RNA–Protein interactions for RNA: ENST00000469535.5

CD46-212, Transcript of CD46 molecule, humanhuman

TSL 1 (best)

Gene CD46, Length 7,826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-212ENST00000469535 PRKAG2Q9UGJ0 569 aa7.97□□□□□ -1.13
CD46-212ENST00000469535 SHTN1A0MZ66 631 aa7.97□□□□□ -1.13
CD46-212ENST00000469535 PSMA7O14818 248 aa7.97□□□□□ -1.13
CD46-212ENST00000469535 NBPF3Q9H094 633 aa7.97□□□□□ -1.13
CD46-212ENST00000469535 ERICH4A6NGS2 130 aa7.97□□□□□ -1.13
CD46-212ENST00000469535 TRIM37O94972 964 aa7.97□□□□□ -1.13
CD46-212ENST00000469535 MCM4P33991 863 aa7.97□□□□□ -1.13
CD46-212ENST00000469535 APOBRQ0VD83 1088 aa7.97□□□□□ -1.13
CD46-212ENST00000469535 WDR44Q5JSH3 913 aa7.97□□□□□ -1.13
CD46-212ENST00000469535 IP6K1Q92551 441 aa7.97□□□□□ -1.13
CD46-212ENST00000469535 TRIM75PA6NK02 468 aa7.97□□□□□ -1.13
CD46-212ENST00000469535 DAPK3O43293 454 aa7.97□□□□□ -1.13
CD46-212ENST00000469535 PDE8AO60658 829 aa7.97□□□□□ -1.13
CD46-212ENST00000469535 DOK7Q18PE1 504 aa7.97□□□□□ -1.13
CD46-212ENST00000469535 ZNF518AQ6AHZ1 1483 aa7.97□□□□□ -1.13
CD46-212ENST00000469535 A1BGP04217 495 aa7.97□□□□□ -1.13
CD46-212ENST00000469535 MCM3P25205 808 aa7.97□□□□□ -1.13
CD46-212ENST00000469535 ZNF594Q96JF6 807 aaPredicted RBP7.97□□□□□ -1.13
CD46-212ENST00000469535 ATF5Q9Y2D1 282 aaPredicted RBP7.97□□□□□ -1.13
CD46-212ENST00000469535 GAS8O95995 478 aa7.96□□□□□ -1.13
CD46-212ENST00000469535 ABL1P00519 1130 aa7.96□□□□□ -1.13
CD46-212ENST00000469535 CCT6AP40227 531 aaKnown RBP7.96□□□□□ -1.13
CD46-212ENST00000469535 RAPGEF1Q13905 1077 aa7.96□□□□□ -1.13
CD46-212ENST00000469535 SMTNP53814 917 aa7.96□□□□□ -1.13
CD46-212ENST00000469535 GTF2IP78347 998 aa7.96□□□□□ -1.13
CD46-212ENST00000469535 MKRN3Q13064 507 aaKnown RBP7.96□□□□□ -1.13
CD46-212ENST00000469535 PUM3Q15397 648 aaKnown RBP7.96□□□□□ -1.13
CD46-212ENST00000469535 RNF187Q5TA31 235 aaPredicted RBP7.96□□□□□ -1.13
CD46-212ENST00000469535 NCAPH2Q6IBW4 605 aa7.96□□□□□ -1.13
CD46-212ENST00000469535 DTHD1Q6ZMT9 781 aa7.96□□□□□ -1.13
CD46-212ENST00000469535 LINS1Q8NG48 757 aa7.96□□□□□ -1.13
CD46-212ENST00000469535 ZSWIM4Q9H7M6 989 aa7.96□□□□□ -1.13
CD46-212ENST00000469535 RNF216Q9NWF9 866 aaPredicted RBP7.96□□□□□ -1.13
CD46-212ENST00000469535 FAM169AQ9Y6X4 670 aa7.96□□□□□ -1.13
CD46-212ENST00000469535 KRT19P08727 400 aa7.96□□□□□ -1.13
CD46-212ENST00000469535 MAPKAPK5Q8IW41 473 aa7.96□□□□□ -1.13
CD46-212ENST00000469535 METTL13Q8N6R0 699 aa7.96□□□□□ -1.13
CD46-212ENST00000469535 PSMC4P43686 418 aa7.96□□□□□ -1.14
CD46-212ENST00000469535 DNM2P50570 870 aa7.96□□□□□ -1.14
CD46-212ENST00000469535 KRT24Q2M2I5 525 aa7.96□□□□□ -1.14
CD46-212ENST00000469535 TXNDC16Q9P2K2 825 aa7.96□□□□□ -1.14
CD46-212ENST00000469535 FRMD4BQ9Y2L6 1034 aa7.96□□□□□ -1.14
CD46-212ENST00000469535 TRPM2O94759 1503 aa7.96□□□□□ -1.14
CD46-212ENST00000469535 CCNT1O60563 726 aaKnown RBP7.96□□□□□ -1.14
CD46-212ENST00000469535 BMS1Q14692 1282 aaKnown RBP7.96□□□□□ -1.14
CD46-212ENST00000469535 CFBP00751 764 aa7.96□□□□□ -1.14
CD46-212ENST00000469535 TGFBRAP1Q8WUH2 860 aa7.96□□□□□ -1.14
CD46-212ENST00000469535 GTF3C6Q969F1 213 aa7.96□□□□□ -1.14
CD46-212ENST00000469535 AS3MTQ9HBK9 375 aa7.96□□□□□ -1.14
CD46-212ENST00000469535 RBM27Q9P2N5 1060 aaKnown RBP7.96□□□□□ -1.14
CD46-212ENST00000469535 CCDC175P0C221 793 aa7.95□□□□□ -1.14
CD46-212ENST00000469535 NCAPG2Q86XI2 1143 aa7.95□□□□□ -1.14
CD46-212ENST00000469535 ZSCAN16Q9H4T2 348 aaPredicted RBP7.95□□□□□ -1.14
CD46-212ENST00000469535 RBM28Q9NW13 759 aaKnown RBP7.95□□□□□ -1.14
CD46-212ENST00000469535 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.95□□□□□ -1.143e-6■■■□□ 15.7
CD46-212ENST00000469535 USP25Q9UHP3 1055 aa7.95□□□□□ -1.14
CD46-212ENST00000469535 SLC1A4P43007 532 aa7.95□□□□□ -1.14
CD46-212ENST00000469535 KIF18AQ8NI77 898 aa7.95□□□□□ -1.14
CD46-212ENST00000469535 STX10O60499 249 aa7.95□□□□□ -1.14
CD46-212ENST00000469535 MXRA7P84157 204 aa7.95□□□□□ -1.14
CD46-212ENST00000469535 ATP8B2P98198 1209 aa7.95□□□□□ -1.14
CD46-212ENST00000469535 WDR66Q8TBY9 1149 aa7.95□□□□□ -1.14
CD46-212ENST00000469535 AGTPBP1Q9UPW5 1226 aa7.95□□□□□ -1.14
CD46-212ENST00000469535 ZNF174Q15697 407 aa7.95□□□□□ -1.14
CD46-212ENST00000469535 ZNF772Q68DY9 489 aaPredicted RBP7.95□□□□□ -1.14
CD46-212ENST00000469535 OTUD7BQ6GQQ9 843 aa7.95□□□□□ -1.14
CD46-212ENST00000469535 MTERF4Q7Z6M4 381 aaKnown RBP7.95□□□□□ -1.14
CD46-212ENST00000469535 USP40Q9NVE5 1235 aa7.95□□□□□ -1.14
CD46-212ENST00000469535 BRPF3Q9ULD4 1205 aa7.95□□□□□ -1.14
CD46-212ENST00000469535 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.95□□□□□ -1.141e-6■■■□□ 14.7
CD46-212ENST00000469535 PRDM1O75626 825 aa7.95□□□□□ -1.14
CD46-212ENST00000469535 SDSP20132 328 aa7.95□□□□□ -1.14
CD46-212ENST00000469535 CDAN1Q8IWY9 1227 aa7.95□□□□□ -1.14
CD46-212ENST00000469535 CCDC65Q8IXS2 484 aa7.95□□□□□ -1.14
CD46-212ENST00000469535 BBXQ8WY36 941 aaPredicted RBP7.95□□□□□ -1.14
CD46-212ENST00000469535 GLG1Q92896 1179 aa7.95□□□□□ -1.14
CD46-212ENST00000469535 TTF2Q9UNY4 1162 aaKnown RBP7.95□□□□□ -1.14
CD46-212ENST00000469535 ATXN8OSP0DMR3 200 aa7.95□□□□□ -1.14
CD46-212ENST00000469535 STX17P56962 302 aa7.95□□□□□ -1.14
CD46-212ENST00000469535 UBASH3AP57075 661 aa7.95□□□□□ -1.14
CD46-212ENST00000469535 FAM182BQ5T319 152 aa7.95□□□□□ -1.14
CD46-212ENST00000469535 ZNF790Q6PG37 636 aa7.95□□□□□ -1.14
CD46-212ENST00000469535 CCDC114Q96M63 670 aa7.95□□□□□ -1.14
CD46-212ENST00000469535 FAM193BQ96PV7 902 aaPredicted RBP7.95□□□□□ -1.14
CD46-212ENST00000469535 SELENOOQ9BVL4 669 aa7.95□□□□□ -1.14
CD46-212ENST00000469535 RASAL2Q9UJF2 1139 aa7.95□□□□□ -1.14
CD46-212ENST00000469535 SCNN1DP51172 638 aa7.94□□□□□ -1.14
CD46-212ENST00000469535 DNAJC10Q8IXB1 793 aa7.94□□□□□ -1.14
CD46-212ENST00000469535 SYCP2Q9BX26 1530 aa7.94□□□□□ -1.14
CD46-212ENST00000469535 ARHGEF35A5YM69 484 aa7.94□□□□□ -1.14
CD46-212ENST00000469535 B4E1Z4 1266 aa7.94□□□□□ -1.14
CD46-212ENST00000469535 TIMM10P62072 90 aa7.94□□□□□ -1.14
CD46-212ENST00000469535 PPP1R21Q6ZMI0 780 aa7.94□□□□□ -1.14
CD46-212ENST00000469535 NEK11Q8NG66 645 aa7.94□□□□□ -1.14
CD46-212ENST00000469535 MLXIPQ9HAP2 919 aa7.94□□□□□ -1.14
CD46-212ENST00000469535 ATP6V0A2Q9Y487 856 aa7.94□□□□□ -1.14
CD46-212ENST00000469535 A0A1B0GUL7 405 aa7.94□□□□□ -1.14
CD46-212ENST00000469535 CYLC1P35663 651 aaPredicted RBP7.94□□□□□ -1.14
CD46-212ENST00000469535 IFRD2Q12894 506 aaPredicted RBP7.94□□□□□ -1.14
CD46-212ENST00000469535 CCDC155Q8N6L0 562 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms