RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 MYPNQ86TC9 1320 aa8.8□□□□□ -1
HDAC1-204ENST00000471488 OTOFQ9HC10 1997 aa8.79□□□□□ -1
HDAC1-204ENST00000471488 FRAT2O75474 233 aaPredicted RBP8.79□□□□□ -1
HDAC1-204ENST00000471488 IGKV5-2P06315 115 aa8.79□□□□□ -1
HDAC1-204ENST00000471488 OSBPP22059 807 aa8.79□□□□□ -1
HDAC1-204ENST00000471488 HOXD10P28358 340 aa8.79□□□□□ -1
HDAC1-204ENST00000471488 CHAF1AQ13111 956 aaPredicted RBP8.79□□□□□ -1
HDAC1-204ENST00000471488 SNAPC2Q13487 334 aa8.79□□□□□ -1
HDAC1-204ENST00000471488 MFSD14BQ5SR56 506 aa8.79□□□□□ -1
HDAC1-204ENST00000471488 KSR2Q6VAB6 950 aa8.79□□□□□ -1
HDAC1-204ENST00000471488 Q7L0L9 218 aa8.79□□□□□ -1
HDAC1-204ENST00000471488 C8orf58Q8NAV2 365 aa8.79□□□□□ -1
HDAC1-204ENST00000471488 MTMR14Q8NCE2 650 aa8.79□□□□□ -1
HDAC1-204ENST00000471488 ZNF646O15015 1829 aaPredicted RBP8.79□□□□□ -1
HDAC1-204ENST00000471488 NEURL1BA8MQ27 555 aa8.78□□□□□ -1
HDAC1-204ENST00000471488 ZBTB7BO15156 539 aaPredicted RBP8.78□□□□□ -1
HDAC1-204ENST00000471488 PRMT2P55345 433 aa8.78□□□□□ -1
HDAC1-204ENST00000471488 GNAI1P63096 354 aa8.78□□□□□ -1
HDAC1-204ENST00000471488 IFIT5Q13325 482 aaKnown RBP8.78□□□□□ -1
HDAC1-204ENST00000471488 SPDYE2Q495Y8 402 aa8.78□□□□□ -1
HDAC1-204ENST00000471488 DZIP1LQ8IYY4 767 aaKnown RBP8.78□□□□□ -1
HDAC1-204ENST00000471488 DEFB123Q8N688 67 aa8.78□□□□□ -1
HDAC1-204ENST00000471488 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.78□□□□□ -1
HDAC1-204ENST00000471488 UNC93B1Q9H1C4 597 aa8.78□□□□□ -1
HDAC1-204ENST00000471488 CNNM1Q9NRU3 951 aa8.78□□□□□ -1
HDAC1-204ENST00000471488 TMOD2Q9NZR1 351 aa8.78□□□□□ -1
HDAC1-204ENST00000471488 SRRDQ9UH36 339 aa8.78□□□□□ -1
HDAC1-204ENST00000471488 IQSEC3Q9UPP2 1182 aaPredicted RBP8.78□□□□□ -1
HDAC1-204ENST00000471488 MYH3P11055 1940 aa8.78□□□□□ -1
HDAC1-204ENST00000471488 ECM29Q5VYK3 1845 aa8.77□□□□□ -1
HDAC1-204ENST00000471488 PDHXO00330 501 aa8.77□□□□□ -1.01
HDAC1-204ENST00000471488 IRF6O14896 467 aa8.77□□□□□ -1.01
HDAC1-204ENST00000471488 GNRH1P01148 92 aa8.77□□□□□ -1.01
HDAC1-204ENST00000471488 CRKP46108 304 aa8.77□□□□□ -1.01
HDAC1-204ENST00000471488 GYG1P46976 350 aa8.77□□□□□ -1.01
HDAC1-204ENST00000471488 GJA8P48165 433 aa8.77□□□□□ -1.01
HDAC1-204ENST00000471488 PRKCZQ05513 592 aa8.77□□□□□ -1.01
HDAC1-204ENST00000471488 MIGA2Q7L4E1 593 aa8.77□□□□□ -1.01
HDAC1-204ENST00000471488 VPS37DQ86XT2 251 aa8.77□□□□□ -1.01
HDAC1-204ENST00000471488 ERO1BQ86YB8 467 aa8.77□□□□□ -1.01
HDAC1-204ENST00000471488 C7orf61Q8IZ16 206 aa8.77□□□□□ -1.01
HDAC1-204ENST00000471488 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.77□□□□□ -1.01
HDAC1-204ENST00000471488 U2AF1L4Q8WU68 220 aaKnown RBP8.77□□□□□ -1.01
HDAC1-204ENST00000471488 ZNF594Q96JF6 807 aaPredicted RBP8.77□□□□□ -1.01
HDAC1-204ENST00000471488 ZMYND8Q9ULU4 1186 aaPredicted RBP8.77□□□□□ -1.01
HDAC1-204ENST00000471488 SNCAIPQ9Y6H5 919 aa8.77□□□□□ -1.01
HDAC1-204ENST00000471488 SPDYE5A6NIY4 337 aa8.76□□□□□ -1.01
HDAC1-204ENST00000471488 H7C1W4 665 aa8.76□□□□□ -1.01
HDAC1-204ENST00000471488 GJB1P08034 283 aa8.76□□□□□ -1.01
HDAC1-204ENST00000471488 IL1R1P14778 569 aa8.76□□□□□ -1.01
HDAC1-204ENST00000471488 ELNP15502 786 aa8.76□□□□□ -1.01
HDAC1-204ENST00000471488 SYN1P17600 705 aa8.76□□□□□ -1.01
HDAC1-204ENST00000471488 CTGFP29279 349 aa8.76□□□□□ -1.01
HDAC1-204ENST00000471488 MNX1P50219 401 aaPredicted RBP8.76□□□□□ -1.01
HDAC1-204ENST00000471488 FCGRTP55899 365 aa8.76□□□□□ -1.01
HDAC1-204ENST00000471488 CALD1Q05682 793 aaKnown RBP8.76□□□□□ -1.01
HDAC1-204ENST00000471488 GCKRQ14397 625 aa8.76□□□□□ -1.01
HDAC1-204ENST00000471488 LDHAL6AQ6ZMR3 332 aa8.76□□□□□ -1.01
HDAC1-204ENST00000471488 G2E3Q7L622 706 aa8.76□□□□□ -1.01
HDAC1-204ENST00000471488 TSPYL6Q8N831 410 aa8.76□□□□□ -1.01
HDAC1-204ENST00000471488 TSR2Q969E8 191 aaKnown RBP8.76□□□□□ -1.01
HDAC1-204ENST00000471488 DEFB118Q96PH6 123 aa8.76□□□□□ -1.01
HDAC1-204ENST00000471488 MYH16Q9H6N6 1097 aa8.76□□□□□ -1.01
HDAC1-204ENST00000471488 IFT57Q9NWB7 429 aa8.76□□□□□ -1.01
HDAC1-204ENST00000471488 SERPINA10Q9UK55 444 aa8.76□□□□□ -1.01
HDAC1-204ENST00000471488 ADAMTS8Q9UP79 889 aa8.76□□□□□ -1.01
HDAC1-204ENST00000471488 ADCY3O60266 1144 aa8.75□□□□□ -1.01
HDAC1-204ENST00000471488 SLC4A2P04920 1241 aa8.75□□□□□ -1.01
HDAC1-204ENST00000471488 FKBP5Q13451 457 aaPredicted RBP8.75□□□□□ -1.01
HDAC1-204ENST00000471488 RALBP1Q15311 655 aa8.75□□□□□ -1.01
HDAC1-204ENST00000471488 CCDC57Q2TAC2 916 aa8.75□□□□□ -1.01
HDAC1-204ENST00000471488 TEPSINQ96N21 525 aa8.75□□□□□ -1.01
HDAC1-204ENST00000471488 CHMP4AQ9BY43 222 aa8.75□□□□□ -1.01
HDAC1-204ENST00000471488 GABRQQ9UN88 632 aa8.75□□□□□ -1.01
HDAC1-204ENST00000471488 APAF1O14727 1248 aa8.74□□□□□ -1.01
HDAC1-204ENST00000471488 SGPL1O95470 568 aa8.74□□□□□ -1.01
HDAC1-204ENST00000471488 INHAP05111 366 aa8.74□□□□□ -1.01
HDAC1-204ENST00000471488 CYP2C8P10632 490 aa8.74□□□□□ -1.01
HDAC1-204ENST00000471488 HIBADHP31937 336 aaKnown RBP8.74□□□□□ -1.01
HDAC1-204ENST00000471488 INPP5BP32019 993 aa8.74□□□□□ -1.01
HDAC1-204ENST00000471488 FKBP1AP62942 108 aaKnown RBP8.74□□□□□ -1.01
HDAC1-204ENST00000471488 TCP10Q12799 353 aa8.74□□□□□ -1.01
HDAC1-204ENST00000471488 PPIL2Q13356 520 aa8.74□□□□□ -1.01
HDAC1-204ENST00000471488 DCAF15Q66K64 600 aa8.74□□□□□ -1.01
HDAC1-204ENST00000471488 C17orf99Q6UX52 265 aa8.74□□□□□ -1.01
HDAC1-204ENST00000471488 GADL1Q6ZQY3 521 aa8.74□□□□□ -1.01
HDAC1-204ENST00000471488 SLAIN1Q8ND83 568 aa8.74□□□□□ -1.01
HDAC1-204ENST00000471488 TEKT1Q969V4 418 aa8.74□□□□□ -1.01
HDAC1-204ENST00000471488 PAWRQ96IZ0 340 aaKnown RBP8.74□□□□□ -1.01
HDAC1-204ENST00000471488 COL6A3P12111 3177 aa8.74□□□□□ -1.01
HDAC1-204ENST00000471488 LAMB1P07942 1786 aa8.73□□□□□ -1.01
HDAC1-204ENST00000471488 A0A0C4DFX4 3053 aa8.73□□□□□ -1.01
HDAC1-204ENST00000471488 A0A1W2PPC1 479 aa8.73□□□□□ -1.01
HDAC1-204ENST00000471488 TNPO2O14787 897 aaKnown RBP8.73□□□□□ -1.01
HDAC1-204ENST00000471488 CSF1RP07333 972 aa8.73□□□□□ -1.01
HDAC1-204ENST00000471488 ZEB1P37275 1124 aaPredicted RBP8.73□□□□□ -1.01
HDAC1-204ENST00000471488 GRIK5Q16478 980 aa8.73□□□□□ -1.01
HDAC1-204ENST00000471488 LMBR1LQ6UX01 489 aa8.73□□□□□ -1.01
HDAC1-204ENST00000471488 ANKRD23Q86SG2 305 aa8.73□□□□□ -1.01
HDAC1-204ENST00000471488 DIS3LQ8TF46 1054 aaKnown RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms