RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 RGMBQ6NW40 437 aa17.9■□□□□ 0.46
COL27A1-203ENST00000468565 AIDAQ96BJ3 306 aa17.9■□□□□ 0.46
COL27A1-203ENST00000468565 GNL3LQ9NVN8 582 aaKnown RBP17.9■□□□□ 0.46
COL27A1-203ENST00000468565 PPP2R3BQ9Y5P8 575 aa17.9■□□□□ 0.46
COL27A1-203ENST00000468565 NF2P35240 595 aa17.89■□□□□ 0.45
COL27A1-203ENST00000468565 RBM5P52756 815 aaKnown RBP eCLIP17.89■□□□□ 0.45
COL27A1-203ENST00000468565 CCDC136Q96JN2 1154 aa17.89■□□□□ 0.45
COL27A1-203ENST00000468565 AKAP2Q9Y2D5 859 aa17.89■□□□□ 0.45
COL27A1-203ENST00000468565 SEMA3EO15041 775 aa17.88■□□□□ 0.45
COL27A1-203ENST00000468565 AOC2O75106 756 aa17.88■□□□□ 0.45
COL27A1-203ENST00000468565 NOGQ13253 232 aa17.88■□□□□ 0.45
COL27A1-203ENST00000468565 POLA2Q14181 598 aa17.88■□□□□ 0.45
COL27A1-203ENST00000468565 WDR66Q8TBY9 1149 aa17.88■□□□□ 0.45
COL27A1-203ENST00000468565 MRIQ9BWK5 157 aa17.88■□□□□ 0.45
COL27A1-203ENST00000468565 MAST3O60307 1309 aa17.88■□□□□ 0.45
COL27A1-203ENST00000468565 FOXN1O15353 648 aa17.88■□□□□ 0.45
COL27A1-203ENST00000468565 CRKP46108 304 aa17.88■□□□□ 0.45
COL27A1-203ENST00000468565 ATP8B2P98198 1209 aa17.88■□□□□ 0.45
COL27A1-203ENST00000468565 GRIK5Q16478 980 aa17.88■□□□□ 0.45
COL27A1-203ENST00000468565 CCDC102AQ96A19 550 aa17.88■□□□□ 0.45
COL27A1-203ENST00000468565 DEFB129Q9H1M3 183 aa17.88■□□□□ 0.45
COL27A1-203ENST00000468565 AKAP11Q9UKA4 1901 aa17.87■□□□□ 0.45
COL27A1-203ENST00000468565 TFCP2Q12800 502 aa17.87■□□□□ 0.45
COL27A1-203ENST00000468565 SPDYE2Q495Y8 402 aa17.87■□□□□ 0.45
COL27A1-203ENST00000468565 PRAMEF18Q5VWM3 479 aa17.87■□□□□ 0.45
COL27A1-203ENST00000468565 SSH3Q8TE77 659 aa17.87■□□□□ 0.45
COL27A1-203ENST00000468565 AOX1Q06278 1338 aa17.86■□□□□ 0.45
COL27A1-203ENST00000468565 A0A1B0GUL7 405 aa17.86■□□□□ 0.45
COL27A1-203ENST00000468565 CLRN2A0PK11 232 aa17.86■□□□□ 0.45
COL27A1-203ENST00000468565 FAM155AB1AL88 458 aaPredicted RBP17.86■□□□□ 0.45
COL27A1-203ENST00000468565 ZNF157P51786 506 aaPredicted RBP17.86■□□□□ 0.45
COL27A1-203ENST00000468565 G3BP1Q13283 466 aaKnown RBP eCLIP17.86■□□□□ 0.45
COL27A1-203ENST00000468565 DENND2AQ9ULE3 1009 aa17.86■□□□□ 0.45
COL27A1-203ENST00000468565 ADORA1P30542 326 aa17.86■□□□□ 0.45
COL27A1-203ENST00000468565 CTCFP49711 727 aaPredicted RBP17.86■□□□□ 0.45
COL27A1-203ENST00000468565 PANK1Q8TE04 598 aa17.86■□□□□ 0.45
COL27A1-203ENST00000468565 TEKT1Q969V4 418 aa17.86■□□□□ 0.45
COL27A1-203ENST00000468565 VEZTQ9HBM0 779 aa17.86■□□□□ 0.45
COL27A1-203ENST00000468565 ZNF70Q9UC06 446 aaPredicted RBP17.86■□□□□ 0.45
COL27A1-203ENST00000468565 SALL1Q9NSC2 1324 aa17.85■□□□□ 0.45
COL27A1-203ENST00000468565 MYH2Q9UKX2 1941 aa17.85■□□□□ 0.45
COL27A1-203ENST00000468565 SLC10A3P09131 477 aa17.85■□□□□ 0.45
COL27A1-203ENST00000468565 PHKA1P46020 1223 aa17.85■□□□□ 0.45
COL27A1-203ENST00000468565 TNFAIP1Q13829 316 aa17.85■□□□□ 0.45
COL27A1-203ENST00000468565 CCDC102BQ68D86 513 aa17.85■□□□□ 0.45
COL27A1-203ENST00000468565 C1orf115Q9H7X2 142 aa17.85■□□□□ 0.45
COL27A1-203ENST00000468565 PDS5AQ29RF7 1337 aaKnown RBP17.85■□□□□ 0.45
COL27A1-203ENST00000468565 TIMM10P62072 90 aa17.84■□□□□ 0.45
COL27A1-203ENST00000468565 MVPQ14764 893 aaKnown RBP17.84■□□□□ 0.45
COL27A1-203ENST00000468565 XAGE2Q96GT9 111 aa17.84■□□□□ 0.45
COL27A1-203ENST00000468565 ZDHHC15Q96MV8 337 aa17.84■□□□□ 0.45
COL27A1-203ENST00000468565 BEGAINQ9BUH8 593 aa17.84■□□□□ 0.45
COL27A1-203ENST00000468565 TTLL12Q14166 644 aaPredicted RBP17.84■□□□□ 0.45
COL27A1-203ENST00000468565 HHIPL2Q6UWX4 724 aa17.84■□□□□ 0.45
COL27A1-203ENST00000468565 BCL11AQ9H165 835 aa17.84■□□□□ 0.45
COL27A1-203ENST00000468565 TDRD3Q9H7E2 651 aaKnown RBP17.84■□□□□ 0.45
COL27A1-203ENST00000468565 PRDM10Q9NQV6 1147 aa17.84■□□□□ 0.45
COL27A1-203ENST00000468565 SSC5DA1L4H1 1573 aa17.83■□□□□ 0.45
COL27A1-203ENST00000468565 COL13A1Q5TAT6 717 aaPredicted RBP17.83■□□□□ 0.44
COL27A1-203ENST00000468565 MOB2Q70IA6 237 aa17.83■□□□□ 0.44
COL27A1-203ENST00000468565 ARMC9Q7Z3E5 817 aa17.83■□□□□ 0.44
COL27A1-203ENST00000468565 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.83■□□□□ 0.44
COL27A1-203ENST00000468565 LAMB1P07942 1786 aa17.83■□□□□ 0.44
COL27A1-203ENST00000468565 SUPT20HL1Q3ZLR7 823 aa17.82■□□□□ 0.44
COL27A1-203ENST00000468565 RASAL3Q86YV0 1011 aa17.82■□□□□ 0.44
COL27A1-203ENST00000468565 ZGPATQ8N5A5 531 aaKnown RBP17.82■□□□□ 0.44
COL27A1-203ENST00000468565 GPR108Q9NPR9 543 aa17.82■□□□□ 0.44
COL27A1-203ENST00000468565 NOP58Q9Y2X3 529 aaKnown RBP17.82■□□□□ 0.44
COL27A1-203ENST00000468565 UBE2Q2LH0YL09 131 aa17.82■□□□□ 0.44
COL27A1-203ENST00000468565 CA12O43570 354 aa17.82■□□□□ 0.44
COL27A1-203ENST00000468565 RASA3Q14644 834 aa17.82■□□□□ 0.44
COL27A1-203ENST00000468565 ZIC5Q96T25 663 aa17.82■□□□□ 0.44
COL27A1-203ENST00000468565 DDX19BQ9UMR2 479 aa17.82■□□□□ 0.44
COL27A1-203ENST00000468565 OTOFQ9HC10 1997 aa17.81■□□□□ 0.44
COL27A1-203ENST00000468565 HSPA8P11142 646 aaKnown RBP17.81■□□□□ 0.44
COL27A1-203ENST00000468565 TNNI2P48788 182 aa17.81■□□□□ 0.44
COL27A1-203ENST00000468565 MAP3K11Q16584 847 aa17.81■□□□□ 0.44
COL27A1-203ENST00000468565 CEP85Q6P2H3 762 aa17.81■□□□□ 0.44
COL27A1-203ENST00000468565 NEUROD6Q96NK8 337 aa17.81■□□□□ 0.44
COL27A1-203ENST00000468565 SURF6O75683 361 aaKnown RBP17.8■□□□□ 0.44
COL27A1-203ENST00000468565 LDHBP07195 334 aaKnown RBP17.8■□□□□ 0.44
COL27A1-203ENST00000468565 PRDX5P30044 214 aa17.8■□□□□ 0.44
COL27A1-203ENST00000468565 RASGRF1Q13972 1273 aa17.8■□□□□ 0.44
COL27A1-203ENST00000468565 APOBEC3HQ6NTF7 200 aaKnown RBP17.8■□□□□ 0.44
COL27A1-203ENST00000468565 REM2Q8IYK8 340 aaPredicted RBP17.8■□□□□ 0.44
COL27A1-203ENST00000468565 PPP1R12BO60237 982 aaPredicted RBP17.8■□□□□ 0.44
COL27A1-203ENST00000468565 KIF23Q02241 960 aaPredicted RBP17.8■□□□□ 0.44
COL27A1-203ENST00000468565 OS9Q13438 667 aaPredicted RBP17.8■□□□□ 0.44
COL27A1-203ENST00000468565 LDLRAD1Q5T700 205 aa17.8■□□□□ 0.44
COL27A1-203ENST00000468565 FKBP1CQ5VVH2 108 aa17.8■□□□□ 0.44
COL27A1-203ENST00000468565 ANGEL1Q9UNK9 670 aaKnown RBP17.8■□□□□ 0.44
COL27A1-203ENST00000468565 UNCXA6NJT0 531 aa17.79■□□□□ 0.44
COL27A1-203ENST00000468565 LBX1P52954 281 aa17.79■□□□□ 0.44
COL27A1-203ENST00000468565 NBPF12Q5TAG4 269 aaPredicted RBP17.79■□□□□ 0.44
COL27A1-203ENST00000468565 CHMP4BQ9H444 224 aaKnown RBP17.79■□□□□ 0.44
COL27A1-203ENST00000468565 TMOD2Q9NZR1 351 aa17.79■□□□□ 0.44
COL27A1-203ENST00000468565 AK9Q5TCS8 1911 aa17.78■□□□□ 0.44
COL27A1-203ENST00000468565 TCP10L2B9ZVM9 353 aa17.78■□□□□ 0.44
COL27A1-203ENST00000468565 ARID4AP29374 1257 aaPredicted RBP17.78■□□□□ 0.44
COL27A1-203ENST00000468565 PRKG1Q13976 671 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms