473270 TEPSINQ96N21 525 aa24.31■■□□□ 1.48
APTX-218ENST00000473270 TMEM106CQ9BVX2 250 aa24.31■■□□□ 1.48
APTX-218ENST00000473270 PCDH10Q9P2E7 1040 aa24.31■■□□□ 1.48
APTX-218ENST00000473270 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.3■■□□□ 1.48
APTX-218ENST00000473270 ANKRD44Q8N8A2 993 aa24.3■■□□□ 1.48
APTX-218ENST00000473270 WDR66Q8TBY9 1149 aa24.3■■□□□ 1.48
APTX-218ENST00000473270 GCC1Q96CN9 775 aa24.3■■□□□ 1.48
APTX-218ENST00000473270 GNL3LQ9NVN8 582 aaKnown RBP24.3■■□□□ 1.48
APTX-218ENST00000473270 IPO8O15397 1037 aaKnown RBP24.29■■□□□ 1.48
APTX-218ENST00000473270 CETPP11597 493 aa24.29■■□□□ 1.48
APTX-218ENST00000473270 FKBP1CQ5VVH2 108 aa24.29■■□□□ 1.48
APTX-218ENST00000473270 FAM83AQ86UY5 434 aa24.29■■□□□ 1.48
APTX-218ENST00000473270 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.29■■□□□ 1.48
APTX-218ENST00000473270 WRNIP1Q96S55 665 aa24.29■■□□□ 1.48
APTX-218ENST00000473270 PTPN18Q99952 460 aa24.29■■□□□ 1.48
APTX-218ENST00000473270 BCAR3O75815 825 aa24.28■■□□□ 1.48
APTX-218ENST00000473270 CACNB3P54284 484 aa24.28■■□□□ 1.48
APTX-218ENST00000473270 ERO1BQ86YB8 467 aa24.28■■□□□ 1.48
APTX-218ENST00000473270 KLHDC4Q8TBB5 520 aa24.28■■□□□ 1.48
APTX-218ENST00000473270 LPIN2Q92539 896 aa24.28■■□□□ 1.48
APTX-218ENST00000473270 MS4A4AQ96JQ5 239 aa24.28■■□□□ 1.48
APTX-218ENST00000473270 ARAP2Q8WZ64 1704 aa24.27■■□□□ 1.48
APTX-218ENST00000473270 SNAPC2Q13487 334 aa24.27■■□□□ 1.48
APTX-218ENST00000473270 HHIPL2Q6UWX4 724 aa24.27■■□□□ 1.48
APTX-218ENST00000473270 VGLL2Q8N8G2 317 aa24.27■■□□□ 1.48
APTX-218ENST00000473270 USP44Q9H0E7 712 aa24.27■■□□□ 1.48
APTX-218ENST00000473270 NOB1Q9ULX3 412 aaKnown RBP24.27■■□□□ 1.48
APTX-218ENST00000473270 EYA2O00167 538 aa24.26■■□□□ 1.47
APTX-218ENST00000473270 UBTFL1P0CB47 393 aaPredicted RBP24.26■■□□□ 1.47
APTX-218ENST00000473270 SLC9C1Q4G0N8 1177 aa24.26■■□□□ 1.47
APTX-218ENST00000473270 BRI3BPQ8WY22 251 aa24.26■■□□□ 1.47
APTX-218ENST00000473270 API5Q9BZZ5 524 aaKnown RBP24.26■■□□□ 1.47
APTX-218ENST00000473270 SPDYE5A6NIY4 337 aa24.25■■□□□ 1.47
APTX-218ENST00000473270 GRIK5Q16478 980 aa24.25■■□□□ 1.47
APTX-218ENST00000473270 CDAN1Q8IWY9 1227 aa24.25■■□□□ 1.47
APTX-218ENST00000473270 CNKSR2Q8WXI2 1034 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms