RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 KAZALD1Q96I82 304 aa15.87■□□□□ 0.13
NPHP4-207ENST00000470763 PDE11AQ9HCR9 933 aa15.87■□□□□ 0.13
NPHP4-207ENST00000470763 A0A0G2JLW4 131 aa15.87■□□□□ 0.13
NPHP4-207ENST00000470763 ANKRD65E5RJM6 399 aa15.87■□□□□ 0.13
NPHP4-207ENST00000470763 ZNF772Q68DY9 489 aaPredicted RBP15.87■□□□□ 0.13
NPHP4-207ENST00000470763 PDILTQ8N807 584 aa15.87■□□□□ 0.13
NPHP4-207ENST00000470763 MPHOSPH8Q99549 860 aa15.87■□□□□ 0.13
NPHP4-207ENST00000470763 GTF2A1P52655 376 aaPredicted RBP15.86■□□□□ 0.13
NPHP4-207ENST00000470763 KARSQ15046 597 aaKnown RBP15.86■□□□□ 0.13
NPHP4-207ENST00000470763 LEKR1Q6ZMV7 388 aa15.86■□□□□ 0.13
NPHP4-207ENST00000470763 GJB4Q9NTQ9 266 aa15.86■□□□□ 0.13
NPHP4-207ENST00000470763 RTEL1Q9NZ71 1219 aa15.86■□□□□ 0.13
NPHP4-207ENST00000470763 ZNF609O15014 1411 aa15.86■□□□□ 0.13
NPHP4-207ENST00000470763 TOGARAM2Q6ZUX3 1019 aa15.86■□□□□ 0.13
NPHP4-207ENST00000470763 KRT28Q7Z3Y7 464 aa15.86■□□□□ 0.13
NPHP4-207ENST00000470763 DESI2Q9BSY9 194 aa15.86■□□□□ 0.13
NPHP4-207ENST00000470763 SPATA31A3Q5VYP0 1347 aa15.85■□□□□ 0.13
NPHP4-207ENST00000470763 N4BP1O75113 896 aaKnown RBP15.85■□□□□ 0.13
NPHP4-207ENST00000470763 ATL3Q6DD88 541 aa15.85■□□□□ 0.13
NPHP4-207ENST00000470763 IRX2Q9BZI1 471 aaPredicted RBP15.85■□□□□ 0.13
NPHP4-207ENST00000470763 U3KPZ7 1027 aaPredicted RBP15.85■□□□□ 0.13
NPHP4-207ENST00000470763 CARMIL3Q8ND23 1372 aa15.85■□□□□ 0.13
NPHP4-207ENST00000470763 A0A1W2PQ27 194 aa15.85■□□□□ 0.13
NPHP4-207ENST00000470763 A0A1W2PQ64 194 aa15.85■□□□□ 0.13
NPHP4-207ENST00000470763 A0A1W2PQD8 194 aa15.85■□□□□ 0.13
NPHP4-207ENST00000470763 TMEM139Q8IV31 216 aa15.85■□□□□ 0.13
NPHP4-207ENST00000470763 GOLGA1Q92805 767 aa15.85■□□□□ 0.13
NPHP4-207ENST00000470763 SUGCTQ9HAC7 445 aa15.85■□□□□ 0.13
NPHP4-207ENST00000470763 ABCC6O95255 1503 aa15.85■□□□□ 0.13
NPHP4-207ENST00000470763 SPTLC2O15270 562 aa15.85■□□□□ 0.13
NPHP4-207ENST00000470763 DHX8Q14562 1220 aaKnown RBP15.85■□□□□ 0.13
NPHP4-207ENST00000470763 WWC2Q6AWC2 1192 aa15.85■□□□□ 0.13
NPHP4-207ENST00000470763 DHX32Q7L7V1 743 aaKnown RBP15.85■□□□□ 0.13
NPHP4-207ENST00000470763 RABGGTAQ92696 567 aa15.85■□□□□ 0.13
NPHP4-207ENST00000470763 PLEKHG3A1L390 1219 aa15.84■□□□□ 0.13
NPHP4-207ENST00000470763 PFKFB1P16118 471 aa15.84■□□□□ 0.13
NPHP4-207ENST00000470763 MARCKSP29966 332 aaPredicted RBP15.84■□□□□ 0.13
NPHP4-207ENST00000470763 AIMP1Q12904 312 aaKnown RBP15.84■□□□□ 0.13
NPHP4-207ENST00000470763 DDX46Q7L014 1031 aaKnown RBP15.84■□□□□ 0.13
NPHP4-207ENST00000470763 VSTM4Q8IW00 320 aa15.84■□□□□ 0.13
NPHP4-207ENST00000470763 CCDC12Q8WUD4 166 aaPredicted RBP15.84■□□□□ 0.13
NPHP4-207ENST00000470763 TOMM22Q9NS69 142 aa15.84■□□□□ 0.13
NPHP4-207ENST00000470763 PUF60Q9UHX1 559 aaKnown RBP15.84■□□□□ 0.13
NPHP4-207ENST00000470763 ARHGAP6O43182 974 aa15.84■□□□□ 0.13
NPHP4-207ENST00000470763 ADKP55263 362 aaKnown RBP15.84■□□□□ 0.13
NPHP4-207ENST00000470763 NBPF6Q5VWK0 638 aa15.84■□□□□ 0.13
NPHP4-207ENST00000470763 NBPF4Q96M43 638 aa15.84■□□□□ 0.13
NPHP4-207ENST00000470763 BABAM1Q9NWV8 329 aa15.84■□□□□ 0.13
NPHP4-207ENST00000470763 PSD3Q9NYI0 1048 aa15.84■□□□□ 0.13
NPHP4-207ENST00000470763 LAMA4Q16363 1823 aa15.84■□□□□ 0.13
NPHP4-207ENST00000470763 SALL1Q9NSC2 1324 aa15.84■□□□□ 0.13
NPHP4-207ENST00000470763 GRM8O00222 908 aa15.83■□□□□ 0.13
NPHP4-207ENST00000470763 FDPSP14324 419 aaKnown RBP15.83■□□□□ 0.13
NPHP4-207ENST00000470763 TXLNAP40222 546 aa15.83■□□□□ 0.13
NPHP4-207ENST00000470763 RAB11FIP4Q86YS3 637 aa15.83■□□□□ 0.13
NPHP4-207ENST00000470763 KIFC2Q96AC6 838 aa15.83■□□□□ 0.13
NPHP4-207ENST00000470763 BAG1Q99933 345 aaPredicted RBP15.83■□□□□ 0.13
NPHP4-207ENST00000470763 MROH7-TTC4A0A0A0MT08 1334 aa15.83■□□□□ 0.12
NPHP4-207ENST00000470763 PRAMEF22A3QJZ6 481 aa15.83■□□□□ 0.12
NPHP4-207ENST00000470763 IKBKBO14920 756 aa15.83■□□□□ 0.12
NPHP4-207ENST00000470763 PHACTR2O75167 634 aa15.83■□□□□ 0.12
NPHP4-207ENST00000470763 ICE2Q659A1 982 aa15.83■□□□□ 0.12
NPHP4-207ENST00000470763 PACS2Q86VP3 889 aa15.83■□□□□ 0.12
NPHP4-207ENST00000470763 FANCLQ9NW38 375 aa15.83■□□□□ 0.12
NPHP4-207ENST00000470763 PLEKHG2Q9H7P9 1386 aa15.83■□□□□ 0.12
NPHP4-207ENST00000470763 HOXC9P31274 260 aa15.83■□□□□ 0.12
NPHP4-207ENST00000470763 MYL5Q02045 173 aa15.83■□□□□ 0.12
NPHP4-207ENST00000470763 GOLGA6L1Q8N7Z2 621 aa15.83■□□□□ 0.12
NPHP4-207ENST00000470763 PLEKHA4Q9H4M7 779 aa15.83■□□□□ 0.12
NPHP4-207ENST00000470763 GPHNQ9NQX3 736 aaPredicted RBP15.83■□□□□ 0.12
NPHP4-207ENST00000470763 DBNLQ9UJU6 430 aaKnown RBP15.83■□□□□ 0.12
NPHP4-207ENST00000470763 FAN1Q9Y2M0 1017 aa15.83■□□□□ 0.12
NPHP4-207ENST00000470763 CCDC151A5D8V7 595 aa15.82■□□□□ 0.12
NPHP4-207ENST00000470763 MAP2K7O14733 419 aa15.82■□□□□ 0.12
NPHP4-207ENST00000470763 CBFA2T2O43439 604 aa15.82■□□□□ 0.12
NPHP4-207ENST00000470763 PDIA3P30101 505 aaKnown RBP15.82■□□□□ 0.12
NPHP4-207ENST00000470763 PNOCQ13519 176 aa15.82■□□□□ 0.12
NPHP4-207ENST00000470763 KCNG4Q8TDN1 519 aa15.82■□□□□ 0.12
NPHP4-207ENST00000470763 NLRP6P59044 892 aa15.82■□□□□ 0.12
NPHP4-207ENST00000470763 MCMDC2Q4G0Z9 681 aa15.82■□□□□ 0.12
NPHP4-207ENST00000470763 KSR2Q6VAB6 950 aa15.82■□□□□ 0.12
NPHP4-207ENST00000470763 RGS22Q8NE09 1264 aa15.82■□□□□ 0.12
NPHP4-207ENST00000470763 NGLY1Q96IV0 654 aa15.82■□□□□ 0.12
NPHP4-207ENST00000470763 INTS13Q9NVM9 706 aa15.82■□□□□ 0.12
NPHP4-207ENST00000470763 DBF4Q9UBU7 674 aaPredicted RBP15.82■□□□□ 0.12
NPHP4-207ENST00000470763 EP400Q96L91 3159 aa15.82■□□□□ 0.12
NPHP4-207ENST00000470763 NGDNQ8NEJ9 315 aaKnown RBP15.81■□□□□ 0.12
NPHP4-207ENST00000470763 TNS3Q68CZ2 1445 aa15.81■□□□□ 0.12
NPHP4-207ENST00000470763 FCHSD1Q86WN1 690 aa15.81■□□□□ 0.12
NPHP4-207ENST00000470763 IQUBQ8NA54 791 aa15.81■□□□□ 0.12
NPHP4-207ENST00000470763 BTBD11A6QL63 1104 aa15.81■□□□□ 0.12
NPHP4-207ENST00000470763 TFRCP02786 760 aaKnown RBP15.81■□□□□ 0.12
NPHP4-207ENST00000470763 CHMP4BP1P59074 171 aa15.81■□□□□ 0.12
NPHP4-207ENST00000470763 MTF1Q14872 753 aa15.81■□□□□ 0.12
NPHP4-207ENST00000470763 TTC31Q49AM3 519 aaPredicted RBP15.81■□□□□ 0.12
NPHP4-207ENST00000470763 LZTFL1Q9NQ48 299 aa15.81■□□□□ 0.12
NPHP4-207ENST00000470763 WDHD1O75717 1129 aaPredicted RBP15.8■□□□□ 0.12
NPHP4-207ENST00000470763 SKIDA1Q1XH10 827 aa15.8■□□□□ 0.12
NPHP4-207ENST00000470763 MYSM1Q5VVJ2 828 aa15.8■□□□□ 0.12
NPHP4-207ENST00000470763 C8orf76Q96K31 380 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms